RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 TMEM260Q9NX78 707 aa17.3■□□□□ 0.36
HIF3A-218ENST00000600383 POLR2DO15514 142 aaKnown RBP17.29■□□□□ 0.36
HIF3A-218ENST00000600383 ADCY7P51828 1080 aa17.29■□□□□ 0.36
HIF3A-218ENST00000600383 ATP2C1P98194 919 aaPredicted RBP17.29■□□□□ 0.36
HIF3A-218ENST00000600383 FAM177A1Q8N128 213 aaPredicted RBP17.29■□□□□ 0.36
HIF3A-218ENST00000600383 ZNF579Q8NAF0 562 aaKnown RBP17.29■□□□□ 0.36
HIF3A-218ENST00000600383 CNNM3Q8NE01 707 aa17.29■□□□□ 0.36
HIF3A-218ENST00000600383 EPSTI1Q96J88 318 aa17.29■□□□□ 0.36
HIF3A-218ENST00000600383 DEFB129Q9H1M3 183 aa17.29■□□□□ 0.36
HIF3A-218ENST00000600383 ZRSR1Q15695 479 aaKnown RBP17.29■□□□□ 0.36
HIF3A-218ENST00000600383 QRICH1Q2TAL8 776 aa17.29■□□□□ 0.36
HIF3A-218ENST00000600383 KRT25Q7Z3Z0 450 aa17.29■□□□□ 0.36
HIF3A-218ENST00000600383 FERMT2Q96AC1 680 aa17.29■□□□□ 0.36
HIF3A-218ENST00000600383 GMCL1Q96IK5 515 aa17.29■□□□□ 0.36
HIF3A-218ENST00000600383 SYT17Q9BSW7 474 aa17.29■□□□□ 0.36
HIF3A-218ENST00000600383 KIAA1468Q9P260 1216 aa17.29■□□□□ 0.36
HIF3A-218ENST00000600383 FAM237AA0A1B0GTK4 181 aa17.28■□□□□ 0.36
HIF3A-218ENST00000600383 NONOQ15233 471 aaKnown RBP eCLIP17.28■□□□□ 0.36
HIF3A-218ENST00000600383 CDC37Q16543 378 aaPredicted RBP17.28■□□□□ 0.36
HIF3A-218ENST00000600383 LETM2Q2VYF4 491 aa17.28■□□□□ 0.36
HIF3A-218ENST00000600383 FAM200AQ8TCP9 573 aa17.28■□□□□ 0.36
HIF3A-218ENST00000600383 TIGD1Q96MW7 591 aa17.28■□□□□ 0.36
HIF3A-218ENST00000600383 TEPSINQ96N21 525 aa17.28■□□□□ 0.36
HIF3A-218ENST00000600383 ARFGEF1Q9Y6D6 1849 aa17.27■□□□□ 0.36
HIF3A-218ENST00000600383 BIN1O00499 593 aa17.27■□□□□ 0.36
HIF3A-218ENST00000600383 CCNT1O60563 726 aaKnown RBP17.27■□□□□ 0.36
HIF3A-218ENST00000600383 ZNF165P49910 485 aa17.27■□□□□ 0.36
HIF3A-218ENST00000600383 KIAA1755Q5JYT7 1200 aa17.27■□□□□ 0.36
HIF3A-218ENST00000600383 PRAMEF18Q5VWM3 479 aa17.27■□□□□ 0.36
HIF3A-218ENST00000600383 SAMD1Q6SPF0 538 aaPredicted RBP17.27■□□□□ 0.36
HIF3A-218ENST00000600383 LUZP1Q86V48 1076 aa17.27■□□□□ 0.36
HIF3A-218ENST00000600383 TBCKQ8TEA7 893 aa17.27■□□□□ 0.36
HIF3A-218ENST00000600383 GOPCQ9HD26 462 aa17.27■□□□□ 0.36
HIF3A-218ENST00000600383 TMX2Q9Y320 296 aa17.27■□□□□ 0.36
HIF3A-218ENST00000600383 PCDHA1Q9Y5I3 950 aa17.27■□□□□ 0.36
HIF3A-218ENST00000600383 ESYT2A0FGR8 921 aa17.27■□□□□ 0.35
HIF3A-218ENST00000600383 CCDC173Q0VFZ6 552 aa17.27■□□□□ 0.35
HIF3A-218ENST00000600383 UVSSAQ2YD98 709 aa17.27■□□□□ 0.35
HIF3A-218ENST00000600383 ANGEL2Q5VTE6 544 aaKnown RBP17.27■□□□□ 0.35
HIF3A-218ENST00000600383 ISM2Q6H9L7 571 aa17.27■□□□□ 0.35
HIF3A-218ENST00000600383 KRBA2Q6ZNG9 492 aa17.27■□□□□ 0.35
HIF3A-218ENST00000600383 SYMPKQ92797 1274 aaKnown RBP17.27■□□□□ 0.35
HIF3A-218ENST00000600383 MTMR8Q96EF0 704 aa17.27■□□□□ 0.35
HIF3A-218ENST00000600383 GLIS2Q9BZE0 524 aaPredicted RBP17.27■□□□□ 0.35
HIF3A-218ENST00000600383 PSTPIP2Q9H939 334 aa17.27■□□□□ 0.35
HIF3A-218ENST00000600383 ASNSP08243 561 aa17.26■□□□□ 0.35
HIF3A-218ENST00000600383 PNOCQ13519 176 aa17.26■□□□□ 0.35
HIF3A-218ENST00000600383 IL17AQ16552 155 aa17.26■□□□□ 0.35
HIF3A-218ENST00000600383 STX1AQ16623 288 aa17.26■□□□□ 0.35
HIF3A-218ENST00000600383 UBE2SQ16763 222 aa17.26■□□□□ 0.35
HIF3A-218ENST00000600383 NBPF12Q5TAG4 269 aaPredicted RBP17.26■□□□□ 0.35
HIF3A-218ENST00000600383 CBX8Q9HC52 389 aa17.26■□□□□ 0.35
HIF3A-218ENST00000600383 USP25Q9UHP3 1055 aa17.26■□□□□ 0.35
HIF3A-218ENST00000600383 SERTAD1Q9UHV2 236 aa17.26■□□□□ 0.35
HIF3A-218ENST00000600383 EPS15P42566 896 aa17.26■□□□□ 0.35
HIF3A-218ENST00000600383 MAP3K10Q02779 954 aa17.26■□□□□ 0.35
HIF3A-218ENST00000600383 USH1GQ495M9 461 aa17.26■□□□□ 0.35
HIF3A-218ENST00000600383 FAM83BQ5T0W9 1011 aa17.26■□□□□ 0.35
HIF3A-218ENST00000600383 SYDE2Q5VT97 1194 aa17.26■□□□□ 0.35
HIF3A-218ENST00000600383 GPC2Q8N158 579 aa17.26■□□□□ 0.35
HIF3A-218ENST00000600383 TRPM4Q8TD43 1214 aa17.26■□□□□ 0.35
HIF3A-218ENST00000600383 CUL5Q93034 780 aa17.26■□□□□ 0.35
HIF3A-218ENST00000600383 RIC8AQ9NPQ8 531 aa17.26■□□□□ 0.35
HIF3A-218ENST00000600383 GPRC5DQ9NZD1 345 aa17.26■□□□□ 0.35
HIF3A-218ENST00000600383 PHF20L1A8MW92 1017 aa17.25■□□□□ 0.35
HIF3A-218ENST00000600383 MRPL12P52815 198 aaKnown RBP17.25■□□□□ 0.35
HIF3A-218ENST00000600383 C11orf57Q6ZUT1 292 aaPredicted RBP17.25■□□□□ 0.35
HIF3A-218ENST00000600383 NEK8Q86SG6 692 aa17.25■□□□□ 0.35
HIF3A-218ENST00000600383 C4orf32Q8N8J7 132 aa17.25■□□□□ 0.35
HIF3A-218ENST00000600383 DHX58Q96C10 678 aa17.25■□□□□ 0.35
HIF3A-218ENST00000600383 TMEM60Q9H2L4 133 aa17.25■□□□□ 0.35
HIF3A-218ENST00000600383 ANO10Q9NW15 660 aa17.25■□□□□ 0.35
HIF3A-218ENST00000600383 FOXN1O15353 648 aa17.24■□□□□ 0.35
HIF3A-218ENST00000600383 DDNO94850 711 aaPredicted RBP17.24■□□□□ 0.35
HIF3A-218ENST00000600383 CDC25AP30304 524 aa17.24■□□□□ 0.35
HIF3A-218ENST00000600383 STAT2P52630 851 aa17.24■□□□□ 0.35
HIF3A-218ENST00000600383 FEZ1Q99689 392 aa17.24■□□□□ 0.35
HIF3A-218ENST00000600383 MORC2Q9Y6X9 1032 aaPredicted RBP17.24■□□□□ 0.35
HIF3A-218ENST00000600383 USP17L15C9J2P7 530 aa17.24■□□□□ 0.35
HIF3A-218ENST00000600383 USP17L13C9JLJ4 530 aa17.24■□□□□ 0.35
HIF3A-218ENST00000600383 USP17L11C9JVI0 530 aa17.24■□□□□ 0.35
HIF3A-218ENST00000600383 USP17L18D6R9N7 530 aa17.24■□□□□ 0.35
HIF3A-218ENST00000600383 USP17L22D6RA61 530 aa17.24■□□□□ 0.35
HIF3A-218ENST00000600383 USP17L17D6RBQ6 530 aa17.24■□□□□ 0.35
HIF3A-218ENST00000600383 USP17L19D6RCP7 530 aa17.24■□□□□ 0.35
HIF3A-218ENST00000600383 USP17L20D6RJB6 530 aa17.24■□□□□ 0.35
HIF3A-218ENST00000600383 USP17L24Q0WX57 530 aa17.24■□□□□ 0.35
HIF3A-218ENST00000600383 ARL6IP4Q66PJ3 421 aaKnown RBP17.24■□□□□ 0.35
HIF3A-218ENST00000600383 PPP1R18Q6NYC8 613 aa17.24■□□□□ 0.35
HIF3A-218ENST00000600383 USP17L6PQ6QN14 398 aa17.24■□□□□ 0.35
HIF3A-218ENST00000600383 DTHD1Q6ZMT9 781 aa17.24■□□□□ 0.35
HIF3A-218ENST00000600383 TRIM44Q96DX7 344 aaPredicted RBP17.24■□□□□ 0.35
HIF3A-218ENST00000600383 AMNQ9BXJ7 453 aa17.24■□□□□ 0.35
HIF3A-218ENST00000600383 RNF181Q9P0P0 153 aa17.24■□□□□ 0.35
HIF3A-218ENST00000600383 A0A087X0B3 334 aa17.23■□□□□ 0.35
HIF3A-218ENST00000600383 FBXO11Q86XK2 927 aa17.23■□□□□ 0.35
HIF3A-218ENST00000600383 PPP1R9BQ96SB3 815 aa17.23■□□□□ 0.35
HIF3A-218ENST00000600383 ZNF341Q9BYN7 854 aa17.23■□□□□ 0.35
HIF3A-218ENST00000600383 SH2D4AQ9H788 454 aa17.23■□□□□ 0.35
HIF3A-218ENST00000600383 VCPKMTQ9H867 229 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms