RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 SRCIN1Q9C0H9 1055 aa9.8□□□□□ -0.84
COMMD3-215ENST00000602574 HAUS2Q9NVX0 235 aa9.8□□□□□ -0.84
COMMD3-215ENST00000602574 GTF3C4Q9UKN8 822 aa9.8□□□□□ -0.84
COMMD3-215ENST00000602574 ACAD8Q9UKU7 415 aa9.8□□□□□ -0.84
COMMD3-215ENST00000602574 SAMM50Q9Y512 469 aa9.8□□□□□ -0.84
COMMD3-215ENST00000602574 TET3O43151 1660 aa9.8□□□□□ -0.84
COMMD3-215ENST00000602574 IFT172Q9UG01 1749 aa9.8□□□□□ -0.84
COMMD3-215ENST00000602574 PORP16435 677 aaPredicted RBP9.8□□□□□ -0.84
COMMD3-215ENST00000602574 SFPQP23246 707 aaKnown RBP eCLIP9.8□□□□□ -0.84
COMMD3-215ENST00000602574 VARSP26640 1264 aaKnown RBP9.8□□□□□ -0.84
COMMD3-215ENST00000602574 PEX5P50542 639 aa9.8□□□□□ -0.84
COMMD3-215ENST00000602574 KLC1Q07866 573 aa9.8□□□□□ -0.84
COMMD3-215ENST00000602574 IRF5Q13568 498 aa9.8□□□□□ -0.84
COMMD3-215ENST00000602574 ZMYM1Q5SVZ6 1142 aa9.8□□□□□ -0.84
COMMD3-215ENST00000602574 RNF187Q5TA31 235 aaPredicted RBP9.8□□□□□ -0.84
COMMD3-215ENST00000602574 NLRP9Q7RTR0 991 aa9.8□□□□□ -0.84
COMMD3-215ENST00000602574 DIS3LQ8TF46 1054 aaKnown RBP9.8□□□□□ -0.84
COMMD3-215ENST00000602574 KIFC2Q96AC6 838 aa9.8□□□□□ -0.84
COMMD3-215ENST00000602574 C8orf76Q96K31 380 aa9.8□□□□□ -0.84
COMMD3-215ENST00000602574 CDC5LQ99459 802 aaKnown RBP9.8□□□□□ -0.84
COMMD3-215ENST00000602574 PIDD1Q9HB75 910 aa9.8□□□□□ -0.84
COMMD3-215ENST00000602574 SCHIP1Q9P0W5 487 aaPredicted RBP9.8□□□□□ -0.84
COMMD3-215ENST00000602574 ZC3H13Q5T200 1668 aaKnown RBP9.79□□□□□ -0.84
COMMD3-215ENST00000602574 DEPDC5O75140 1603 aa9.79□□□□□ -0.84
COMMD3-215ENST00000602574 A0A1B0GVL5 298 aa9.79□□□□□ -0.84
COMMD3-215ENST00000602574 POTEFA5A3E0 1075 aa9.79□□□□□ -0.84
COMMD3-215ENST00000602574 E7ENQ6 273 aa9.79□□□□□ -0.84
COMMD3-215ENST00000602574 CHL1O00533 1208 aa9.79□□□□□ -0.84
COMMD3-215ENST00000602574 FANCGO15287 622 aa9.79□□□□□ -0.84
COMMD3-215ENST00000602574 PRPF3O43395 683 aaKnown RBP9.79□□□□□ -0.84
COMMD3-215ENST00000602574 USP46P62068 366 aa9.79□□□□□ -0.84
COMMD3-215ENST00000602574 MSLNQ13421 630 aaPredicted RBP9.79□□□□□ -0.84
COMMD3-215ENST00000602574 ALS2CLQ60I27 953 aa9.79□□□□□ -0.84
COMMD3-215ENST00000602574 Q6ZUG5 572 aa9.79□□□□□ -0.84
COMMD3-215ENST00000602574 DCLK2Q8N568 766 aa9.79□□□□□ -0.84
COMMD3-215ENST00000602574 ZNF473Q8WTR7 871 aaKnown RBP9.79□□□□□ -0.84
COMMD3-215ENST00000602574 COG1Q8WTW3 980 aa9.79□□□□□ -0.84
COMMD3-215ENST00000602574 SCYL1Q96KG9 808 aa9.79□□□□□ -0.84
COMMD3-215ENST00000602574 HAPLN3Q96S86 360 aa9.79□□□□□ -0.84
COMMD3-215ENST00000602574 PNKPQ96T60 521 aa9.79□□□□□ -0.84
COMMD3-215ENST00000602574 HAUS7Q99871 368 aa9.79□□□□□ -0.84
COMMD3-215ENST00000602574 MIS12Q9H081 205 aa9.79□□□□□ -0.84
COMMD3-215ENST00000602574 OCEL1Q9H607 264 aa9.79□□□□□ -0.84
COMMD3-215ENST00000602574 IGSF5Q9NSI5 407 aa9.79□□□□□ -0.84
COMMD3-215ENST00000602574 FKBP14Q9NWM8 211 aa9.79□□□□□ -0.84
COMMD3-215ENST00000602574 DCAF16Q9NXF7 216 aa9.79□□□□□ -0.84
COMMD3-215ENST00000602574 MAP3K20Q9NYL2 800 aaKnown RBP9.79□□□□□ -0.84
COMMD3-215ENST00000602574 NDUFA13Q9P0J0 144 aa9.79□□□□□ -0.84
COMMD3-215ENST00000602574 CHPF2Q9P2E5 772 aa9.79□□□□□ -0.84
COMMD3-215ENST00000602574 FADS3Q9Y5Q0 445 aa9.79□□□□□ -0.84
COMMD3-215ENST00000602574 ABCA6Q8N139 1617 aa9.79□□□□□ -0.84
COMMD3-215ENST00000602574 PPRC1Q5VV67 1664 aaKnown RBP9.79□□□□□ -0.84
COMMD3-215ENST00000602574 FANCAO15360 1455 aa9.79□□□□□ -0.84
COMMD3-215ENST00000602574 ZNF202O95125 648 aa9.79□□□□□ -0.84
COMMD3-215ENST00000602574 ZSCAN22P10073 491 aaPredicted RBP9.79□□□□□ -0.84
COMMD3-215ENST00000602574 CPA3P15088 417 aa9.79□□□□□ -0.84
COMMD3-215ENST00000602574 ZBTB17Q13105 803 aa9.79□□□□□ -0.84
COMMD3-215ENST00000602574 SPCS2Q15005 226 aa9.79□□□□□ -0.84
COMMD3-215ENST00000602574 IFI16Q16666 785 aaKnown RBP9.79□□□□□ -0.84
COMMD3-215ENST00000602574 CFAP100Q494V2 611 aa9.79□□□□□ -0.84
COMMD3-215ENST00000602574 PCNX4Q63HM2 1172 aa9.79□□□□□ -0.84
COMMD3-215ENST00000602574 MSL1Q68DK7 614 aa9.79□□□□□ -0.84
COMMD3-215ENST00000602574 ITPKCQ96DU7 683 aa9.79□□□□□ -0.84
COMMD3-215ENST00000602574 CATSPER2Q96P56 530 aa9.79□□□□□ -0.84
COMMD3-215ENST00000602574 MAP3K14Q99558 947 aa9.79□□□□□ -0.84
COMMD3-215ENST00000602574 PARVBQ9HBI1 364 aa9.79□□□□□ -0.84
COMMD3-215ENST00000602574 GDPD2Q9HCC8 539 aa9.79□□□□□ -0.84
COMMD3-215ENST00000602574 CNPY2Q9Y2B0 182 aa9.79□□□□□ -0.84
COMMD3-215ENST00000602574 PTPRTO14522 1441 aa9.78□□□□□ -0.84
COMMD3-215ENST00000602574 VAMP4O75379 141 aa9.78□□□□□ -0.84
COMMD3-215ENST00000602574 SUPT3HO75486 399 aa9.78□□□□□ -0.84
COMMD3-215ENST00000602574 FAM107AO95990 144 aa9.78□□□□□ -0.84
COMMD3-215ENST00000602574 HNRNPCP07910 306 aaKnown RBP eCLIP9.78□□□□□ -0.84
COMMD3-215ENST00000602574 FUT4P22083 530 aa9.78□□□□□ -0.84
COMMD3-215ENST00000602574 ZNF268Q14587 947 aaPredicted RBP9.78□□□□□ -0.84
COMMD3-215ENST00000602574 ADRM1Q16186 407 aa9.78□□□□□ -0.84
COMMD3-215ENST00000602574 RABL6Q3YEC7 729 aaPredicted RBP9.78□□□□□ -0.84
COMMD3-215ENST00000602574 INTS3Q68E01 1043 aaKnown RBP9.78□□□□□ -0.84
COMMD3-215ENST00000602574 TMC4Q7Z404 712 aa9.78□□□□□ -0.84
COMMD3-215ENST00000602574 CFAP61Q8NHU2 1237 aa9.78□□□□□ -0.84
COMMD3-215ENST00000602574 MAP3K4Q9Y6R4 1608 aa9.78□□□□□ -0.84
COMMD3-215ENST00000602574 CCDC194A0A1B0GVG4 234 aa9.77□□□□□ -0.84
COMMD3-215ENST00000602574 SPDYE5A6NIY4 337 aa9.77□□□□□ -0.84
COMMD3-215ENST00000602574 SP100P23497 879 aaPredicted RBP9.77□□□□□ -0.84
COMMD3-215ENST00000602574 SCTRP47872 440 aa9.77□□□□□ -0.84
COMMD3-215ENST00000602574 BIRC3Q13489 604 aa9.77□□□□□ -0.84
COMMD3-215ENST00000602574 TUBA3CQ13748 450 aa9.77□□□□□ -0.84
COMMD3-215ENST00000602574 DDB1Q16531 1140 aa9.77□□□□□ -0.84
COMMD3-215ENST00000602574 GRAMD4Q6IC98 578 aa9.77□□□□□ -0.84
COMMD3-215ENST00000602574 KLC3Q6P597 504 aa9.77□□□□□ -0.84
COMMD3-215ENST00000602574 PCGF5Q86SE9 256 aa9.77□□□□□ -0.84
COMMD3-215ENST00000602574 CABP7Q86V35 215 aa9.77□□□□□ -0.84
COMMD3-215ENST00000602574 GRAMD2AQ8IUY3 354 aa9.77□□□□□ -0.84
COMMD3-215ENST00000602574 ANKRD44Q8N8A2 993 aa9.77□□□□□ -0.84
COMMD3-215ENST00000602574 SPERTQ8NA61 448 aa9.77□□□□□ -0.84
COMMD3-215ENST00000602574 LINS1Q8NG48 757 aa9.77□□□□□ -0.84
COMMD3-215ENST00000602574 FRS2Q8WU20 508 aa9.77□□□□□ -0.84
COMMD3-215ENST00000602574 SKA1Q96BD8 255 aa9.77□□□□□ -0.84
COMMD3-215ENST00000602574 CLMNQ96JQ2 1002 aa9.77□□□□□ -0.84
COMMD3-215ENST00000602574 RNPC3Q96LT9 517 aaKnown RBP9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms