RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 ENAHQ8N8S7 591 aaPredicted RBP13.53□□□□□ -0.24
CCDC12-209ENST00000604164 ESYT1Q9BSJ8 1104 aa13.53□□□□□ -0.24
CCDC12-209ENST00000604164 DDX20Q9UHI6 824 aaKnown RBP13.53□□□□□ -0.24
CCDC12-209ENST00000604164 CCPG1Q9ULG6 757 aa13.53□□□□□ -0.24
CCDC12-209ENST00000604164 CNPY2Q9Y2B0 182 aa13.53□□□□□ -0.24
CCDC12-209ENST00000604164 RIPK3Q9Y572 518 aa13.53□□□□□ -0.24
CCDC12-209ENST00000604164 TNKSO95271 1327 aa13.53□□□□□ -0.24
CCDC12-209ENST00000604164 CDC45O75419 566 aa13.52□□□□□ -0.25
CCDC12-209ENST00000604164 IGHA2P01877 340 aa13.52□□□□□ -0.25
CCDC12-209ENST00000604164 ICAM1P05362 532 aa13.52□□□□□ -0.25
CCDC12-209ENST00000604164 PGK2P07205 417 aa13.52□□□□□ -0.25
CCDC12-209ENST00000604164 CYBAP13498 195 aa13.52□□□□□ -0.25
CCDC12-209ENST00000604164 RNF20Q5VTR2 975 aa13.52□□□□□ -0.25
CCDC12-209ENST00000604164 CCDC174Q6PII3 467 aa13.52□□□□□ -0.25
CCDC12-209ENST00000604164 DPF3Q92784 378 aa13.52□□□□□ -0.25
CCDC12-209ENST00000604164 CHMP4CQ96CF2 233 aa13.52□□□□□ -0.25
CCDC12-209ENST00000604164 TRERF1Q96PN7 1200 aa13.52□□□□□ -0.25
CCDC12-209ENST00000604164 TINF2Q9BSI4 451 aa13.52□□□□□ -0.25
CCDC12-209ENST00000604164 RANBP17Q9H2T7 1088 aaKnown RBP13.52□□□□□ -0.25
CCDC12-209ENST00000604164 GPCPD1Q9NPB8 672 aa13.52□□□□□ -0.25
CCDC12-209ENST00000604164 HOMER2Q9NSB8 354 aa13.52□□□□□ -0.25
CCDC12-209ENST00000604164 RNF146Q9NTX7 359 aa13.52□□□□□ -0.25
CCDC12-209ENST00000604164 RBM8AQ9Y5S9 174 aaKnown RBP13.52□□□□□ -0.25
CCDC12-209ENST00000604164 FRMPD2Q68DX3 1309 aaPredicted RBP13.52□□□□□ -0.25
CCDC12-209ENST00000604164 SYNGAP1Q96PV0 1343 aa13.52□□□□□ -0.25
CCDC12-209ENST00000604164 DNAJC25-GNG10A0A024R161 153 aa13.51□□□□□ -0.25
CCDC12-209ENST00000604164 E7EWF7 191 aa13.51□□□□□ -0.25
CCDC12-209ENST00000604164 SEPT4O43236 478 aa13.51□□□□□ -0.25
CCDC12-209ENST00000604164 PARP1P09874 1014 aaKnown RBP13.51□□□□□ -0.25
CCDC12-209ENST00000604164 ALAS1P13196 640 aa13.51□□□□□ -0.25
CCDC12-209ENST00000604164 SLC16A2P36021 539 aa13.51□□□□□ -0.25
CCDC12-209ENST00000604164 ARRDC4Q8NCT1 418 aa13.51□□□□□ -0.25
CCDC12-209ENST00000604164 AGBL1Q96MI9 1066 aa13.51□□□□□ -0.25
CCDC12-209ENST00000604164 MTA3Q9BTC8 594 aa13.51□□□□□ -0.25
CCDC12-209ENST00000604164 MAF1Q9H063 256 aa13.51□□□□□ -0.25
CCDC12-209ENST00000604164 ANO2Q9NQ90 1003 aa13.51□□□□□ -0.25
CCDC12-209ENST00000604164 NR2E3Q9Y5X4 410 aa13.51□□□□□ -0.25
CCDC12-209ENST00000604164 ZNF536O15090 1300 aa13.5□□□□□ -0.25
CCDC12-209ENST00000604164 WDR19Q8NEZ3 1342 aa13.5□□□□□ -0.25
CCDC12-209ENST00000604164 POTEB2H3BUK9 544 aa13.5□□□□□ -0.25
CCDC12-209ENST00000604164 IFIT3O14879 490 aaKnown RBP13.5□□□□□ -0.25
CCDC12-209ENST00000604164 LHX8Q68G74 356 aa13.5□□□□□ -0.25
CCDC12-209ENST00000604164 TTBK2Q6IQ55 1244 aa13.5□□□□□ -0.25
CCDC12-209ENST00000604164 MAMDC4Q6UXC1 1216 aa13.5□□□□□ -0.25
CCDC12-209ENST00000604164 PAWRQ96IZ0 340 aaKnown RBP13.5□□□□□ -0.25
CCDC12-209ENST00000604164 LSG1Q9H089 658 aaKnown RBP13.5□□□□□ -0.25
CCDC12-209ENST00000604164 C11orf49Q9H6J7 331 aa13.5□□□□□ -0.25
CCDC12-209ENST00000604164 ASB14A6NK59 587 aa13.49□□□□□ -0.25
CCDC12-209ENST00000604164 TRAF1Q13077 416 aa13.49□□□□□ -0.25
CCDC12-209ENST00000604164 WTAPQ15007 396 aa13.49□□□□□ -0.25
CCDC12-209ENST00000604164 SEC23AQ15436 765 aa13.49□□□□□ -0.25
CCDC12-209ENST00000604164 TMTC2Q8N394 836 aa13.49□□□□□ -0.25
CCDC12-209ENST00000604164 MPHOSPH6Q99547 160 aaKnown RBP13.49□□□□□ -0.25
CCDC12-209ENST00000604164 A1CFQ9NQ94 594 aaKnown RBP13.49□□□□□ -0.25
CCDC12-209ENST00000604164 PPP4R2Q9NY27 417 aa13.49□□□□□ -0.25
CCDC12-209ENST00000604164 LOC102724159A0A0B4J2E5 919 aa13.48□□□□□ -0.25
CCDC12-209ENST00000604164 KBTBD13C9JR72 458 aa13.48□□□□□ -0.25
CCDC12-209ENST00000604164 DNM1LO00429 736 aa13.48□□□□□ -0.25
CCDC12-209ENST00000604164 DHX16O60231 1041 aaKnown RBP13.48□□□□□ -0.25
CCDC12-209ENST00000604164 EVI5O60447 810 aa13.48□□□□□ -0.25
CCDC12-209ENST00000604164 RARBP10826 455 aa13.48□□□□□ -0.25
CCDC12-209ENST00000604164 AKR1A1P14550 325 aa13.48□□□□□ -0.25
CCDC12-209ENST00000604164 MCM5P33992 734 aa13.48□□□□□ -0.25
CCDC12-209ENST00000604164 PWP2Q15269 919 aaKnown RBP13.48□□□□□ -0.25
CCDC12-209ENST00000604164 TMEM67Q5HYA8 995 aa13.48□□□□□ -0.25
CCDC12-209ENST00000604164 CYB5R4Q7L1T6 521 aa13.48□□□□□ -0.25
CCDC12-209ENST00000604164 RASGRP2Q7LDG7 609 aa13.48□□□□□ -0.25
CCDC12-209ENST00000604164 CATIPQ7Z7H3 387 aa13.48□□□□□ -0.25
CCDC12-209ENST00000604164 TRPV1Q8NER1 839 aa13.48□□□□□ -0.25
CCDC12-209ENST00000604164 ABHD16BQ9H3Z7 469 aa13.48□□□□□ -0.25
CCDC12-209ENST00000604164 ADD3Q9UEY8 706 aaKnown RBP13.48□□□□□ -0.25
CCDC12-209ENST00000604164 ZNFX1Q9P2E3 1918 aaKnown RBP13.47□□□□□ -0.25
CCDC12-209ENST00000604164 B4DLN1 442 aa13.47□□□□□ -0.25
CCDC12-209ENST00000604164 GOLGA8HP0CJ92 632 aa13.47□□□□□ -0.25
CCDC12-209ENST00000604164 MRPL12P52815 198 aaKnown RBP13.47□□□□□ -0.25
CCDC12-209ENST00000604164 SNAP25P60880 206 aa13.47□□□□□ -0.25
CCDC12-209ENST00000604164 CREB3L3Q68CJ9 461 aa13.47□□□□□ -0.25
CCDC12-209ENST00000604164 NSMFQ6X4W1 530 aa13.47□□□□□ -0.25
CCDC12-209ENST00000604164 FAM133AQ8N9E0 248 aa13.47□□□□□ -0.25
CCDC12-209ENST00000604164 TMEM87BQ96K49 555 aa13.47□□□□□ -0.25
CCDC12-209ENST00000604164 CYP39A1Q9NYL5 469 aa13.47□□□□□ -0.25
CCDC12-209ENST00000604164 FAM184BQ9ULE4 1060 aa13.47□□□□□ -0.25
CCDC12-209ENST00000604164 ABCB11O95342 1321 aa13.46□□□□□ -0.25
CCDC12-209ENST00000604164 KLRF2D3W0D1 207 aa13.46□□□□□ -0.25
CCDC12-209ENST00000604164 SLC27A2O14975 620 aa13.46□□□□□ -0.25
CCDC12-209ENST00000604164 KRT32Q14532 448 aa13.46□□□□□ -0.25
CCDC12-209ENST00000604164 NECTIN1Q15223 517 aa13.46□□□□□ -0.25
CCDC12-209ENST00000604164 CDC37Q16543 378 aaPredicted RBP13.46□□□□□ -0.25
CCDC12-209ENST00000604164 MUM1L1Q5H9M0 696 aa13.46□□□□□ -0.25
CCDC12-209ENST00000604164 PRAMEF19Q5SWL8 479 aa13.46□□□□□ -0.25
CCDC12-209ENST00000604164 ARMCX2Q7L311 632 aa13.46□□□□□ -0.25
CCDC12-209ENST00000604164 RNF180Q86T96 592 aa13.46□□□□□ -0.25
CCDC12-209ENST00000604164 MB21D2Q8IYB1 491 aaPredicted RBP13.46□□□□□ -0.25
CCDC12-209ENST00000604164 ADGRF4Q8IZF3 695 aa13.46□□□□□ -0.25
CCDC12-209ENST00000604164 RGS22Q8NE09 1264 aa13.46□□□□□ -0.25
CCDC12-209ENST00000604164 DIS3LQ8TF46 1054 aaKnown RBP13.46□□□□□ -0.25
CCDC12-209ENST00000604164 UBA5Q9GZZ9 404 aa13.46□□□□□ -0.25
CCDC12-209ENST00000604164 SPC25Q9HBM1 224 aa13.46□□□□□ -0.25
CCDC12-209ENST00000604164 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.46□□□□□ -0.25
CCDC12-209ENST00000604164 PDE4DIPQ5VU43 2346 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms