RNA–Protein interactions for RNA: ENST00000604922.1

SH3D19-213, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-213ENST00000604922 PPP1R16BQ96T49 567 aa8.01□□□□□ -1.13
SH3D19-213ENST00000604922 NOL6Q9H6R4 1146 aaKnown RBP8.01□□□□□ -1.13
SH3D19-213ENST00000604922 PCDHB10Q9UN67 800 aa8.01□□□□□ -1.13
SH3D19-213ENST00000604922 H0Y8X5 98 aa8□□□□□ -1.13
SH3D19-213ENST00000604922 PPM1BO75688 479 aa8□□□□□ -1.13
SH3D19-213ENST00000604922 GSTM1P09488 218 aa8□□□□□ -1.13
SH3D19-213ENST00000604922 PDE6BP35913 854 aa8□□□□□ -1.13
SH3D19-213ENST00000604922 VHLLQ6RSH7 139 aa8□□□□□ -1.13
SH3D19-213ENST00000604922 INTS4Q96HW7 963 aaKnown RBP8□□□□□ -1.13
SH3D19-213ENST00000604922 AP5S1Q9NUS5 200 aa8□□□□□ -1.13
SH3D19-213ENST00000604922 WTIPA6NIX2 430 aaPredicted RBP7.99□□□□□ -1.13
SH3D19-213ENST00000604922 CBFA2T2O43439 604 aa7.99□□□□□ -1.13
SH3D19-213ENST00000604922 PPP2R5DQ14738 602 aa7.99□□□□□ -1.13
SH3D19-213ENST00000604922 KIAA1211LQ6NV74 962 aa7.99□□□□□ -1.13
SH3D19-213ENST00000604922 GALNT18Q6P9A2 607 aa7.99□□□□□ -1.13
SH3D19-213ENST00000604922 SYDE1Q6ZW31 735 aaPredicted RBP7.99□□□□□ -1.13
SH3D19-213ENST00000604922 NLRX1Q86UT6 975 aa7.99□□□□□ -1.13
SH3D19-213ENST00000604922 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.99□□□□□ -1.13
SH3D19-213ENST00000604922 CRTAC1Q9NQ79 661 aa7.99□□□□□ -1.13
SH3D19-213ENST00000604922 ERVK13-1Q9NX77 482 aa7.99□□□□□ -1.13
SH3D19-213ENST00000604922 GPR55Q9Y2T6 319 aaPredicted RBP7.99□□□□□ -1.13
SH3D19-213ENST00000604922 TAF6LQ9Y6J9 622 aa7.99□□□□□ -1.13
SH3D19-213ENST00000604922 A0A1W2PQ45 241 aaPredicted RBP7.98□□□□□ -1.13
SH3D19-213ENST00000604922 A0A1W2PQY0 241 aa7.98□□□□□ -1.13
SH3D19-213ENST00000604922 FADS2P1A8MWK0 482 aa7.98□□□□□ -1.13
SH3D19-213ENST00000604922 EPHX1P07099 455 aa7.98□□□□□ -1.13
SH3D19-213ENST00000604922 ARID5AQ03989 594 aa7.98□□□□□ -1.13
SH3D19-213ENST00000604922 TNNI3KQ59H18 835 aa7.98□□□□□ -1.13
SH3D19-213ENST00000604922 SIRT2Q8IXJ6 389 aa7.98□□□□□ -1.13
SH3D19-213ENST00000604922 FAM169BQ8N8A8 192 aa7.98□□□□□ -1.13
SH3D19-213ENST00000604922 ADCY4Q8NFM4 1077 aa7.98□□□□□ -1.13
SH3D19-213ENST00000604922 ZDHHC15Q96MV8 337 aa7.98□□□□□ -1.13
SH3D19-213ENST00000604922 SLC26A8Q96RN1 970 aa7.98□□□□□ -1.13
SH3D19-213ENST00000604922 SLC12A9Q9BXP2 914 aa7.98□□□□□ -1.13
SH3D19-213ENST00000604922 KLHL25Q9H0H3 589 aa7.98□□□□□ -1.13
SH3D19-213ENST00000604922 SUGT1Q9Y2Z0 365 aa7.98□□□□□ -1.13
SH3D19-213ENST00000604922 MRVI1Q9Y6F6 885 aa7.98□□□□□ -1.13
SH3D19-213ENST00000604922 NAT2P11245 290 aa7.97□□□□□ -1.13
SH3D19-213ENST00000604922 NCAPHQ15003 741 aa7.97□□□□□ -1.13
SH3D19-213ENST00000604922 ZNF124Q15973 351 aa7.97□□□□□ -1.13
SH3D19-213ENST00000604922 RTP2Q5QGT7 225 aa7.97□□□□□ -1.13
SH3D19-213ENST00000604922 HLA-DQA1Q5Y7H0 255 aa7.97□□□□□ -1.13
SH3D19-213ENST00000604922 KLHL6Q8WZ60 621 aa7.97□□□□□ -1.13
SH3D19-213ENST00000604922 SHISA4Q96DD7 197 aa7.97□□□□□ -1.13
SH3D19-213ENST00000604922 FGD4Q96M96 766 aa7.97□□□□□ -1.13
SH3D19-213ENST00000604922 A0A1W2PQ27 194 aa7.96□□□□□ -1.14
SH3D19-213ENST00000604922 A0A1W2PQ64 194 aa7.96□□□□□ -1.14
SH3D19-213ENST00000604922 A0A1W2PQC6 194 aa7.96□□□□□ -1.14
SH3D19-213ENST00000604922 A0A1W2PQD8 194 aa7.96□□□□□ -1.14
SH3D19-213ENST00000604922 ANKRD34BA5PLL1 514 aa7.96□□□□□ -1.14
SH3D19-213ENST00000604922 NOTOA8MTQ0 251 aa7.96□□□□□ -1.14
SH3D19-213ENST00000604922 NFIBO00712 420 aa7.96□□□□□ -1.14
SH3D19-213ENST00000604922 CD3EP07766 207 aa7.96□□□□□ -1.14
SH3D19-213ENST00000604922 TMEM253P0C7T8 217 aa7.96□□□□□ -1.14
SH3D19-213ENST00000604922 PNLIPP16233 465 aa7.96□□□□□ -1.14
SH3D19-213ENST00000604922 ARL4AP40617 200 aa7.96□□□□□ -1.14
SH3D19-213ENST00000604922 RAP1GAPP47736 663 aa7.96□□□□□ -1.14
SH3D19-213ENST00000604922 GALK1P51570 392 aa7.96□□□□□ -1.14
SH3D19-213ENST00000604922 HSF5Q4G112 596 aaPredicted RBP7.96□□□□□ -1.14
SH3D19-213ENST00000604922 CYP2R1Q6VVX0 501 aa7.96□□□□□ -1.14
SH3D19-213ENST00000604922 JAMLQ86YT9 394 aa7.96□□□□□ -1.14
SH3D19-213ENST00000604922 OR14I1A6ND48 311 aa7.95□□□□□ -1.14
SH3D19-213ENST00000604922 SMAD7O15105 426 aaKnown RBP7.95□□□□□ -1.14
SH3D19-213ENST00000604922 LAPTM5Q13571 262 aa7.95□□□□□ -1.14
SH3D19-213ENST00000604922 ADGRF1Q5T601 910 aa7.95□□□□□ -1.14
SH3D19-213ENST00000604922 ZNF605Q86T29 641 aa7.95□□□□□ -1.14
SH3D19-213ENST00000604922 SLCO6A1Q86UG4 719 aa7.95□□□□□ -1.14
SH3D19-213ENST00000604922 KCNN1Q92952 543 aa7.95□□□□□ -1.14
SH3D19-213ENST00000604922 FCRL3Q96P31 734 aaPredicted RBP7.95□□□□□ -1.14
SH3D19-213ENST00000604922 APBA2Q99767 749 aa7.95□□□□□ -1.14
SH3D19-213ENST00000604922 TINF2Q9BSI4 451 aa7.95□□□□□ -1.14
SH3D19-213ENST00000604922 ACTR10Q9NZ32 417 aa7.95□□□□□ -1.14
SH3D19-213ENST00000604922 TBC1D8O95759 1140 aa7.94□□□□□ -1.14
SH3D19-213ENST00000604922 DNAJA1P31689 397 aaKnown RBP7.94□□□□□ -1.14
SH3D19-213ENST00000604922 ZNF143P52747 638 aaPredicted RBP7.94□□□□□ -1.14
SH3D19-213ENST00000604922 TMEM132EQ6IEE7 984 aa7.94□□□□□ -1.14
SH3D19-213ENST00000604922 CRACR2BQ8N4Y2 399 aaPredicted RBP7.94□□□□□ -1.14
SH3D19-213ENST00000604922 RCC1LQ96I51 464 aaKnown RBP7.94□□□□□ -1.14
SH3D19-213ENST00000604922 PRKAG3Q9UGI9 489 aa7.94□□□□□ -1.14
SH3D19-213ENST00000604922 CCDC180Q9P1Z9 1646 aa7.93□□□□□ -1.14
SH3D19-213ENST00000604922 DBX1A6NMT0 343 aa7.93□□□□□ -1.14
SH3D19-213ENST00000604922 FGF10O15520 208 aaPredicted RBP7.93□□□□□ -1.14
SH3D19-213ENST00000604922 PEX10O60683 326 aa7.93□□□□□ -1.14
SH3D19-213ENST00000604922 TSPAN15O95858 294 aa7.93□□□□□ -1.14
SH3D19-213ENST00000604922 PRKCAP17252 672 aa7.93□□□□□ -1.14
SH3D19-213ENST00000604922 CYP4F8P98187 520 aa7.93□□□□□ -1.14
SH3D19-213ENST00000604922 AMPD2Q01433 879 aa7.93□□□□□ -1.14
SH3D19-213ENST00000604922 GRB10Q13322 594 aa7.93□□□□□ -1.14
SH3D19-213ENST00000604922 ARHGEF39Q8N4T4 335 aa7.93□□□□□ -1.14
SH3D19-213ENST00000604922 SLC43A3Q8NBI5 491 aa7.93□□□□□ -1.14
SH3D19-213ENST00000604922 TMEM52Q8NDY8 209 aa7.93□□□□□ -1.14
SH3D19-213ENST00000604922 NUP43Q8NFH3 380 aa7.93□□□□□ -1.14
SH3D19-213ENST00000604922 PLCD4Q9BRC7 762 aa7.93□□□□□ -1.14
SH3D19-213ENST00000604922 ZNF552Q9H707 407 aaPredicted RBP7.93□□□□□ -1.14
SH3D19-213ENST00000604922 KCNK12Q9HB15 430 aa7.93□□□□□ -1.14
SH3D19-213ENST00000604922 R3HCC1Q9Y3T6 440 aaKnown RBP7.93□□□□□ -1.14
SH3D19-213ENST00000604922 NOP56O00567 594 aaKnown RBP7.92□□□□□ -1.14
SH3D19-213ENST00000604922 VAMP4O75379 141 aa7.92□□□□□ -1.14
SH3D19-213ENST00000604922 MPOP05164 745 aa7.92□□□□□ -1.14
SH3D19-213ENST00000604922 IFNGR1P15260 489 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms