RNA–Protein interactions for RNA: ENST00000597400.5

ZNF548-207, Transcript of zinc finger protein 548, humanhuman

TSL 3 BASIC

Gene ZNF548, Length 589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-207ENST00000597400 RAD21O60216 631 aa13.16□□□□□ -0.3
ZNF548-207ENST00000597400 CCL23P55773 120 aa13.16□□□□□ -0.3
ZNF548-207ENST00000597400 KRT40Q6A162 431 aa13.16□□□□□ -0.3
ZNF548-207ENST00000597400 CEP85Q6P2H3 762 aa13.16□□□□□ -0.3
ZNF548-207ENST00000597400 CCDC174Q6PII3 467 aa13.16□□□□□ -0.3
ZNF548-207ENST00000597400 ARMCX2Q7L311 632 aa13.16□□□□□ -0.3
ZNF548-207ENST00000597400 ZNF467Q7Z7K2 595 aaPredicted RBP13.16□□□□□ -0.3
ZNF548-207ENST00000597400 SLC43A3Q8NBI5 491 aa13.16□□□□□ -0.3
ZNF548-207ENST00000597400 PCSK9Q8NBP7 692 aaKnown RBP13.16□□□□□ -0.3
ZNF548-207ENST00000597400 DNAJC2Q99543 621 aaKnown RBP13.16□□□□□ -0.3
ZNF548-207ENST00000597400 SLF1Q9BQI6 1058 aa13.16□□□□□ -0.3
ZNF548-207ENST00000597400 LRFN3Q9BTN0 628 aa13.16□□□□□ -0.3
ZNF548-207ENST00000597400 DDX49Q9Y6V7 483 aaKnown RBP13.16□□□□□ -0.3
ZNF548-207ENST00000597400 EPOPA6NHQ4 379 aa13.15□□□□□ -0.3
ZNF548-207ENST00000597400 USP17L12C9JPN9 530 aa13.15□□□□□ -0.3
ZNF548-207ENST00000597400 USP17L21D6R901 530 aa13.15□□□□□ -0.3
ZNF548-207ENST00000597400 COPB2P35606 906 aa13.15□□□□□ -0.3
ZNF548-207ENST00000597400 ADD2P35612 726 aa13.15□□□□□ -0.3
ZNF548-207ENST00000597400 TTF1Q15361 905 aaPredicted RBP13.15□□□□□ -0.3
ZNF548-207ENST00000597400 GNASQ5JWF2 1037 aa13.15□□□□□ -0.3
ZNF548-207ENST00000597400 PPP2R2DQ66LE6 453 aa13.15□□□□□ -0.3
ZNF548-207ENST00000597400 CXCL17Q6UXB2 119 aa13.15□□□□□ -0.3
ZNF548-207ENST00000597400 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.15□□□□□ -0.3
ZNF548-207ENST00000597400 CCDC144CPQ8IYA2 1237 aa13.15□□□□□ -0.3
ZNF548-207ENST00000597400 IL27Q8NEV9 243 aa13.15□□□□□ -0.3
ZNF548-207ENST00000597400 VTI1AQ96AJ9 217 aa13.15□□□□□ -0.3
ZNF548-207ENST00000597400 DDX11Q96FC9 970 aa13.15□□□□□ -0.3
ZNF548-207ENST00000597400 CCDC17Q96LX7 622 aa13.15□□□□□ -0.3
ZNF548-207ENST00000597400 NOC4LQ9BVI4 516 aaKnown RBP13.15□□□□□ -0.3
ZNF548-207ENST00000597400 C1QTNF1Q9BXJ1 281 aa13.15□□□□□ -0.3
ZNF548-207ENST00000597400 ABHD16BQ9H3Z7 469 aa13.15□□□□□ -0.3
ZNF548-207ENST00000597400 HIPK3Q9H422 1215 aa13.15□□□□□ -0.3
ZNF548-207ENST00000597400 KANSL2Q9H9L4 492 aa13.15□□□□□ -0.3
ZNF548-207ENST00000597400 GOPCQ9HD26 462 aa13.15□□□□□ -0.3
ZNF548-207ENST00000597400 C11orf16Q9NQ32 467 aa13.15□□□□□ -0.3
ZNF548-207ENST00000597400 PIEZO1Q92508 2521 aa13.14□□□□□ -0.31
ZNF548-207ENST00000597400 C5orf42Q9H799 3197 aa13.14□□□□□ -0.31
ZNF548-207ENST00000597400 B4GALT4O60513 344 aa13.14□□□□□ -0.31
ZNF548-207ENST00000597400 ARHGEF15O94989 841 aa13.14□□□□□ -0.31
ZNF548-207ENST00000597400 FGBP02675 491 aa13.14□□□□□ -0.31
ZNF548-207ENST00000597400 SLC4A3P48751 1232 aa13.14□□□□□ -0.31
ZNF548-207ENST00000597400 NKX3-2P78367 333 aa13.14□□□□□ -0.31
ZNF548-207ENST00000597400 TMEM63BQ5T3F8 832 aa13.14□□□□□ -0.31
ZNF548-207ENST00000597400 ZKSCAN2Q63HK3 967 aa13.14□□□□□ -0.31
ZNF548-207ENST00000597400 CPXCR1Q8N123 301 aa13.14□□□□□ -0.31
ZNF548-207ENST00000597400 SCLYQ96I15 445 aa13.14□□□□□ -0.31
ZNF548-207ENST00000597400 TRPV6Q9H1D0 765 aa13.14□□□□□ -0.31
ZNF548-207ENST00000597400 RAVER2Q9HCJ3 691 aaKnown RBP13.14□□□□□ -0.31
ZNF548-207ENST00000597400 ATP8A2Q9NTI2 1148 aa13.14□□□□□ -0.31
ZNF548-207ENST00000597400 TRIOO75962 3097 aa13.14□□□□□ -0.31
ZNF548-207ENST00000597400 TRIP12Q14669 1992 aaPredicted RBP13.14□□□□□ -0.31
ZNF548-207ENST00000597400 SCN10AQ9Y5Y9 1956 aa13.14□□□□□ -0.31
ZNF548-207ENST00000597400 ATP2A1O14983 1001 aa13.13□□□□□ -0.31
ZNF548-207ENST00000597400 ERC2O15083 957 aa13.13□□□□□ -0.31
ZNF548-207ENST00000597400 TLR3O15455 904 aaKnown RBP13.13□□□□□ -0.31
ZNF548-207ENST00000597400 NDUFB10O96000 172 aa13.13□□□□□ -0.31
ZNF548-207ENST00000597400 CNTN2Q02246 1040 aa13.13□□□□□ -0.31
ZNF548-207ENST00000597400 CTR9Q6PD62 1173 aa13.13□□□□□ -0.31
ZNF548-207ENST00000597400 SPRED2Q7Z698 418 aa13.13□□□□□ -0.31
ZNF548-207ENST00000597400 ITPRIPQ8IWB1 547 aa13.13□□□□□ -0.31
ZNF548-207ENST00000597400 RHPN1Q8TCX5 695 aa13.13□□□□□ -0.31
ZNF548-207ENST00000597400 MTCH2Q9Y6C9 303 aa13.13□□□□□ -0.31
ZNF548-207ENST00000597400 SIP14410 1827 aa13.12□□□□□ -0.31
ZNF548-207ENST00000597400 RBAK-RBAKDNI3L0D1 243 aa13.12□□□□□ -0.31
ZNF548-207ENST00000597400 CA3P07451 260 aa13.12□□□□□ -0.31
ZNF548-207ENST00000597400 RASA1P20936 1047 aa13.12□□□□□ -0.31
ZNF548-207ENST00000597400 PSMC6P62333 389 aa13.12□□□□□ -0.31
ZNF548-207ENST00000597400 TTLL4Q14679 1199 aa13.12□□□□□ -0.31
ZNF548-207ENST00000597400 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.12□□□□□ -0.31
ZNF548-207ENST00000597400 AGBL1Q96MI9 1066 aa13.12□□□□□ -0.31
ZNF548-207ENST00000597400 CERS4Q9HA82 394 aa13.12□□□□□ -0.31
ZNF548-207ENST00000597400 SPC25Q9HBM1 224 aa13.12□□□□□ -0.31
ZNF548-207ENST00000597400 SLC38A10Q9HBR0 1119 aa13.12□□□□□ -0.31
ZNF548-207ENST00000597400 GNEQ9Y223 722 aaKnown RBP13.12□□□□□ -0.31
ZNF548-207ENST00000597400 PCDHA11Q9Y5I1 949 aa13.12□□□□□ -0.31
ZNF548-207ENST00000597400 FAM86C2PA6NEL3 165 aa13.11□□□□□ -0.31
ZNF548-207ENST00000597400 F5H6K3 240 aa13.11□□□□□ -0.31
ZNF548-207ENST00000597400 POU3F3P20264 500 aaPredicted RBP13.11□□□□□ -0.31
ZNF548-207ENST00000597400 KLRC3Q07444 240 aa13.11□□□□□ -0.31
ZNF548-207ENST00000597400 ITGA7Q13683 1181 aa13.11□□□□□ -0.31
ZNF548-207ENST00000597400 TLK2Q86UE8 772 aa13.11□□□□□ -0.31
ZNF548-207ENST00000597400 ERC1Q8IUD2 1116 aa13.11□□□□□ -0.31
ZNF548-207ENST00000597400 STK11IPQ8N1F8 1099 aa13.11□□□□□ -0.31
ZNF548-207ENST00000597400 ANKRD35Q8N283 1001 aa13.11□□□□□ -0.31
ZNF548-207ENST00000597400 FAM133AQ8N9E0 248 aa13.11□□□□□ -0.31
ZNF548-207ENST00000597400 PRPF38AQ8NAV1 312 aaKnown RBP13.11□□□□□ -0.31
ZNF548-207ENST00000597400 KIFC2Q96AC6 838 aa13.11□□□□□ -0.31
ZNF548-207ENST00000597400 MTIF3Q9H2K0 278 aaKnown RBP13.11□□□□□ -0.31
ZNF548-207ENST00000597400 HOMER2Q9NSB8 354 aa13.11□□□□□ -0.31
ZNF548-207ENST00000597400 PAG1Q9NWQ8 432 aa13.11□□□□□ -0.31
ZNF548-207ENST00000597400 SLC4A7Q9Y6M7 1214 aa13.11□□□□□ -0.31
ZNF548-207ENST00000597400 IGKV6D-41A0A0C4DH26 115 aa13.1□□□□□ -0.31
ZNF548-207ENST00000597400 SOWAHBA6NEL2 793 aa13.1□□□□□ -0.31
ZNF548-207ENST00000597400 ZBBXA8MT70 800 aa13.1□□□□□ -0.31
ZNF548-207ENST00000597400 TLL1O43897 1013 aa13.1□□□□□ -0.31
ZNF548-207ENST00000597400 ATP2A2P16615 1042 aaKnown RBP13.1□□□□□ -0.31
ZNF548-207ENST00000597400 SMPD1P17405 629 aa13.1□□□□□ -0.31
ZNF548-207ENST00000597400 TNFAIP2Q03169 654 aa13.1□□□□□ -0.31
ZNF548-207ENST00000597400 SKIV2LQ15477 1246 aaKnown RBP13.1□□□□□ -0.31
ZNF548-207ENST00000597400 FSCN1Q16658 493 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms