RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 WNT7AO00755 349 aa24.66■■□□□ 1.54
USP6NL-204ENST00000606752 ADCY7P51828 1080 aa24.66■■□□□ 1.54
USP6NL-204ENST00000606752 NDUFA8P51970 172 aa24.66■■□□□ 1.54
USP6NL-204ENST00000606752 CDC37Q16543 378 aaPredicted RBP24.66■■□□□ 1.54
USP6NL-204ENST00000606752 MAP3K11Q16584 847 aa24.66■■□□□ 1.54
USP6NL-204ENST00000606752 CLIC6Q96NY7 704 aa24.66■■□□□ 1.54
USP6NL-204ENST00000606752 KINO60870 393 aaKnown RBP24.65■■□□□ 1.54
USP6NL-204ENST00000606752 PRAMEF18Q5VWM3 479 aa24.65■■□□□ 1.54
USP6NL-204ENST00000606752 SHC4Q6S5L8 630 aa24.65■■□□□ 1.54
USP6NL-204ENST00000606752 ZNF579Q8NAF0 562 aaKnown RBP24.65■■□□□ 1.54
USP6NL-204ENST00000606752 GLIS2Q9BZE0 524 aaPredicted RBP24.65■■□□□ 1.54
USP6NL-204ENST00000606752 GRPEL1Q9HAV7 217 aa24.65■■□□□ 1.54
USP6NL-204ENST00000606752 STAT2P52630 851 aa24.65■■□□□ 1.54
USP6NL-204ENST00000606752 RESP18Q5W5W9 173 aa24.65■■□□□ 1.54
USP6NL-204ENST00000606752 CCDC84Q86UT8 332 aaPredicted RBP24.65■■□□□ 1.54
USP6NL-204ENST00000606752 REXO1Q8N1G1 1221 aaKnown RBP24.65■■□□□ 1.54
USP6NL-204ENST00000606752 TSPY26PQ9H489 355 aa24.65■■□□□ 1.54
USP6NL-204ENST00000606752 FAM237AA0A1B0GTK4 181 aa24.64■■□□□ 1.54
USP6NL-204ENST00000606752 INPP5BP32019 993 aa24.64■■□□□ 1.54
USP6NL-204ENST00000606752 SUPT20HL1Q3ZLR7 823 aa24.64■■□□□ 1.54
USP6NL-204ENST00000606752 FAM83BQ5T0W9 1011 aa24.64■■□□□ 1.54
USP6NL-204ENST00000606752 RBM43Q6ZSC3 357 aaKnown RBP24.64■■□□□ 1.54
USP6NL-204ENST00000606752 RIC8AQ9NPQ8 531 aa24.64■■□□□ 1.54
USP6NL-204ENST00000606752 CTAGE5O15320 804 aa24.63■■□□□ 1.53
USP6NL-204ENST00000606752 PFKFB1P16118 471 aa24.63■■□□□ 1.53
USP6NL-204ENST00000606752 NONOQ15233 471 aaKnown RBP eCLIP24.63■■□□□ 1.537e-8■■■■■ 27.1
USP6NL-204ENST00000606752 ZYXQ15942 572 aaKnown RBP24.63■■□□□ 1.53
USP6NL-204ENST00000606752 CHURC1Q8WUH1 139 aa24.63■■□□□ 1.53
USP6NL-204ENST00000606752 PRR12Q9ULL5 1215 aa24.63■■□□□ 1.53
USP6NL-204ENST00000606752 HPSEQ9Y251 543 aa24.63■■□□□ 1.53
USP6NL-204ENST00000606752 PCDHA1Q9Y5I3 950 aa24.63■■□□□ 1.53
USP6NL-204ENST00000606752 GRIN3BO60391 1043 aa24.63■■□□□ 1.53
USP6NL-204ENST00000606752 PLA2G6O60733 806 aa24.63■■□□□ 1.53
USP6NL-204ENST00000606752 MRPL12P52815 198 aaKnown RBP24.63■■□□□ 1.53
USP6NL-204ENST00000606752 ATP2C1P98194 919 aaPredicted RBP24.63■■□□□ 1.53
USP6NL-204ENST00000606752 PTGDRQ13258 359 aa24.63■■□□□ 1.53
USP6NL-204ENST00000606752 INF2Q27J81 1249 aa24.63■■□□□ 1.53
USP6NL-204ENST00000606752 FERMT2Q96AC1 680 aa24.63■■□□□ 1.53
USP6NL-204ENST00000606752 L3MBTL3Q96JM7 780 aaPredicted RBP24.63■■□□□ 1.53
USP6NL-204ENST00000606752 FEZ1Q99689 392 aa24.63■■□□□ 1.53
USP6NL-204ENST00000606752 AMNQ9BXJ7 453 aa24.63■■□□□ 1.53
USP6NL-204ENST00000606752 GLT8D2Q9H1C3 349 aa24.63■■□□□ 1.53
USP6NL-204ENST00000606752 BIN2Q9UBW5 565 aaPredicted RBP24.63■■□□□ 1.53
USP6NL-204ENST00000606752 MCM7P33993 719 aa24.62■■□□□ 1.53
USP6NL-204ENST00000606752 SCYL3Q8IZE3 742 aa24.62■■□□□ 1.53
USP6NL-204ENST00000606752 CUL5Q93034 780 aa24.62■■□□□ 1.53
USP6NL-204ENST00000606752 KIAA1683Q9H0B3 1180 aa24.62■■□□□ 1.53
USP6NL-204ENST00000606752 PSTPIP2Q9H939 334 aa24.62■■□□□ 1.53
USP6NL-204ENST00000606752 ZNF202O95125 648 aa24.61■■□□□ 1.53
USP6NL-204ENST00000606752 DCPSQ96C86 337 aaKnown RBP24.61■■□□□ 1.53
USP6NL-204ENST00000606752 WRNIP1Q96S55 665 aa24.61■■□□□ 1.53
USP6NL-204ENST00000606752 FUCA2Q9BTY2 467 aa24.61■■□□□ 1.53
USP6NL-204ENST00000606752 MRVI1Q9Y6F6 885 aa24.61■■□□□ 1.53
USP6NL-204ENST00000606752 GRIN1Q05586 938 aa24.61■■□□□ 1.53
USP6NL-204ENST00000606752 JAKMIP3Q5VZ66 844 aa24.61■■□□□ 1.53
USP6NL-204ENST00000606752 FAM160B2Q86V87 743 aa24.61■■□□□ 1.53
USP6NL-204ENST00000606752 FBXO11Q86XK2 927 aa24.61■■□□□ 1.53
USP6NL-204ENST00000606752 ZC3H4Q9UPT8 1303 aaKnown RBP24.61■■□□□ 1.53
USP6NL-204ENST00000606752 SYKP43405 635 aa24.6■■□□□ 1.53
USP6NL-204ENST00000606752 CKAP2LQ8IYA6 745 aa24.6■■□□□ 1.53
USP6NL-204ENST00000606752 LPAR1Q92633 364 aa24.6■■□□□ 1.53
USP6NL-204ENST00000606752 KLRG1Q96E93 195 aa24.6■■□□□ 1.53
USP6NL-204ENST00000606752 RBSNQ9H1K0 784 aa24.6■■□□□ 1.53
USP6NL-204ENST00000606752 FEM1BQ9UK73 627 aa24.6■■□□□ 1.53
USP6NL-204ENST00000606752 XRCC6P12956 609 aaKnown RBP eCLIP24.59■■□□□ 1.53
USP6NL-204ENST00000606752 SNAP25P60880 206 aa24.59■■□□□ 1.53
USP6NL-204ENST00000606752 CSRNP2Q9H175 543 aa24.59■■□□□ 1.53
USP6NL-204ENST00000606752 TMEM260Q9NX78 707 aa24.59■■□□□ 1.53
USP6NL-204ENST00000606752 FAM13BQ9NYF5 915 aa24.59■■□□□ 1.53
USP6NL-204ENST00000606752 CCDC192P0DO97 292 aa24.58■■□□□ 1.53
USP6NL-204ENST00000606752 CLK2P49760 499 aaKnown RBP24.58■■□□□ 1.53
USP6NL-204ENST00000606752 TRAF1Q13077 416 aa24.58■■□□□ 1.53
USP6NL-204ENST00000606752 ARL6IP4Q66PJ3 421 aaKnown RBP24.58■■□□□ 1.53
USP6NL-204ENST00000606752 NEK8Q86SG6 692 aa24.58■■□□□ 1.53
USP6NL-204ENST00000606752 SULF1Q8IWU6 871 aa24.58■■□□□ 1.53
USP6NL-204ENST00000606752 C4orf32Q8N8J7 132 aa24.58■■□□□ 1.53
USP6NL-204ENST00000606752 TBCKQ8TEA7 893 aa24.58■■□□□ 1.53
USP6NL-204ENST00000606752 ZKSCAN4Q969J2 545 aaPredicted RBP24.58■■□□□ 1.53
USP6NL-204ENST00000606752 TIGD1Q96MW7 591 aa24.58■■□□□ 1.53
USP6NL-204ENST00000606752 SDF4Q9BRK5 362 aa24.58■■□□□ 1.53
USP6NL-204ENST00000606752 WDR18Q9BV38 432 aa24.58■■□□□ 1.53
USP6NL-204ENST00000606752 PICK1Q9NRD5 415 aa24.58■■□□□ 1.53
USP6NL-204ENST00000606752 KCNH3Q9ULD8 1083 aa24.58■■□□□ 1.53
USP6NL-204ENST00000606752 SPECC1Q5M775 1068 aa24.58■■□□□ 1.53
USP6NL-204ENST00000606752 USP50Q70EL3 339 aaPredicted RBP24.58■■□□□ 1.53
USP6NL-204ENST00000606752 GLTPD2A6NH11 291 aa24.57■■□□□ 1.52
USP6NL-204ENST00000606752 WDR46O15213 610 aaKnown RBP24.57■■□□□ 1.52
USP6NL-204ENST00000606752 AS3MTQ9HBK9 375 aa24.57■■□□□ 1.52
USP6NL-204ENST00000606752 ATAD5Q96QE3 1844 aa24.57■■□□□ 1.52
USP6NL-204ENST00000606752 PTPRAP18433 802 aa24.56■■□□□ 1.52
USP6NL-204ENST00000606752 USP14P54578 494 aa24.56■■□□□ 1.52
USP6NL-204ENST00000606752 KIFC2Q96AC6 838 aa24.56■■□□□ 1.52
USP6NL-204ENST00000606752 RANBP17Q9H2T7 1088 aaKnown RBP24.56■■□□□ 1.52
USP6NL-204ENST00000606752 LAD1O00515 517 aa24.56■■□□□ 1.52
USP6NL-204ENST00000606752 ORC2Q13416 577 aaPredicted RBP24.56■■□□□ 1.52
USP6NL-204ENST00000606752 UBE2SQ16763 222 aa24.56■■□□□ 1.52
USP6NL-204ENST00000606752 LETM2Q2VYF4 491 aa24.56■■□□□ 1.52
USP6NL-204ENST00000606752 ZC3H15Q8WU90 426 aaKnown RBP24.56■■□□□ 1.52
USP6NL-204ENST00000606752 FZD1Q9UP38 647 aa24.56■■□□□ 1.52
USP6NL-204ENST00000606752 SSC5DA1L4H1 1573 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms