RNA–Protein interactions for RNA: ENST00000601656.5

FARP1-235, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 806 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-235ENST00000601656 HCN4Q9Y3Q4 1203 aa11.38□□□□□ -0.59
FARP1-235ENST00000601656 MED23Q9ULK4 1368 aa11.38□□□□□ -0.59
FARP1-235ENST00000601656 CLRN2A0PK11 232 aa11.37□□□□□ -0.59
FARP1-235ENST00000601656 MYO1BO43795 1136 aa11.37□□□□□ -0.59
FARP1-235ENST00000601656 TNFRSF21O75509 655 aa11.37□□□□□ -0.59
FARP1-235ENST00000601656 HOXD10P28358 340 aa11.37□□□□□ -0.59
FARP1-235ENST00000601656 UBXN2AP68543 259 aa11.37□□□□□ -0.59
FARP1-235ENST00000601656 TRIM28Q13263 835 aaKnown RBP11.37□□□□□ -0.59
FARP1-235ENST00000601656 TLR1Q15399 786 aa11.37□□□□□ -0.59
FARP1-235ENST00000601656 TAF7LQ5H9L4 462 aa11.37□□□□□ -0.59
FARP1-235ENST00000601656 SH3PXD2AQ5TCZ1 1133 aa11.37□□□□□ -0.59
FARP1-235ENST00000601656 TXNRD3Q86VQ6 643 aa11.37□□□□□ -0.59
FARP1-235ENST00000601656 HOMER1Q86YM7 354 aa11.37□□□□□ -0.59
FARP1-235ENST00000601656 ZBTB38Q8NAP3 1195 aaPredicted RBP11.37□□□□□ -0.59
FARP1-235ENST00000601656 ZDHHC1Q8WTX9 485 aa11.37□□□□□ -0.59
FARP1-235ENST00000601656 HNRNPLLQ8WVV9 542 aaKnown RBP11.37□□□□□ -0.59
FARP1-235ENST00000601656 TRIM47Q96LD4 638 aa11.37□□□□□ -0.59
FARP1-235ENST00000601656 GDF15Q99988 308 aa11.37□□□□□ -0.59
FARP1-235ENST00000601656 PRDM16Q9HAZ2 1276 aa11.37□□□□□ -0.59
FARP1-235ENST00000601656 VEZTQ9HBM0 779 aa11.37□□□□□ -0.59
FARP1-235ENST00000601656 PRKAG3Q9UGI9 489 aa11.37□□□□□ -0.59
FARP1-235ENST00000601656 ZNF232Q9UNY5 417 aa11.37□□□□□ -0.59
FARP1-235ENST00000601656 R3HCC1Q9Y3T6 440 aaKnown RBP11.37□□□□□ -0.59
FARP1-235ENST00000601656 PCDHAC2Q9Y5I4 1007 aa11.37□□□□□ -0.59
FARP1-235ENST00000601656 OTOFQ9HC10 1997 aa11.37□□□□□ -0.59
FARP1-235ENST00000601656 ZNF804BA4D1E1 1349 aa11.36□□□□□ -0.59
FARP1-235ENST00000601656 LILRA1O75019 489 aa11.36□□□□□ -0.59
FARP1-235ENST00000601656 SGPL1O95470 568 aa11.36□□□□□ -0.59
FARP1-235ENST00000601656 PSMC4P43686 418 aa11.36□□□□□ -0.59
FARP1-235ENST00000601656 CCT4P50991 539 aaKnown RBP11.36□□□□□ -0.59
FARP1-235ENST00000601656 LRIT3Q3SXY7 679 aa11.36□□□□□ -0.59
FARP1-235ENST00000601656 XKR5Q6UX68 686 aa11.36□□□□□ -0.59
FARP1-235ENST00000601656 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.36□□□□□ -0.59
FARP1-235ENST00000601656 SMC5Q8IY18 1101 aa11.36□□□□□ -0.59
FARP1-235ENST00000601656 PRMT6Q96LA8 375 aaPredicted RBP11.36□□□□□ -0.59
FARP1-235ENST00000601656 CCDC113Q9H0I3 377 aa11.36□□□□□ -0.59
FARP1-235ENST00000601656 PNNQ9H307 717 aaKnown RBP11.36□□□□□ -0.59
FARP1-235ENST00000601656 MINPP1Q9UNW1 487 aa11.36□□□□□ -0.59
FARP1-235ENST00000601656 ALPK3Q96L96 1907 aa11.36□□□□□ -0.59
FARP1-235ENST00000601656 PDE8AO60658 829 aa11.35□□□□□ -0.59
FARP1-235ENST00000601656 S1PR4O95977 384 aa11.35□□□□□ -0.59
FARP1-235ENST00000601656 TFRCP02786 760 aaKnown RBP11.35□□□□□ -0.59
FARP1-235ENST00000601656 CTGFP29279 349 aa11.35□□□□□ -0.59
FARP1-235ENST00000601656 GYS2P54840 703 aa11.35□□□□□ -0.59
FARP1-235ENST00000601656 NXPE4Q6UWF7 544 aa11.35□□□□□ -0.59
FARP1-235ENST00000601656 SNX29Q8TEQ0 813 aa11.35□□□□□ -0.59
FARP1-235ENST00000601656 JARID2Q92833 1246 aaPredicted RBP11.35□□□□□ -0.59
FARP1-235ENST00000601656 BCO2Q9BYV7 579 aa11.35□□□□□ -0.59
FARP1-235ENST00000601656 PHACTR1Q9C0D0 580 aa11.35□□□□□ -0.59
FARP1-235ENST00000601656 RAB6BQ9NRW1 208 aa11.35□□□□□ -0.59
FARP1-235ENST00000601656 MAPK8IP3Q9UPT6 1336 aa11.35□□□□□ -0.59
FARP1-235ENST00000601656 BTBD19C9JJ37 291 aa11.34□□□□□ -0.59
FARP1-235ENST00000601656 EIF3JO75822 258 aaKnown RBP11.34□□□□□ -0.59
FARP1-235ENST00000601656 IL2RAP01589 272 aa11.34□□□□□ -0.59
FARP1-235ENST00000601656 EIF4A3P38919 411 aaKnown RBP11.34□□□□□ -0.59
FARP1-235ENST00000601656 CFAP100Q494V2 611 aa11.34□□□□□ -0.59
FARP1-235ENST00000601656 C1orf53Q5VUE5 145 aa11.34□□□□□ -0.59
FARP1-235ENST00000601656 C17orf99Q6UX52 265 aa11.34□□□□□ -0.59
FARP1-235ENST00000601656 TICAM2Q86XR7 235 aa11.34□□□□□ -0.59
FARP1-235ENST00000601656 RELL1Q8IUW5 271 aa11.34□□□□□ -0.59
FARP1-235ENST00000601656 FMNL3Q8IVF7 1028 aa11.34□□□□□ -0.59
FARP1-235ENST00000601656 EAF1Q96JC9 268 aaPredicted RBP11.34□□□□□ -0.59
FARP1-235ENST00000601656 GEMIN8Q9NWZ8 242 aaKnown RBP11.34□□□□□ -0.59
FARP1-235ENST00000601656 GABBR1Q9UBS5 961 aa11.34□□□□□ -0.59
FARP1-235ENST00000601656 CPA4Q9UI42 421 aa11.34□□□□□ -0.59
FARP1-235ENST00000601656 FOXD3Q9UJU5 478 aaPredicted RBP11.34□□□□□ -0.59
FARP1-235ENST00000601656 FCF1Q9Y324 198 aaKnown RBP11.34□□□□□ -0.59
FARP1-235ENST00000601656 MSRB2Q9Y3D2 182 aa11.34□□□□□ -0.59
FARP1-235ENST00000601656 HRH3Q9Y5N1 445 aa11.34□□□□□ -0.59
FARP1-235ENST00000601656 SPEF2Q9C093 1822 aa11.34□□□□□ -0.59
FARP1-235ENST00000601656 SPTBN5Q9NRC6 3674 aaKnown RBP11.34□□□□□ -0.59
FARP1-235ENST00000601656 MYPNQ86TC9 1320 aa11.34□□□□□ -0.59
FARP1-235ENST00000601656 F8W031 263 aaPredicted RBP11.33□□□□□ -0.6
FARP1-235ENST00000601656 CETPP11597 493 aa11.33□□□□□ -0.6
FARP1-235ENST00000601656 RBM5P52756 815 aaKnown RBP eCLIP11.33□□□□□ -0.6
FARP1-235ENST00000601656 VGLL4Q14135 290 aa11.33□□□□□ -0.6
FARP1-235ENST00000601656 ZNF598Q86UK7 904 aaKnown RBP11.33□□□□□ -0.6
FARP1-235ENST00000601656 TDHQ8IZJ6 230 aa11.33□□□□□ -0.6
FARP1-235ENST00000601656 LILRB2Q8N423 598 aa11.33□□□□□ -0.6
FARP1-235ENST00000601656 PAWRQ96IZ0 340 aaKnown RBP11.33□□□□□ -0.6
FARP1-235ENST00000601656 CCDC136Q96JN2 1154 aa11.33□□□□□ -0.6
FARP1-235ENST00000601656 CDC5LQ99459 802 aaKnown RBP11.33□□□□□ -0.6
FARP1-235ENST00000601656 NT5C1AQ9BXI3 368 aa11.33□□□□□ -0.6
FARP1-235ENST00000601656 KANSL2Q9H9L4 492 aa11.33□□□□□ -0.6
FARP1-235ENST00000601656 ARHGEF10LQ9HCE6 1279 aa11.33□□□□□ -0.6
FARP1-235ENST00000601656 ZCCHC17Q9NP64 241 aaKnown RBP11.33□□□□□ -0.6
FARP1-235ENST00000601656 BSDC1Q9NW68 430 aaPredicted RBP11.33□□□□□ -0.6
FARP1-235ENST00000601656 BABAM1Q9NWV8 329 aa11.33□□□□□ -0.6
FARP1-235ENST00000601656 ZMYND8Q9ULU4 1186 aaPredicted RBP11.33□□□□□ -0.6
FARP1-235ENST00000601656 LEMD3Q9Y2U8 911 aa11.33□□□□□ -0.6
FARP1-235ENST00000601656 CSADQ9Y600 493 aa11.33□□□□□ -0.6
FARP1-235ENST00000601656 RPTORQ8N122 1335 aa11.33□□□□□ -0.6
FARP1-235ENST00000601656 ESYT3A0FGR9 886 aa11.32□□□□□ -0.6
FARP1-235ENST00000601656 PCCAP05165 728 aaPredicted RBP11.32□□□□□ -0.6
FARP1-235ENST00000601656 GSTT1P30711 240 aa11.32□□□□□ -0.6
FARP1-235ENST00000601656 WDR43Q15061 677 aaKnown RBP eCLIP11.32□□□□□ -0.6
FARP1-235ENST00000601656 KRT24Q2M2I5 525 aa11.32□□□□□ -0.6
FARP1-235ENST00000601656 CCDC146Q8IYE0 955 aa11.32□□□□□ -0.6
FARP1-235ENST00000601656 C7orf61Q8IZ16 206 aa11.32□□□□□ -0.6
FARP1-235ENST00000601656 ZNF295-AS1Q8N0V1 137 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms