RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 ZNF532Q9HCE3 1301 aa10.5□□□□□ -0.73
CSMD1-217ENST00000602723 RPN1P04843 607 aaKnown RBP10.5□□□□□ -0.73
CSMD1-217ENST00000602723 LMNB1P20700 586 aa10.5□□□□□ -0.73
CSMD1-217ENST00000602723 TRIML1Q8N9V2 468 aa10.5□□□□□ -0.73
CSMD1-217ENST00000602723 ZNF594Q96JF6 807 aaPredicted RBP10.5□□□□□ -0.73
CSMD1-217ENST00000602723 PTPN22Q9Y2R2 807 aa10.5□□□□□ -0.73
CSMD1-217ENST00000602723 ECE1P42892 770 aa10.49□□□□□ -0.73
CSMD1-217ENST00000602723 TRIM35Q9UPQ4 493 aa10.49□□□□□ -0.73
CSMD1-217ENST00000602723 NUB1Q9Y5A7 615 aa10.49□□□□□ -0.73
CSMD1-217ENST00000602723 CASP2P42575 452 aa10.49□□□□□ -0.73
CSMD1-217ENST00000602723 FNBP4Q8N3X1 1017 aaPredicted RBP10.49□□□□□ -0.73
CSMD1-217ENST00000602723 PPP1R13BQ96KQ4 1090 aa10.49□□□□□ -0.73
CSMD1-217ENST00000602723 CCDC68Q9H2F9 335 aa10.49□□□□□ -0.73
CSMD1-217ENST00000602723 KLHDC4Q8TBB5 520 aa10.49□□□□□ -0.73
CSMD1-217ENST00000602723 SERTAD1Q9UHV2 236 aa10.49□□□□□ -0.73
CSMD1-217ENST00000602723 PFDN6O15212 129 aa10.49□□□□□ -0.73
CSMD1-217ENST00000602723 RNASELQ05823 741 aaKnown RBP10.49□□□□□ -0.73
CSMD1-217ENST00000602723 KDRP35968 1356 aa10.49□□□□□ -0.73
CSMD1-217ENST00000602723 BRD1O95696 1058 aa10.49□□□□□ -0.73
CSMD1-217ENST00000602723 GARSP41250 739 aaKnown RBP10.49□□□□□ -0.73
CSMD1-217ENST00000602723 FAM102BQ5T8I3 360 aa10.49□□□□□ -0.73
CSMD1-217ENST00000602723 SKA2Q8WVK7 121 aaPredicted RBP10.49□□□□□ -0.73
CSMD1-217ENST00000602723 BIN2Q9UBW5 565 aaPredicted RBP10.49□□□□□ -0.73
CSMD1-217ENST00000602723 NDUFB9Q9Y6M9 179 aa10.49□□□□□ -0.73
CSMD1-217ENST00000602723 BLMP54132 1417 aaPredicted RBP10.49□□□□□ -0.73
CSMD1-217ENST00000602723 CDC25BP30305 580 aa10.49□□□□□ -0.73
CSMD1-217ENST00000602723 HIBADHP31937 336 aaKnown RBP10.49□□□□□ -0.73
CSMD1-217ENST00000602723 YWHAGP61981 247 aaKnown RBP eCLIP10.49□□□□□ -0.73
CSMD1-217ENST00000602723 ZYXQ15942 572 aaKnown RBP10.49□□□□□ -0.73
CSMD1-217ENST00000602723 MYSM1Q5VVJ2 828 aa10.49□□□□□ -0.73
CSMD1-217ENST00000602723 METTL13Q8N6R0 699 aa10.49□□□□□ -0.73
CSMD1-217ENST00000602723 FBXO41Q8TF61 875 aa10.49□□□□□ -0.73
CSMD1-217ENST00000602723 MROH5Q6ZUA9 1318 aa10.49□□□□□ -0.73
CSMD1-217ENST00000602723 K7ENM7 598 aa10.49□□□□□ -0.73
CSMD1-217ENST00000602723 TMTC4Q5T4D3 741 aa10.49□□□□□ -0.73
CSMD1-217ENST00000602723 MED10Q9BTT4 135 aa10.49□□□□□ -0.73
CSMD1-217ENST00000602723 MIS12Q9H081 205 aa10.49□□□□□ -0.73
CSMD1-217ENST00000602723 BZW2Q9Y6E2 419 aaKnown RBP10.49□□□□□ -0.73
CSMD1-217ENST00000602723 IFNAR2P48551 515 aa10.49□□□□□ -0.73
CSMD1-217ENST00000602723 SPZ1Q9BXG8 430 aa10.49□□□□□ -0.73
CSMD1-217ENST00000602723 ANO3Q9BYT9 981 aa10.49□□□□□ -0.73
CSMD1-217ENST00000602723 HAUS4Q9H6D7 363 aa10.49□□□□□ -0.73
CSMD1-217ENST00000602723 CNOT10Q9H9A5 744 aaKnown RBP10.49□□□□□ -0.73
CSMD1-217ENST00000602723 SMYD2Q9NRG4 433 aa10.49□□□□□ -0.73
CSMD1-217ENST00000602723 INTS9Q9NV88 658 aaKnown RBP10.49□□□□□ -0.73
CSMD1-217ENST00000602723 ZKSCAN8Q15776 578 aaPredicted RBP10.48□□□□□ -0.73
CSMD1-217ENST00000602723 TCP11Q8WWU5 503 aa10.48□□□□□ -0.73
CSMD1-217ENST00000602723 FANCLQ9NW38 375 aa10.48□□□□□ -0.73
CSMD1-217ENST00000602723 MAD1L1Q9Y6D9 718 aa10.48□□□□□ -0.73
CSMD1-217ENST00000602723 H7C1D1 291 aa10.48□□□□□ -0.73
CSMD1-217ENST00000602723 S100BP04271 92 aaPredicted RBP10.48□□□□□ -0.73
CSMD1-217ENST00000602723 PBRM1Q86U86 1689 aa10.48□□□□□ -0.73
CSMD1-217ENST00000602723 M0QZ92 97 aa10.48□□□□□ -0.73
CSMD1-217ENST00000602723 RNF8O76064 485 aa10.48□□□□□ -0.73
CSMD1-217ENST00000602723 INHBAP08476 426 aa10.48□□□□□ -0.73
CSMD1-217ENST00000602723 OTUD6AQ7L8S5 288 aa10.48□□□□□ -0.73
CSMD1-217ENST00000602723 PANK4Q9NVE7 773 aa10.48□□□□□ -0.73
CSMD1-217ENST00000602723 GGA1Q9UJY5 639 aa10.48□□□□□ -0.73
CSMD1-217ENST00000602723 MYH6P13533 1939 aa10.48□□□□□ -0.73
CSMD1-217ENST00000602723 URB1O60287 2271 aaKnown RBP10.48□□□□□ -0.73
CSMD1-217ENST00000602723 ITKQ08881 620 aa10.48□□□□□ -0.73
CSMD1-217ENST00000602723 RSBN1LQ6PCB5 846 aaPredicted RBP10.48□□□□□ -0.73
CSMD1-217ENST00000602723 G2E3Q7L622 706 aa10.48□□□□□ -0.73
CSMD1-217ENST00000602723 BFSP1Q12934 665 aa10.48□□□□□ -0.73
CSMD1-217ENST00000602723 HACE1Q8IYU2 909 aa10.48□□□□□ -0.73
CSMD1-217ENST00000602723 CFBP00751 764 aa10.48□□□□□ -0.73
CSMD1-217ENST00000602723 RBM6P78332 1123 aaKnown RBP10.48□□□□□ -0.73
CSMD1-217ENST00000602723 CENPKQ9BS16 269 aa10.48□□□□□ -0.73
CSMD1-217ENST00000602723 SMCO2A6NFE2 343 aa10.48□□□□□ -0.73
CSMD1-217ENST00000602723 EIF3CLB5ME19 914 aaKnown RBP10.48□□□□□ -0.73
CSMD1-217ENST00000602723 KAZNQ674X7 775 aa10.48□□□□□ -0.73
CSMD1-217ENST00000602723 SLFN12Q8IYM2 578 aa10.48□□□□□ -0.73
CSMD1-217ENST00000602723 ZNF654Q8IZM8 581 aa10.48□□□□□ -0.73
CSMD1-217ENST00000602723 EIF3CQ99613 913 aaKnown RBP10.48□□□□□ -0.73
CSMD1-217ENST00000602723 CD2APQ9Y5K6 639 aa10.48□□□□□ -0.73
CSMD1-217ENST00000602723 GPT2Q8TD30 523 aa10.48□□□□□ -0.73
CSMD1-217ENST00000602723 CDKL2Q92772 493 aa10.48□□□□□ -0.73
CSMD1-217ENST00000602723 SCOCQ9UIL1 159 aa10.48□□□□□ -0.73
CSMD1-217ENST00000602723 EPN1Q9Y6I3 576 aaPredicted RBP10.48□□□□□ -0.73
CSMD1-217ENST00000602723 RGS12O14924 1447 aa10.48□□□□□ -0.73
CSMD1-217ENST00000602723 RPSAP08865 295 aaKnown RBP10.48□□□□□ -0.73
CSMD1-217ENST00000602723 LMNB2Q03252 620 aa10.48□□□□□ -0.73
CSMD1-217ENST00000602723 LCA5Q86VQ0 697 aa10.48□□□□□ -0.73
CSMD1-217ENST00000602723 DSCC1Q9BVC3 393 aa10.48□□□□□ -0.73
CSMD1-217ENST00000602723 TM6SF1Q9BZW5 370 aa10.48□□□□□ -0.73
CSMD1-217ENST00000602723 PPME1Q9Y570 386 aa10.48□□□□□ -0.73
CSMD1-217ENST00000602723 NME8Q8N427 588 aa10.47□□□□□ -0.73
CSMD1-217ENST00000602723 DEPTORQ8TB45 409 aa10.47□□□□□ -0.73
CSMD1-217ENST00000602723 PIP4K2CQ8TBX8 421 aa10.47□□□□□ -0.73
CSMD1-217ENST00000602723 PSPC1Q8WXF1 523 aaKnown RBP10.47□□□□□ -0.73
CSMD1-217ENST00000602723 TFCP2L1Q9NZI6 479 aa10.47□□□□□ -0.73
CSMD1-217ENST00000602723 IVNS1ABPQ9Y6Y0 642 aa10.47□□□□□ -0.73
CSMD1-217ENST00000602723 GTPBP6O43824 516 aaPredicted RBP10.47□□□□□ -0.73
CSMD1-217ENST00000602723 OATP04181 439 aa10.47□□□□□ -0.73
CSMD1-217ENST00000602723 EEF1GP26641 437 aaKnown RBP10.47□□□□□ -0.73
CSMD1-217ENST00000602723 NSFP46459 744 aaKnown RBP10.47□□□□□ -0.73
CSMD1-217ENST00000602723 CEBPAP49715 358 aaPredicted RBP10.47□□□□□ -0.73
CSMD1-217ENST00000602723 RASSF7Q02833 373 aa10.47□□□□□ -0.73
CSMD1-217ENST00000602723 ASPHQ12797 758 aa10.47□□□□□ -0.73
CSMD1-217ENST00000602723 TTBK2Q6IQ55 1244 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms