RNA–Protein interactions for RNA: ENST00000600475.1

SHD-205, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

TSL 3

Gene SHD, Length 379 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-205ENST00000600475 TEX13BQ9BXU2 312 aa11.78□□□□□ -0.52
SHD-205ENST00000600475 NCOA5Q9HCD5 579 aaKnown RBP11.78□□□□□ -0.52
SHD-205ENST00000600475 VAT1LQ9HCJ6 419 aa11.78□□□□□ -0.52
SHD-205ENST00000600475 SMCHD1A6NHR9 2005 aa11.77□□□□□ -0.52
SHD-205ENST00000600475 CD2BP2O95400 341 aaKnown RBP11.77□□□□□ -0.53
SHD-205ENST00000600475 LARGE1O95461 756 aa11.77□□□□□ -0.53
SHD-205ENST00000600475 ICAM1P05362 532 aa11.77□□□□□ -0.53
SHD-205ENST00000600475 IFNAR1P17181 557 aa11.77□□□□□ -0.53
SHD-205ENST00000600475 CCT2P78371 535 aaKnown RBP11.77□□□□□ -0.53
SHD-205ENST00000600475 CCNA1P78396 465 aa11.77□□□□□ -0.53
SHD-205ENST00000600475 LACTBP83111 547 aaPredicted RBP11.77□□□□□ -0.53
SHD-205ENST00000600475 QRICH1Q2TAL8 776 aa11.77□□□□□ -0.53
SHD-205ENST00000600475 RIOX2Q8IUF8 465 aa11.77□□□□□ -0.53
SHD-205ENST00000600475 CPXCR1Q8N123 301 aa11.77□□□□□ -0.53
SHD-205ENST00000600475 CMTR1Q8N1G2 835 aaKnown RBP11.77□□□□□ -0.53
SHD-205ENST00000600475 ZNF296Q8WUU4 475 aaPredicted RBP11.77□□□□□ -0.53
SHD-205ENST00000600475 ZSCAN31Q96LW9 406 aaPredicted RBP11.77□□□□□ -0.53
SHD-205ENST00000600475 AGBL1Q96MI9 1066 aa11.77□□□□□ -0.53
SHD-205ENST00000600475 PORCNQ9H237 461 aa11.77□□□□□ -0.53
SHD-205ENST00000600475 SLKQ9H2G2 1235 aaPredicted RBP11.77□□□□□ -0.53
SHD-205ENST00000600475 RAVER2Q9HCJ3 691 aaKnown RBP11.77□□□□□ -0.53
SHD-205ENST00000600475 PNMA2Q9UL42 364 aa11.77□□□□□ -0.53
SHD-205ENST00000600475 CTDP1Q9Y5B0 961 aaPredicted RBP11.77□□□□□ -0.53
SHD-205ENST00000600475 DOCK3Q8IZD9 2030 aa11.77□□□□□ -0.53
SHD-205ENST00000600475 COL11A1P12107 1806 aaPredicted RBP11.76□□□□□ -0.53
SHD-205ENST00000600475 PNMA6FA0A0J9YX94 578 aa11.76□□□□□ -0.53
SHD-205ENST00000600475 ZBTB5O15062 677 aa11.76□□□□□ -0.53
SHD-205ENST00000600475 DHX16O60231 1041 aaKnown RBP11.76□□□□□ -0.53
SHD-205ENST00000600475 SLC25A27O95847 323 aa11.76□□□□□ -0.53
SHD-205ENST00000600475 CTGFP29279 349 aa11.76□□□□□ -0.53
SHD-205ENST00000600475 COPB2P35606 906 aa11.76□□□□□ -0.53
SHD-205ENST00000600475 MCM2P49736 904 aa11.76□□□□□ -0.53
SHD-205ENST00000600475 CAP1Q01518 475 aa11.76□□□□□ -0.53
SHD-205ENST00000600475 SCRN1Q12765 414 aa11.76□□□□□ -0.53
SHD-205ENST00000600475 STK3Q13188 491 aa11.76□□□□□ -0.53
SHD-205ENST00000600475 PLS1Q14651 629 aa11.76□□□□□ -0.53
SHD-205ENST00000600475 CDC37Q16543 378 aaPredicted RBP11.76□□□□□ -0.53
SHD-205ENST00000600475 TKFCQ3LXA3 575 aa11.76□□□□□ -0.53
SHD-205ENST00000600475 SNRNP48Q6IEG0 339 aaKnown RBP11.76□□□□□ -0.53
SHD-205ENST00000600475 CCDC174Q6PII3 467 aa11.76□□□□□ -0.53
SHD-205ENST00000600475 NOL8Q76FK4 1167 aaKnown RBP11.76□□□□□ -0.53
SHD-205ENST00000600475 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.76□□□□□ -0.53
SHD-205ENST00000600475 CCDC82Q8N4S0 544 aa11.76□□□□□ -0.53
SHD-205ENST00000600475 GTF3C6Q969F1 213 aa11.76□□□□□ -0.53
SHD-205ENST00000600475 RRP36Q96EU6 259 aaKnown RBP11.76□□□□□ -0.53
SHD-205ENST00000600475 PIGSQ96S52 555 aa11.76□□□□□ -0.53
SHD-205ENST00000600475 MROH8Q9H579 483 aa11.76□□□□□ -0.53
SHD-205ENST00000600475 EFCC1Q9HA90 598 aa11.76□□□□□ -0.53
SHD-205ENST00000600475 SH2B1Q9NRF2 756 aaPredicted RBP11.76□□□□□ -0.53
SHD-205ENST00000600475 RIPK3Q9Y572 518 aa11.76□□□□□ -0.53
SHD-205ENST00000600475 CNTNAP5Q8WYK1 1306 aa11.76□□□□□ -0.53
SHD-205ENST00000600475 PPP1R11O60927 126 aaPredicted RBP11.75□□□□□ -0.53
SHD-205ENST00000600475 ERCC3P19447 782 aa11.75□□□□□ -0.53
SHD-205ENST00000600475 MAPK4P31152 587 aa11.75□□□□□ -0.53
SHD-205ENST00000600475 PSMC4P43686 418 aa11.75□□□□□ -0.53
SHD-205ENST00000600475 LBX1P52954 281 aa11.75□□□□□ -0.53
SHD-205ENST00000600475 ST3GAL1Q11201 340 aa11.75□□□□□ -0.53
SHD-205ENST00000600475 FBXO11Q86XK2 927 aa11.75□□□□□ -0.53
SHD-205ENST00000600475 NECAB1Q8N987 351 aa11.75□□□□□ -0.53
SHD-205ENST00000600475 CHST13Q8NET6 341 aa11.75□□□□□ -0.53
SHD-205ENST00000600475 ERO1AQ96HE7 468 aa11.75□□□□□ -0.53
SHD-205ENST00000600475 TRIM47Q96LD4 638 aa11.75□□□□□ -0.53
SHD-205ENST00000600475 ARHGAP39Q9C0H5 1083 aa11.75□□□□□ -0.53
SHD-205ENST00000600475 CCPG1Q9ULG6 757 aa11.75□□□□□ -0.53
SHD-205ENST00000600475 V9GY48 417 aaPredicted RBP11.75□□□□□ -0.53
SHD-205ENST00000600475 CASP8AP2Q9UKL3 1982 aa11.75□□□□□ -0.53
SHD-205ENST00000600475 CPLX1O14810 134 aa11.74□□□□□ -0.53
SHD-205ENST00000600475 PRPF3O43395 683 aaKnown RBP11.74□□□□□ -0.53
SHD-205ENST00000600475 STRNO43815 780 aa11.74□□□□□ -0.53
SHD-205ENST00000600475 CTDNEP1O95476 244 aa11.74□□□□□ -0.53
SHD-205ENST00000600475 FCGRTP55899 365 aa11.74□□□□□ -0.53
SHD-205ENST00000600475 TRAF1Q13077 416 aa11.74□□□□□ -0.53
SHD-205ENST00000600475 KIF22Q14807 665 aa11.74□□□□□ -0.53
SHD-205ENST00000600475 CPLX2Q6PUV4 134 aaKnown RBP11.74□□□□□ -0.53
SHD-205ENST00000600475 PLEKHH3Q7Z736 793 aa11.74□□□□□ -0.53
SHD-205ENST00000600475 HOMER1Q86YM7 354 aa11.74□□□□□ -0.53
SHD-205ENST00000600475 CD99L2Q8TCZ2 262 aa11.74□□□□□ -0.53
SHD-205ENST00000600475 SNX21Q969T3 373 aa11.74□□□□□ -0.53
SHD-205ENST00000600475 AMNQ9BXJ7 453 aa11.74□□□□□ -0.53
SHD-205ENST00000600475 RNF26Q9BY78 433 aaPredicted RBP11.74□□□□□ -0.53
SHD-205ENST00000600475 RBM27Q9P2N5 1060 aaKnown RBP11.74□□□□□ -0.53
SHD-205ENST00000600475 FBXO40Q9UH90 709 aa11.74□□□□□ -0.53
SHD-205ENST00000600475 hCG_1642624A0A1W2PR95 340 aa11.73□□□□□ -0.53
SHD-205ENST00000600475 SLC15A5A6NIM6 579 aa11.73□□□□□ -0.53
SHD-205ENST00000600475 CDKL5O76039 1030 aa11.73□□□□□ -0.53
SHD-205ENST00000600475 ABCB11O95342 1321 aa11.73□□□□□ -0.53
SHD-205ENST00000600475 GNRH1P01148 92 aa11.73□□□□□ -0.53
SHD-205ENST00000600475 ALAS1P13196 640 aa11.73□□□□□ -0.53
SHD-205ENST00000600475 MYH6P13533 1939 aa11.73□□□□□ -0.53
SHD-205ENST00000600475 TAL1P17542 331 aaPredicted RBP11.73□□□□□ -0.53
SHD-205ENST00000600475 PTPREP23469 700 aa11.73□□□□□ -0.53
SHD-205ENST00000600475 ARHGEF6Q15052 776 aa11.73□□□□□ -0.53
SHD-205ENST00000600475 PKN1Q16512 942 aa11.73□□□□□ -0.53
SHD-205ENST00000600475 MUM1L1Q5H9M0 696 aa11.73□□□□□ -0.53
SHD-205ENST00000600475 GPR142Q7Z601 462 aa11.73□□□□□ -0.53
SHD-205ENST00000600475 NCAPG2Q86XI2 1143 aa11.73□□□□□ -0.53
SHD-205ENST00000600475 CCAR1Q8IX12 1150 aaKnown RBP11.73□□□□□ -0.53
SHD-205ENST00000600475 ABRAQ8N0Z2 381 aa11.73□□□□□ -0.53
SHD-205ENST00000600475 RGS22Q8NE09 1264 aa11.73□□□□□ -0.53
SHD-205ENST00000600475 CLEC4DQ8WXI8 215 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms