RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 ERC1Q8IUD2 1116 aa18.51■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 PRPF38AQ8NAV1 312 aaKnown RBP18.51■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 DNAJC2Q99543 621 aaKnown RBP18.51■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 SEZ6LQ9BYH1 1024 aa18.51■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 FBXO40Q9UH90 709 aa18.51■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 MTCH2Q9Y6C9 303 aa18.51■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 ZNF316A6NFI3 1004 aaPredicted RBP18.5■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 GOLIM4O00461 696 aa18.5■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 ZEB2O60315 1214 aa18.5■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 TNFAIP2Q03169 654 aa18.5■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 C12orf60Q5U649 245 aa18.5■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 C16orf86Q6ZW13 317 aa18.5■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 CCDC144CPQ8IYA2 1237 aa18.5■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 NOC4LQ9BVI4 516 aaKnown RBP18.5■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 MYH8P13535 1937 aa18.49■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 CYP2D7A0A087X1C5 515 aa18.49■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 USP17L12C9JPN9 530 aa18.49■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 USP17L21D6R901 530 aa18.49■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 RFXAPO00287 272 aa18.49■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 PRKAB2O43741 272 aa18.49■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 SLC43A3Q8NBI5 491 aa18.49■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 HLA-CQ95604 372 aa18.49■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 NUP88Q99567 741 aaPredicted RBP18.49■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 CERS4Q9HA82 394 aa18.49■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 BDP1A6H8Y1 2624 aa18.49■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 GBF1Q92538 1859 aa18.48■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 TCRBV5S4A2TA0A5A2 114 aa18.48■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 ATP2A1O14983 1001 aa18.48■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 CTAGE5O15320 804 aa18.48■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 B4GALT4O60513 344 aa18.48■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 GPR37L1O60883 481 aa18.48■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 MBD4O95243 580 aa18.48■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 CA3P07451 260 aa18.48■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 POU3F3P20264 500 aaPredicted RBP18.48■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 ZKSCAN2Q63HK3 967 aa18.48■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 TLK2Q86UE8 772 aa18.48■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 AP5M1Q9H0R1 490 aa18.48■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 TRPV6Q9H1D0 765 aa18.48■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 WNT8AQ9H1J5 351 aa18.48■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 RAVER2Q9HCJ3 691 aaKnown RBP18.48■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 TLL1O43897 1013 aa18.47■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 PFKMP08237 780 aa18.47■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 NKX3-2P78367 333 aa18.47■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 FSCN1Q16658 493 aaKnown RBP18.47■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 CHST13Q8NET6 341 aa18.47■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 KIFC2Q96AC6 838 aa18.47■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 SCLYQ96I15 445 aa18.47■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 EXOC6BQ9Y2D4 811 aa18.47■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 CHD7Q9P2D1 2997 aa18.47■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.46■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 FAM86C2PA6NEL3 165 aa18.46■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 F5H6K3 240 aa18.46■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 SMIM22K7EJ46 135 aa18.46■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 ACTN1P12814 892 aa18.46■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 KLRC3Q07444 240 aa18.46■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.46■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 ALYREFQ86V81 257 aaKnown RBP18.46■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 IL1RAPL2Q9NP60 686 aa18.46■□□□□ 0.55
NEDD8-MDP1-204ENST00000605847 REV3LO60673 3130 aa18.45■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 MYO9BQ13459 2157 aa18.45■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 KIF28PB7ZC32 967 aa18.45■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 DEFB128Q7Z7B8 93 aa18.45■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 FTSJ3Q8IY81 847 aaKnown RBP18.45■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 ARNTL2Q8WYA1 636 aa18.45■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 FGD4Q96M96 766 aa18.45■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.45■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 HOMER2Q9NSB8 354 aa18.45■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 ASB14A6NK59 587 aa18.44■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 DYNC1LI2O43237 492 aaPredicted RBP18.44■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 SUPT20HL2P0C7V6 817 aa18.44■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 PSMC6P62333 389 aa18.44■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 TTLL4Q14679 1199 aa18.44■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 HSP90AB4PQ58FF6 505 aa18.44■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 KRT40Q6A162 431 aa18.44■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 ITPRIPQ8IWB1 547 aa18.44■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.44■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 SLC9A7Q96T83 725 aa18.44■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 KATNBL1Q9H079 304 aa18.44■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 BCL11AQ9H165 835 aa18.44■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 SLC38A10Q9HBR0 1119 aa18.44■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 NYAP2Q9P242 653 aa18.44■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 GNEQ9Y223 722 aaKnown RBP18.44■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 SLC4A4Q9Y6R1 1079 aa18.44■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 ASTN1O14525 1302 aa18.44■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 GRIN2DO15399 1336 aa18.44■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 LRRC37A2A6NM11 1700 aa18.43■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 NDUFB10O96000 172 aa18.43■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 IFIT2P09913 472 aaKnown RBP18.43■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 ADD2P35612 726 aa18.43■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 OAZ1P54368 228 aa18.43■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 CNTN2Q02246 1040 aa18.43■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 CLASRPQ8N2M8 674 aaKnown RBP18.43■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 AGBL1Q96MI9 1066 aa18.43■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 MKNK2Q9HBH9 465 aa18.43■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 C11orf16Q9NQ32 467 aa18.43■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 FEM1BQ9UK73 627 aa18.43■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 COG6Q9Y2V7 657 aa18.43■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 CTR9Q6PD62 1173 aa18.42■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 PHOSPHO2Q8TCD6 241 aa18.42■□□□□ 0.54
NEDD8-MDP1-204ENST00000605847 ALDH8A1Q9H2A2 487 aaPredicted RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 202.5 ms