RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 CHD1LQ86WJ1 897 aa22.15■■□□□ 1.14
PNKP-213ENST00000599543 STAG1Q8WVM7 1258 aa22.15■■□□□ 1.14
PNKP-213ENST00000599543 ACAD9Q9H845 621 aa22.15■■□□□ 1.14
PNKP-213ENST00000599543 TOMM22Q9NS69 142 aa22.15■■□□□ 1.14
PNKP-213ENST00000599543 FAM184BQ9ULE4 1060 aa22.15■■□□□ 1.14
PNKP-213ENST00000599543 ORC4O43929 436 aa22.14■■□□□ 1.13
PNKP-213ENST00000599543 SNAI1O95863 264 aaPredicted RBP22.14■■□□□ 1.13
PNKP-213ENST00000599543 ALX1Q15699 326 aa22.14■■□□□ 1.13
PNKP-213ENST00000599543 KCTD1Q719H9 257 aa22.14■■□□□ 1.13
PNKP-213ENST00000599543 SYNRGQ9UMZ2 1314 aa22.13■■□□□ 1.13
PNKP-213ENST00000599543 A0A1W2PQ45 241 aaPredicted RBP22.13■■□□□ 1.13
PNKP-213ENST00000599543 A0A1W2PQY0 241 aa22.13■■□□□ 1.13
PNKP-213ENST00000599543 PLA2G6O60733 806 aa22.13■■□□□ 1.13
PNKP-213ENST00000599543 DEFB123Q8N688 67 aa22.13■■□□□ 1.13
PNKP-213ENST00000599543 RILPL2Q969X0 211 aa22.13■■□□□ 1.13
PNKP-213ENST00000599543 PDLIM7Q9NR12 457 aa22.13■■□□□ 1.13
PNKP-213ENST00000599543 RNF146Q9NTX7 359 aa22.13■■□□□ 1.13
PNKP-213ENST00000599543 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.13■■□□□ 1.13
PNKP-213ENST00000599543 MTMR7Q9Y216 660 aa22.13■■□□□ 1.13
PNKP-213ENST00000599543 ZMYM6O95789 1325 aa22.12■■□□□ 1.13
PNKP-213ENST00000599543 ADAMTS4O75173 837 aa22.12■■□□□ 1.13
PNKP-213ENST00000599543 FGAP02671 866 aa22.12■■□□□ 1.13
PNKP-213ENST00000599543 NEFLP07196 543 aa22.12■■□□□ 1.13
PNKP-213ENST00000599543 HSPD1P10809 573 aaKnown RBP22.12■■□□□ 1.13
PNKP-213ENST00000599543 NMIQ13287 307 aaPredicted RBP22.12■■□□□ 1.13
PNKP-213ENST00000599543 ACVR2BQ13705 512 aa22.12■■□□□ 1.13
PNKP-213ENST00000599543 CCDC96Q2M329 555 aa22.12■■□□□ 1.13
PNKP-213ENST00000599543 RRP12Q5JTH9 1297 aaKnown RBP22.12■■□□□ 1.13
PNKP-213ENST00000599543 RCSD1Q6JBY9 416 aa22.12■■□□□ 1.13
PNKP-213ENST00000599543 AGBL1Q96MI9 1066 aa22.12■■□□□ 1.13
PNKP-213ENST00000599543 ABHD16BQ9H3Z7 469 aa22.12■■□□□ 1.13
PNKP-213ENST00000599543 TACC3Q9Y6A5 838 aa22.12■■□□□ 1.13
PNKP-213ENST00000599543 ZNF536O15090 1300 aa22.11■■□□□ 1.13
PNKP-213ENST00000599543 CCDC171Q6TFL3 1326 aa22.11■■□□□ 1.13
PNKP-213ENST00000599543 FGRP09769 529 aa22.11■■□□□ 1.13
PNKP-213ENST00000599543 TKFCQ3LXA3 575 aa22.11■■□□□ 1.13
PNKP-213ENST00000599543 CCDC174Q6PII3 467 aa22.11■■□□□ 1.13
PNKP-213ENST00000599543 ARMCX2Q7L311 632 aa22.11■■□□□ 1.13
PNKP-213ENST00000599543 RASGRP2Q7LDG7 609 aa22.11■■□□□ 1.13
PNKP-213ENST00000599543 ZNF589Q86UQ0 364 aaPredicted RBP22.11■■□□□ 1.13
PNKP-213ENST00000599543 FGD4Q96M96 766 aa22.11■■□□□ 1.13
PNKP-213ENST00000599543 TSEN34Q9BSV6 310 aaKnown RBP22.11■■□□□ 1.13
PNKP-213ENST00000599543 POTEB2H3BUK9 544 aa22.1■■□□□ 1.13
PNKP-213ENST00000599543 DUSP11O75319 330 aaKnown RBP22.1■■□□□ 1.13
PNKP-213ENST00000599543 ALAS1P13196 640 aa22.1■■□□□ 1.13
PNKP-213ENST00000599543 TLE2Q04725 743 aa22.1■■□□□ 1.13
PNKP-213ENST00000599543 Q7L0L9 218 aa22.1■■□□□ 1.13
PNKP-213ENST00000599543 CCDC144CPQ8IYA2 1237 aa22.1■■□□□ 1.13
PNKP-213ENST00000599543 NUP133Q8WUM0 1156 aa22.1■■□□□ 1.13
PNKP-213ENST00000599543 DCAF4Q8WV16 495 aa22.1■■□□□ 1.13
PNKP-213ENST00000599543 TRERF1Q96PN7 1200 aa22.1■■□□□ 1.13
PNKP-213ENST00000599543 A1CFQ9NQ94 594 aaKnown RBP22.1■■□□□ 1.13
PNKP-213ENST00000599543 PRR12Q9ULL5 1215 aa22.1■■□□□ 1.13
PNKP-213ENST00000599543 LAMA4Q16363 1823 aa22.1■■□□□ 1.13
PNKP-213ENST00000599543 MOXD2PA6NHM9 499 aa22.09■■□□□ 1.13
PNKP-213ENST00000599543 PQBP1O60828 265 aaKnown RBP22.09■■□□□ 1.13
PNKP-213ENST00000599543 CLTBP09497 229 aa22.09■■□□□ 1.13
PNKP-213ENST00000599543 PDE4AP27815 886 aa22.09■■□□□ 1.13
PNKP-213ENST00000599543 NOVP48745 357 aa22.09■■□□□ 1.13
PNKP-213ENST00000599543 ACLYP53396 1101 aa22.09■■□□□ 1.13
PNKP-213ENST00000599543 MFAP1P55081 439 aaKnown RBP22.09■■□□□ 1.13
PNKP-213ENST00000599543 CNTN2Q02246 1040 aa22.09■■□□□ 1.13
PNKP-213ENST00000599543 CCDC144BQ3MJ40 725 aa22.09■■□□□ 1.13
PNKP-213ENST00000599543 SH3RF1Q7Z6J0 888 aa22.09■■□□□ 1.13
PNKP-213ENST00000599543 BADQ92934 168 aa22.09■■□□□ 1.13
PNKP-213ENST00000599543 SPC25Q9HBM1 224 aa22.09■■□□□ 1.13
PNKP-213ENST00000599543 STARD7Q9NQZ5 370 aa22.09■■□□□ 1.13
PNKP-213ENST00000599543 LRRC37A2A6NM11 1700 aa22.09■■□□□ 1.13
PNKP-213ENST00000599543 TRIM43BA6NCK2 446 aa22.08■■□□□ 1.13
PNKP-213ENST00000599543 C6orf222P0C671 652 aaPredicted RBP22.08■■□□□ 1.13
PNKP-213ENST00000599543 TOP1P11387 765 aaKnown RBP22.08■■□□□ 1.13
PNKP-213ENST00000599543 SNAP25P60880 206 aa22.08■■□□□ 1.13
PNKP-213ENST00000599543 HAND2P61296 217 aa22.08■■□□□ 1.13
PNKP-213ENST00000599543 KCNA10Q16322 511 aa22.08■■□□□ 1.13
PNKP-213ENST00000599543 SKAP1Q86WV1 359 aa22.08■■□□□ 1.13
PNKP-213ENST00000599543 PLEKHM2Q8IWE5 1019 aa22.08■■□□□ 1.13
PNKP-213ENST00000599543 FAM133AQ8N9E0 248 aa22.08■■□□□ 1.13
PNKP-213ENST00000599543 KLHDC9Q8NEP7 349 aa22.08■■□□□ 1.13
PNKP-213ENST00000599543 TRIM43Q96BQ3 446 aaPredicted RBP22.08■■□□□ 1.13
PNKP-213ENST00000599543 CCPG1Q9ULG6 757 aa22.08■■□□□ 1.13
PNKP-213ENST00000599543 PCSK9Q8NBP7 692 aaKnown RBP22.07■■□□□ 1.12
PNKP-213ENST00000599543 TCP11L1Q9NUJ3 509 aa22.07■■□□□ 1.12
PNKP-213ENST00000599543 LCTP09848 1927 aa22.07■■□□□ 1.12
PNKP-213ENST00000599543 CDH23Q9H251 3354 aa22.07■■□□□ 1.12
PNKP-213ENST00000599543 MYADML2A6NDP7 307 aa22.06■■□□□ 1.12
PNKP-213ENST00000599543 ASB14A6NK59 587 aa22.06■■□□□ 1.12
PNKP-213ENST00000599543 ADCY6O43306 1168 aa22.06■■□□□ 1.12
PNKP-213ENST00000599543 ICAM1P05362 532 aa22.06■■□□□ 1.12
PNKP-213ENST00000599543 PCP11498 1178 aaKnown RBP22.06■■□□□ 1.12
PNKP-213ENST00000599543 SDSP20132 328 aa22.06■■□□□ 1.12
PNKP-213ENST00000599543 CST5P28325 142 aaPredicted RBP22.06■■□□□ 1.12
PNKP-213ENST00000599543 CCSAPQ6IQ19 270 aaPredicted RBP22.06■■□□□ 1.12
PNKP-213ENST00000599543 MFSD6Q6ZSS7 791 aa22.06■■□□□ 1.12
PNKP-213ENST00000599543 GLT1D1Q96MS3 346 aa22.06■■□□□ 1.12
PNKP-213ENST00000599543 TMEM47Q9BQJ4 181 aa22.06■■□□□ 1.12
PNKP-213ENST00000599543 MUM1L1Q5H9M0 696 aa22.05■■□□□ 1.12
PNKP-213ENST00000599543 AKNAD1Q5T1N1 836 aa22.05■■□□□ 1.12
PNKP-213ENST00000599543 KATNBL1Q9H079 304 aa22.05■■□□□ 1.12
PNKP-213ENST00000599543 OSBPL3Q9H4L5 887 aa22.05■■□□□ 1.12
PNKP-213ENST00000599543 RNF41Q9H4P4 317 aaPredicted RBP22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms