RNA–Protein interactions for RNA: ENST00000607049.5

PKNOX1-210, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-210ENST00000607049 PFASO15067 1338 aa16.91■□□□□ 0.3
PKNOX1-210ENST00000607049 NEDD4P46934 1319 aa16.91■□□□□ 0.3
PKNOX1-210ENST00000607049 SYNGAP1Q96PV0 1343 aa16.91■□□□□ 0.3
PKNOX1-210ENST00000607049 POTEB2H3BUK9 544 aa16.9■□□□□ 0.3
PKNOX1-210ENST00000607049 PRAMEF19Q5SWL8 479 aa16.9■□□□□ 0.3
PKNOX1-210ENST00000607049 SYDE2Q5VT97 1194 aa16.9■□□□□ 0.3
PKNOX1-210ENST00000607049 TRPV1Q8NER1 839 aa16.9■□□□□ 0.3
PKNOX1-210ENST00000607049 ZSCAN10Q96SZ4 725 aaPredicted RBP16.9■□□□□ 0.3
PKNOX1-210ENST00000607049 GPCPD1Q9NPB8 672 aa16.9■□□□□ 0.3
PKNOX1-210ENST00000607049 DNAJC25-GNG10A0A024R161 153 aa16.89■□□□□ 0.29
PKNOX1-210ENST00000607049 B4E1Z4 1266 aa16.89■□□□□ 0.29
PKNOX1-210ENST00000607049 ICAM1P05362 532 aa16.89■□□□□ 0.29
PKNOX1-210ENST00000607049 PDHBP11177 359 aa16.89■□□□□ 0.29
PKNOX1-210ENST00000607049 AKR1A1P14550 325 aa16.89■□□□□ 0.29
PKNOX1-210ENST00000607049 BTNL9Q6UXG8 535 aa16.89■□□□□ 0.29
PKNOX1-210ENST00000607049 RNF180Q86T96 592 aa16.89■□□□□ 0.29
PKNOX1-210ENST00000607049 C7orf61Q8IZ16 206 aa16.89■□□□□ 0.29
PKNOX1-210ENST00000607049 AGBL1Q96MI9 1066 aa16.89■□□□□ 0.29
PKNOX1-210ENST00000607049 ZKSCAN3Q9BRR0 538 aa16.89■□□□□ 0.29
PKNOX1-210ENST00000607049 SENP6Q9GZR1 1112 aaPredicted RBP16.89■□□□□ 0.29
PKNOX1-210ENST00000607049 FAM184BQ9ULE4 1060 aa16.89■□□□□ 0.29
PKNOX1-210ENST00000607049 FRMPD2Q68DX3 1309 aaPredicted RBP16.89■□□□□ 0.29
PKNOX1-210ENST00000607049 PARP14Q460N5 1801 aa16.89■□□□□ 0.29
PKNOX1-210ENST00000607049 ERICH2A1L162 156 aa16.88■□□□□ 0.29
PKNOX1-210ENST00000607049 ASB14A6NK59 587 aa16.88■□□□□ 0.29
PKNOX1-210ENST00000607049 COL6A1P12109 1028 aa16.88■□□□□ 0.29
PKNOX1-210ENST00000607049 SLC16A2P36021 539 aa16.88■□□□□ 0.29
PKNOX1-210ENST00000607049 MNX1P50219 401 aaPredicted RBP16.88■□□□□ 0.29
PKNOX1-210ENST00000607049 ZNF543Q08ER8 600 aa16.88■□□□□ 0.29
PKNOX1-210ENST00000607049 SART3Q15020 963 aaKnown RBP16.88■□□□□ 0.29
PKNOX1-210ENST00000607049 HABP4Q5JVS0 413 aaKnown RBP16.88■□□□□ 0.29
PKNOX1-210ENST00000607049 MAMDC4Q6UXC1 1216 aa16.88■□□□□ 0.29
PKNOX1-210ENST00000607049 RALYLQ86SE5 291 aaKnown RBP16.88■□□□□ 0.29
PKNOX1-210ENST00000607049 PNMA1Q8ND90 353 aa16.88■□□□□ 0.29
PKNOX1-210ENST00000607049 RANBP17Q9H2T7 1088 aaKnown RBP16.88■□□□□ 0.29
PKNOX1-210ENST00000607049 XPNPEP3Q9NQH7 507 aa16.88■□□□□ 0.29
PKNOX1-210ENST00000607049 ZSWIM5Q9P217 1185 aa16.88■□□□□ 0.29
PKNOX1-210ENST00000607049 ZHX1Q9UKY1 873 aaPredicted RBP16.88■□□□□ 0.29
PKNOX1-210ENST00000607049 COL11A1P12107 1806 aaPredicted RBP16.87■□□□□ 0.29
PKNOX1-210ENST00000607049 GJC2Q5T442 439 aaPredicted RBP16.87■□□□□ 0.29
PKNOX1-210ENST00000607049 IFIT1BQ5T764 474 aaKnown RBP16.87■□□□□ 0.29
PKNOX1-210ENST00000607049 CHRDL2Q6WN34 429 aa16.87■□□□□ 0.29
PKNOX1-210ENST00000607049 ANKS1AQ92625 1134 aa16.87■□□□□ 0.29
PKNOX1-210ENST00000607049 MPHOSPH6Q99547 160 aaKnown RBP16.87■□□□□ 0.29
PKNOX1-210ENST00000607049 ABHD16BQ9H3Z7 469 aa16.87■□□□□ 0.29
PKNOX1-210ENST00000607049 SPC25Q9HBM1 224 aa16.87■□□□□ 0.29
PKNOX1-210ENST00000607049 COLQQ9Y215 455 aaPredicted RBP16.87■□□□□ 0.29
PKNOX1-210ENST00000607049 ZNF536O15090 1300 aa16.87■□□□□ 0.29
PKNOX1-210ENST00000607049 TNKSO95271 1327 aa16.87■□□□□ 0.29
PKNOX1-210ENST00000607049 SGSM2O43147 1006 aa16.86■□□□□ 0.29
PKNOX1-210ENST00000607049 NEFLP07196 543 aa16.86■□□□□ 0.29
PKNOX1-210ENST00000607049 SNAP25P60880 206 aa16.86■□□□□ 0.29
PKNOX1-210ENST00000607049 ASPRV1Q53RT3 343 aa16.86■□□□□ 0.29
PKNOX1-210ENST00000607049 ANO1Q5XXA6 986 aa16.86■□□□□ 0.29
PKNOX1-210ENST00000607049 TTBK2Q6IQ55 1244 aa16.86■□□□□ 0.29
PKNOX1-210ENST00000607049 CASC1Q6TDU7 716 aa16.86■□□□□ 0.29
PKNOX1-210ENST00000607049 NSMFQ6X4W1 530 aa16.86■□□□□ 0.29
PKNOX1-210ENST00000607049 A1CFQ9NQ94 594 aaKnown RBP16.86■□□□□ 0.29
PKNOX1-210ENST00000607049 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.86■□□□□ 0.29
PKNOX1-210ENST00000607049 ADD3Q9UEY8 706 aaKnown RBP16.86■□□□□ 0.29
PKNOX1-210ENST00000607049 PRKAG2Q9UGJ0 569 aa16.86■□□□□ 0.29
PKNOX1-210ENST00000607049 DHX16O60231 1041 aaKnown RBP16.85■□□□□ 0.29
PKNOX1-210ENST00000607049 PARP1P09874 1014 aaKnown RBP16.85■□□□□ 0.29
PKNOX1-210ENST00000607049 ZNF865P0CJ78 1059 aaPredicted RBP16.85■□□□□ 0.29
PKNOX1-210ENST00000607049 SNHG28P0DPA3 235 aa16.85■□□□□ 0.29
PKNOX1-210ENST00000607049 ACVR2BQ13705 512 aa16.85■□□□□ 0.29
PKNOX1-210ENST00000607049 RASGRP2Q7LDG7 609 aa16.85■□□□□ 0.29
PKNOX1-210ENST00000607049 ENAHQ8N8S7 591 aaPredicted RBP16.85■□□□□ 0.29
PKNOX1-210ENST00000607049 NCOA7Q8NI08 942 aa16.85■□□□□ 0.29
PKNOX1-210ENST00000607049 CEP290O15078 2479 aa16.85■□□□□ 0.29
PKNOX1-210ENST00000607049 B4DLN1 442 aa16.84■□□□□ 0.29
PKNOX1-210ENST00000607049 MRPL12P52815 198 aaKnown RBP16.84■□□□□ 0.29
PKNOX1-210ENST00000607049 LRRC41Q15345 812 aa16.84■□□□□ 0.29
PKNOX1-210ENST00000607049 ARMCX2Q7L311 632 aa16.84■□□□□ 0.29
PKNOX1-210ENST00000607049 FAM133AQ8N9E0 248 aa16.84■□□□□ 0.29
PKNOX1-210ENST00000607049 CCDC136Q96JN2 1154 aa16.84■□□□□ 0.29
PKNOX1-210ENST00000607049 CYP39A1Q9NYL5 469 aa16.84■□□□□ 0.29
PKNOX1-210ENST00000607049 WDR19Q8NEZ3 1342 aa16.84■□□□□ 0.29
PKNOX1-210ENST00000607049 SNAI1O95863 264 aaPredicted RBP16.83■□□□□ 0.28
PKNOX1-210ENST00000607049 GOLGA8HP0CJ92 632 aa16.83■□□□□ 0.28
PKNOX1-210ENST00000607049 TAL1P17542 331 aaPredicted RBP16.83■□□□□ 0.28
PKNOX1-210ENST00000607049 ATN1P54259 1190 aaPredicted RBP16.83■□□□□ 0.28
PKNOX1-210ENST00000607049 CNTN2Q02246 1040 aa16.83■□□□□ 0.28
PKNOX1-210ENST00000607049 PTH1RQ03431 593 aa16.83■□□□□ 0.28
PKNOX1-210ENST00000607049 NOL8Q76FK4 1167 aaKnown RBP16.83■□□□□ 0.28
PKNOX1-210ENST00000607049 CCDC144CPQ8IYA2 1237 aa16.83■□□□□ 0.28
PKNOX1-210ENST00000607049 IL25Q9H293 177 aa16.83■□□□□ 0.28
PKNOX1-210ENST00000607049 ZMYND8Q9ULU4 1186 aaPredicted RBP16.83■□□□□ 0.28
PKNOX1-210ENST00000607049 LOC102724159A0A0B4J2E5 919 aa16.82■□□□□ 0.28
PKNOX1-210ENST00000607049 A0A1W2PPC1 479 aa16.82■□□□□ 0.28
PKNOX1-210ENST00000607049 PTPDC1A2A3K4 754 aa16.82■□□□□ 0.28
PKNOX1-210ENST00000607049 IFIT3O14879 490 aaKnown RBP16.82■□□□□ 0.28
PKNOX1-210ENST00000607049 DUSP11O75319 330 aaKnown RBP16.82■□□□□ 0.28
PKNOX1-210ENST00000607049 PGK1P00558 417 aa16.82■□□□□ 0.28
PKNOX1-210ENST00000607049 CYP21A2P08686 494 aa16.82■□□□□ 0.28
PKNOX1-210ENST00000607049 ADCYAP1R1P41586 468 aa16.82■□□□□ 0.28
PKNOX1-210ENST00000607049 PWP2Q15269 919 aaKnown RBP16.82■□□□□ 0.28
PKNOX1-210ENST00000607049 LRRC26Q2I0M4 334 aa16.82■□□□□ 0.28
PKNOX1-210ENST00000607049 BMP2KLQ5H9B9 411 aa16.82■□□□□ 0.28
PKNOX1-210ENST00000607049 MUM1L1Q5H9M0 696 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms