RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 HSPA8P11142 646 aaKnown RBP25.67■■□□□ 1.7
CHMP2A-204ENST00000597848 SMARCA1P28370 1054 aa25.67■■□□□ 1.7
CHMP2A-204ENST00000597848 CDC37Q16543 378 aaPredicted RBP25.67■■□□□ 1.7
CHMP2A-204ENST00000597848 SLC35G1Q2M3R5 365 aa25.67■■□□□ 1.7
CHMP2A-204ENST00000597848 SNRNP48Q6IEG0 339 aaKnown RBP25.67■■□□□ 1.7
CHMP2A-204ENST00000597848 HOMER1Q86YM7 354 aa25.67■■□□□ 1.7
CHMP2A-204ENST00000597848 SPZ1Q9BXG8 430 aa25.67■■□□□ 1.7
CHMP2A-204ENST00000597848 TEX13BQ9BXU2 312 aa25.67■■□□□ 1.7
CHMP2A-204ENST00000597848 CWC22Q9HCG8 908 aaKnown RBP25.67■■□□□ 1.7
CHMP2A-204ENST00000597848 ZNF214Q9UL59 606 aaPredicted RBP25.67■■□□□ 1.7
CHMP2A-204ENST00000597848 CYTH3O43739 400 aa25.66■■□□□ 1.7
CHMP2A-204ENST00000597848 LBX1P52954 281 aa25.66■■□□□ 1.7
CHMP2A-204ENST00000597848 OAZ1P54368 228 aa25.66■■□□□ 1.7
CHMP2A-204ENST00000597848 WDR78Q5VTH9 848 aa25.66■■□□□ 1.7
CHMP2A-204ENST00000597848 RRP36Q96EU6 259 aaKnown RBP25.66■■□□□ 1.7
CHMP2A-204ENST00000597848 AGBL1Q96MI9 1066 aa25.66■■□□□ 1.7
CHMP2A-204ENST00000597848 PIGSQ96S52 555 aa25.66■■□□□ 1.7
CHMP2A-204ENST00000597848 MOV10L1Q9BXT6 1211 aaKnown RBP25.66■■□□□ 1.7
CHMP2A-204ENST00000597848 CPLX1O14810 134 aa25.65■■□□□ 1.7
CHMP2A-204ENST00000597848 ATP2A1O14983 1001 aa25.65■■□□□ 1.7
CHMP2A-204ENST00000597848 PFKFB2O60825 505 aa25.65■■□□□ 1.7
CHMP2A-204ENST00000597848 LACTBP83111 547 aaPredicted RBP25.65■■□□□ 1.7
CHMP2A-204ENST00000597848 ME3Q16798 604 aa25.65■■□□□ 1.7
CHMP2A-204ENST00000597848 QRICH1Q2TAL8 776 aa25.65■■□□□ 1.7
CHMP2A-204ENST00000597848 NCAPG2Q86XI2 1143 aa25.65■■□□□ 1.7
CHMP2A-204ENST00000597848 CCPG1Q9ULG6 757 aa25.65■■□□□ 1.7
CHMP2A-204ENST00000597848 ZBTB5O15062 677 aa25.64■■□□□ 1.7
CHMP2A-204ENST00000597848 ICAM1P05362 532 aa25.64■■□□□ 1.7
CHMP2A-204ENST00000597848 RIOX2Q8IUF8 465 aa25.64■■□□□ 1.7
CHMP2A-204ENST00000597848 NECAB1Q8N987 351 aa25.64■■□□□ 1.7
CHMP2A-204ENST00000597848 CD99L2Q8TCZ2 262 aa25.64■■□□□ 1.7
CHMP2A-204ENST00000597848 ERO1AQ96HE7 468 aa25.64■■□□□ 1.7
CHMP2A-204ENST00000597848 ZSCAN31Q96LW9 406 aaPredicted RBP25.64■■□□□ 1.7
CHMP2A-204ENST00000597848 PORCNQ9H237 461 aa25.64■■□□□ 1.7
CHMP2A-204ENST00000597848 EFCC1Q9HA90 598 aa25.64■■□□□ 1.7
CHMP2A-204ENST00000597848 SEC63Q9UGP8 760 aaKnown RBP25.64■■□□□ 1.7
CHMP2A-204ENST00000597848 PARP14Q460N5 1801 aa25.64■■□□□ 1.7
CHMP2A-204ENST00000597848 NID2Q14112 1375 aa25.64■■□□□ 1.69
CHMP2A-204ENST00000597848 ZNF536O15090 1300 aa25.63■■□□□ 1.69
CHMP2A-204ENST00000597848 LARGE1O95461 756 aa25.63■■□□□ 1.69
CHMP2A-204ENST00000597848 FMNL1O95466 1100 aaPredicted RBP25.63■■□□□ 1.69
CHMP2A-204ENST00000597848 SLC25A27O95847 323 aa25.63■■□□□ 1.69
CHMP2A-204ENST00000597848 ALAS1P13196 640 aa25.63■■□□□ 1.69
CHMP2A-204ENST00000597848 ERCC3P19447 782 aa25.63■■□□□ 1.69
CHMP2A-204ENST00000597848 PSMC4P43686 418 aa25.63■■□□□ 1.69
CHMP2A-204ENST00000597848 SCRN1Q12765 414 aa25.63■■□□□ 1.69
CHMP2A-204ENST00000597848 CPLX2Q6PUV4 134 aaKnown RBP25.63■■□□□ 1.69
CHMP2A-204ENST00000597848 MTMR8Q96EF0 704 aa25.63■■□□□ 1.69
CHMP2A-204ENST00000597848 PNMA2Q9UL42 364 aa25.63■■□□□ 1.69
CHMP2A-204ENST00000597848 RIPK3Q9Y572 518 aa25.63■■□□□ 1.69
CHMP2A-204ENST00000597848 PNMA6FA0A0J9YX94 578 aa25.62■■□□□ 1.69
CHMP2A-204ENST00000597848 hCG_1642624A0A1W2PR95 340 aa25.62■■□□□ 1.69
CHMP2A-204ENST00000597848 MAPK4P31152 587 aa25.62■■□□□ 1.69
CHMP2A-204ENST00000597848 COPB2P35606 906 aa25.62■■□□□ 1.69
CHMP2A-204ENST00000597848 FCGRTP55899 365 aa25.62■■□□□ 1.69
CHMP2A-204ENST00000597848 USH1GQ495M9 461 aa25.62■■□□□ 1.69
CHMP2A-204ENST00000597848 FBXO11Q86XK2 927 aa25.62■■□□□ 1.69
CHMP2A-204ENST00000597848 SHCBP1Q8NEM2 672 aa25.62■■□□□ 1.69
CHMP2A-204ENST00000597848 ARHGAP39Q9C0H5 1083 aa25.62■■□□□ 1.69
CHMP2A-204ENST00000597848 MROH8Q9H579 483 aa25.62■■□□□ 1.69
CHMP2A-204ENST00000597848 HOMER2Q9NSB8 354 aa25.62■■□□□ 1.69
CHMP2A-204ENST00000597848 V9GY48 417 aaPredicted RBP25.62■■□□□ 1.69
CHMP2A-204ENST00000597848 TNPO2O14787 897 aaKnown RBP25.61■■□□□ 1.69
CHMP2A-204ENST00000597848 MCM2P49736 904 aa25.61■■□□□ 1.69
CHMP2A-204ENST00000597848 FUT2Q10981 343 aa25.61■■□□□ 1.69
CHMP2A-204ENST00000597848 ARHGEF6Q15052 776 aa25.61■■□□□ 1.69
CHMP2A-204ENST00000597848 AMNQ9BXJ7 453 aa25.61■■□□□ 1.69
CHMP2A-204ENST00000597848 CNTNAP5Q8WYK1 1306 aa25.61■■□□□ 1.69
CHMP2A-204ENST00000597848 PPFIA3O75145 1194 aa25.6■■□□□ 1.69
CHMP2A-204ENST00000597848 CD2BP2O95400 341 aaKnown RBP25.6■■□□□ 1.69
CHMP2A-204ENST00000597848 TAL1P17542 331 aaPredicted RBP25.6■■□□□ 1.69
CHMP2A-204ENST00000597848 AKAP17AQ02040 695 aaKnown RBP25.6■■□□□ 1.69
CHMP2A-204ENST00000597848 TKFCQ3LXA3 575 aa25.6■■□□□ 1.69
CHMP2A-204ENST00000597848 PHKBQ93100 1093 aa25.6■■□□□ 1.69
CHMP2A-204ENST00000597848 GTF3C6Q969F1 213 aa25.6■■□□□ 1.69
CHMP2A-204ENST00000597848 TRERF1Q96PN7 1200 aa25.6■■□□□ 1.69
CHMP2A-204ENST00000597848 SH2B1Q9NRF2 756 aaPredicted RBP25.6■■□□□ 1.69
CHMP2A-204ENST00000597848 IVNS1ABPQ9Y6Y0 642 aa25.6■■□□□ 1.69
CHMP2A-204ENST00000597848 A0A0G2JMZ2 1700 aa25.6■■□□□ 1.69
CHMP2A-204ENST00000597848 IFNAR1P17181 557 aa25.59■■□□□ 1.69
CHMP2A-204ENST00000597848 CTGFP29279 349 aa25.59■■□□□ 1.69
CHMP2A-204ENST00000597848 TRAF1Q13077 416 aa25.59■■□□□ 1.69
CHMP2A-204ENST00000597848 NTRK3Q16288 839 aa25.59■■□□□ 1.69
CHMP2A-204ENST00000597848 PLEKHH3Q7Z736 793 aa25.59■■□□□ 1.69
CHMP2A-204ENST00000597848 COA7Q96BR5 231 aa25.59■■□□□ 1.69
CHMP2A-204ENST00000597848 TRIM47Q96LD4 638 aa25.59■■□□□ 1.69
CHMP2A-204ENST00000597848 SLC26A6Q9BXS9 759 aa25.59■■□□□ 1.69
CHMP2A-204ENST00000597848 RNF146Q9NTX7 359 aa25.59■■□□□ 1.69
CHMP2A-204ENST00000597848 COL11A1P12107 1806 aaPredicted RBP25.58■■□□□ 1.69
CHMP2A-204ENST00000597848 CDKL5O76039 1030 aa25.58■■□□□ 1.69
CHMP2A-204ENST00000597848 SSRP1Q08945 709 aaKnown RBP25.58■■□□□ 1.69
CHMP2A-204ENST00000597848 GPR142Q7Z601 462 aa25.58■■□□□ 1.69
CHMP2A-204ENST00000597848 TRIM22Q8IYM9 498 aa25.58■■□□□ 1.69
CHMP2A-204ENST00000597848 CHST13Q8NET6 341 aa25.58■■□□□ 1.69
CHMP2A-204ENST00000597848 FBXO40Q9UH90 709 aa25.58■■□□□ 1.69
CHMP2A-204ENST00000597848 PCDHA1Q9Y5I3 950 aa25.58■■□□□ 1.69
CHMP2A-204ENST00000597848 BAZ2BQ9UIF8 2168 aaKnown RBP25.58■■□□□ 1.68
CHMP2A-204ENST00000597848 PRPF3O43395 683 aaKnown RBP25.57■■□□□ 1.68
CHMP2A-204ENST00000597848 PPP1R11O60927 126 aaPredicted RBP25.57■■□□□ 1.68
CHMP2A-204ENST00000597848 CCDC83Q8IWF9 413 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms