RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 GOLGA8AA7E2F4 631 aa19.23■□□□□ 0.67
SHKBP1-219ENST00000599575 TNPO2O14787 897 aaKnown RBP19.23■□□□□ 0.67
SHKBP1-219ENST00000599575 DHX16O60231 1041 aaKnown RBP19.23■□□□□ 0.67
SHKBP1-219ENST00000599575 FMNL1O95466 1100 aaPredicted RBP19.23■□□□□ 0.67
SHKBP1-219ENST00000599575 PDIA3P30101 505 aaKnown RBP19.23■□□□□ 0.67
SHKBP1-219ENST00000599575 PLS1Q14651 629 aa19.23■□□□□ 0.67
SHKBP1-219ENST00000599575 SNRNP48Q6IEG0 339 aaKnown RBP19.23■□□□□ 0.67
SHKBP1-219ENST00000599575 TMTC3Q6ZXV5 915 aa19.23■□□□□ 0.67
SHKBP1-219ENST00000599575 SOCS4Q8WXH5 440 aa19.23■□□□□ 0.67
SHKBP1-219ENST00000599575 MYL10Q9BUA6 226 aa19.23■□□□□ 0.67
SHKBP1-219ENST00000599575 UBA5Q9GZZ9 404 aa19.23■□□□□ 0.67
SHKBP1-219ENST00000599575 JMJD4Q9H9V9 463 aa19.23■□□□□ 0.67
SHKBP1-219ENST00000599575 RBM27Q9P2N5 1060 aaKnown RBP19.23■□□□□ 0.67
SHKBP1-219ENST00000599575 IVNS1ABPQ9Y6Y0 642 aa19.23■□□□□ 0.67
SHKBP1-219ENST00000599575 ZBTB5O15062 677 aa19.22■□□□□ 0.67
SHKBP1-219ENST00000599575 ST18O60284 1047 aa19.22■□□□□ 0.67
SHKBP1-219ENST00000599575 PLEKHH3Q7Z736 793 aa19.22■□□□□ 0.67
SHKBP1-219ENST00000599575 CTU1Q7Z7A3 348 aaKnown RBP19.22■□□□□ 0.67
SHKBP1-219ENST00000599575 CD99L2Q8TCZ2 262 aa19.22■□□□□ 0.67
SHKBP1-219ENST00000599575 TRIM47Q96LD4 638 aa19.22■□□□□ 0.67
SHKBP1-219ENST00000599575 CWC22Q9HCG8 908 aaKnown RBP19.22■□□□□ 0.67
SHKBP1-219ENST00000599575 ZNF536O15090 1300 aa19.22■□□□□ 0.67
SHKBP1-219ENST00000599575 PARP14Q460N5 1801 aa19.21■□□□□ 0.67
SHKBP1-219ENST00000599575 SLC15A5A6NIM6 579 aa19.21■□□□□ 0.67
SHKBP1-219ENST00000599575 ERCC3P19447 782 aa19.21■□□□□ 0.67
SHKBP1-219ENST00000599575 AK2P54819 239 aa19.21■□□□□ 0.67
SHKBP1-219ENST00000599575 CDC37Q16543 378 aaPredicted RBP19.21■□□□□ 0.67
SHKBP1-219ENST00000599575 CPLX2Q6PUV4 134 aaKnown RBP19.21■□□□□ 0.67
SHKBP1-219ENST00000599575 TEX2Q8IWB9 1127 aa19.21■□□□□ 0.67
SHKBP1-219ENST00000599575 CPXCR1Q8N123 301 aa19.21■□□□□ 0.67
SHKBP1-219ENST00000599575 RRP36Q96EU6 259 aaKnown RBP19.21■□□□□ 0.67
SHKBP1-219ENST00000599575 AMNQ9BXJ7 453 aa19.21■□□□□ 0.67
SHKBP1-219ENST00000599575 PORCNQ9H237 461 aa19.21■□□□□ 0.67
SHKBP1-219ENST00000599575 RAVER2Q9HCJ3 691 aaKnown RBP19.21■□□□□ 0.67
SHKBP1-219ENST00000599575 CCPG1Q9ULG6 757 aa19.21■□□□□ 0.67
SHKBP1-219ENST00000599575 NAP1L2Q9ULW6 460 aaPredicted RBP19.21■□□□□ 0.67
SHKBP1-219ENST00000599575 HPS5Q9UPZ3 1129 aa19.21■□□□□ 0.67
SHKBP1-219ENST00000599575 PNMA6FA0A0J9YX94 578 aa19.2■□□□□ 0.66
SHKBP1-219ENST00000599575 FCER1AP12319 257 aa19.2■□□□□ 0.66
SHKBP1-219ENST00000599575 MCM2P49736 904 aa19.2■□□□□ 0.66
SHKBP1-219ENST00000599575 GPR142Q7Z601 462 aa19.2■□□□□ 0.66
SHKBP1-219ENST00000599575 NCAPG2Q86XI2 1143 aa19.2■□□□□ 0.66
SHKBP1-219ENST00000599575 SLC5A4Q9NY91 659 aa19.2■□□□□ 0.66
SHKBP1-219ENST00000599575 SEC63Q9UGP8 760 aaKnown RBP19.2■□□□□ 0.66
SHKBP1-219ENST00000599575 SRRDQ9UH36 339 aa19.2■□□□□ 0.66
SHKBP1-219ENST00000599575 CYTH3O43739 400 aa19.19■□□□□ 0.66
SHKBP1-219ENST00000599575 XRCC5P13010 732 aaKnown RBP19.19■□□□□ 0.66
SHKBP1-219ENST00000599575 RXRAP19793 462 aa19.19■□□□□ 0.66
SHKBP1-219ENST00000599575 PTPREP23469 700 aa19.19■□□□□ 0.66
SHKBP1-219ENST00000599575 IRF5Q13568 498 aa19.19■□□□□ 0.66
SHKBP1-219ENST00000599575 KCTD2Q14681 263 aa19.19■□□□□ 0.66
SHKBP1-219ENST00000599575 QRICH1Q2TAL8 776 aa19.19■□□□□ 0.66
SHKBP1-219ENST00000599575 OTOP1Q7RTM1 612 aa19.19■□□□□ 0.66
SHKBP1-219ENST00000599575 FBXO11Q86XK2 927 aa19.19■□□□□ 0.66
SHKBP1-219ENST00000599575 SRBD1Q8N5C6 995 aaKnown RBP19.19■□□□□ 0.66
SHKBP1-219ENST00000599575 SAMD3Q8N6K7 520 aa19.19■□□□□ 0.66
SHKBP1-219ENST00000599575 RGS22Q8NE09 1264 aa19.19■□□□□ 0.66
SHKBP1-219ENST00000599575 ZSCAN31Q96LW9 406 aaPredicted RBP19.19■□□□□ 0.66
SHKBP1-219ENST00000599575 NUDT12Q9BQG2 462 aa19.19■□□□□ 0.66
SHKBP1-219ENST00000599575 ACAD9Q9H845 621 aa19.19■□□□□ 0.66
SHKBP1-219ENST00000599575 FAM217BQ9NTX9 383 aaPredicted RBP19.19■□□□□ 0.66
SHKBP1-219ENST00000599575 LIMCH1Q9UPQ0 1083 aa19.19■□□□□ 0.66
SHKBP1-219ENST00000599575 ABCB11O95342 1321 aa19.19■□□□□ 0.66
SHKBP1-219ENST00000599575 hCG_1984214I3L0E3 225 aa19.18■□□□□ 0.66
SHKBP1-219ENST00000599575 PFKFB2O60825 505 aa19.18■□□□□ 0.66
SHKBP1-219ENST00000599575 CDKL5O76039 1030 aa19.18■□□□□ 0.66
SHKBP1-219ENST00000599575 HOXC6P09630 235 aa19.18■□□□□ 0.66
SHKBP1-219ENST00000599575 IFNAR1P17181 557 aa19.18■□□□□ 0.66
SHKBP1-219ENST00000599575 GRB14Q14449 540 aa19.18■□□□□ 0.66
SHKBP1-219ENST00000599575 CCDC174Q6PII3 467 aa19.18■□□□□ 0.66
SHKBP1-219ENST00000599575 CCDC144CPQ8IYA2 1237 aa19.18■□□□□ 0.66
SHKBP1-219ENST00000599575 TRMT44Q8IYL2 757 aaKnown RBP19.18■□□□□ 0.66
SHKBP1-219ENST00000599575 ZNF713Q8N859 430 aaPredicted RBP19.18■□□□□ 0.66
SHKBP1-219ENST00000599575 AGBL1Q96MI9 1066 aa19.18■□□□□ 0.66
SHKBP1-219ENST00000599575 SLKQ9H2G2 1235 aaPredicted RBP19.18■□□□□ 0.66
SHKBP1-219ENST00000599575 CPVLQ9H3G5 476 aa19.18■□□□□ 0.66
SHKBP1-219ENST00000599575 VAT1LQ9HCJ6 419 aa19.18■□□□□ 0.66
SHKBP1-219ENST00000599575 MRPL11Q9Y3B7 192 aaKnown RBP19.18■□□□□ 0.66
SHKBP1-219ENST00000599575 TRIM17Q9Y577 477 aa19.18■□□□□ 0.66
SHKBP1-219ENST00000599575 CPLX1O14810 134 aa19.17■□□□□ 0.66
SHKBP1-219ENST00000599575 PEX10O60683 326 aa19.17■□□□□ 0.66
SHKBP1-219ENST00000599575 PLEKHA8P1O95397 391 aa19.17■□□□□ 0.66
SHKBP1-219ENST00000599575 CTGFP29279 349 aa19.17■□□□□ 0.66
SHKBP1-219ENST00000599575 ADD1P35611 737 aaKnown RBP19.17■□□□□ 0.66
SHKBP1-219ENST00000599575 FUT2Q10981 343 aa19.17■□□□□ 0.66
SHKBP1-219ENST00000599575 MORN1Q5T089 497 aa19.17■□□□□ 0.66
SHKBP1-219ENST00000599575 WDR78Q5VTH9 848 aa19.17■□□□□ 0.66
SHKBP1-219ENST00000599575 NBPF11Q86T75 865 aa19.17■□□□□ 0.66
SHKBP1-219ENST00000599575 MCF2L2Q86YR7 1114 aa19.17■□□□□ 0.66
SHKBP1-219ENST00000599575 TRERF1Q96PN7 1200 aa19.17■□□□□ 0.66
SHKBP1-219ENST00000599575 PIGSQ96S52 555 aa19.17■□□□□ 0.66
SHKBP1-219ENST00000599575 ARHGAP39Q9C0H5 1083 aa19.17■□□□□ 0.66
SHKBP1-219ENST00000599575 SH2B1Q9NRF2 756 aaPredicted RBP19.17■□□□□ 0.66
SHKBP1-219ENST00000599575 RNF146Q9NTX7 359 aa19.17■□□□□ 0.66
SHKBP1-219ENST00000599575 MAP3K20Q9NYL2 800 aaKnown RBP19.17■□□□□ 0.66
SHKBP1-219ENST00000599575 GJD2Q9UKL4 321 aa19.17■□□□□ 0.66
SHKBP1-219ENST00000599575 TPCN1Q9ULQ1 816 aa19.17■□□□□ 0.66
SHKBP1-219ENST00000599575 DIS3Q9Y2L1 958 aaKnown RBP19.17■□□□□ 0.66
SHKBP1-219ENST00000599575 RIPK3Q9Y572 518 aa19.17■□□□□ 0.66
SHKBP1-219ENST00000599575 PFASO15067 1338 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms