RNA–Protein interactions for RNA: ENST00000596957.1

ARHGEF1-214, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-214ENST00000596957 FAM217BQ9NTX9 383 aaPredicted RBP17.33■□□□□ 0.36
ARHGEF1-214ENST00000596957 BTBD7Q9P203 1132 aa17.33■□□□□ 0.36
ARHGEF1-214ENST00000596957 CCPG1Q9ULG6 757 aa17.33■□□□□ 0.36
ARHGEF1-214ENST00000596957 ADAMTS5Q9UNA0 930 aa17.33■□□□□ 0.36
ARHGEF1-214ENST00000596957 PTPRFP10586 1907 aa17.33■□□□□ 0.36
ARHGEF1-214ENST00000596957 ADGRA2Q96PE1 1338 aa17.32■□□□□ 0.36
ARHGEF1-214ENST00000596957 ZBTB5O15062 677 aa17.32■□□□□ 0.36
ARHGEF1-214ENST00000596957 STAT3P40763 770 aa17.32■□□□□ 0.36
ARHGEF1-214ENST00000596957 OAZ1P54368 228 aa17.32■□□□□ 0.36
ARHGEF1-214ENST00000596957 SSRP1Q08945 709 aaKnown RBP17.32■□□□□ 0.36
ARHGEF1-214ENST00000596957 KIF22Q14807 665 aa17.32■□□□□ 0.36
ARHGEF1-214ENST00000596957 TMEM132BQ14DG7 1078 aa17.32■□□□□ 0.36
ARHGEF1-214ENST00000596957 QRICH1Q2TAL8 776 aa17.32■□□□□ 0.36
ARHGEF1-214ENST00000596957 USH1GQ495M9 461 aa17.32■□□□□ 0.36
ARHGEF1-214ENST00000596957 C17orf99Q6UX52 265 aa17.32■□□□□ 0.36
ARHGEF1-214ENST00000596957 FBXO11Q86XK2 927 aa17.32■□□□□ 0.36
ARHGEF1-214ENST00000596957 PHKBQ93100 1093 aa17.32■□□□□ 0.36
ARHGEF1-214ENST00000596957 CFHR5Q9BXR6 569 aa17.32■□□□□ 0.36
ARHGEF1-214ENST00000596957 SPATC1LQ9H0A9 340 aa17.32■□□□□ 0.36
ARHGEF1-214ENST00000596957 R3HDMLQ9H3Y0 253 aa17.32■□□□□ 0.36
ARHGEF1-214ENST00000596957 RIOX1Q9H6W3 641 aa17.32■□□□□ 0.36
ARHGEF1-214ENST00000596957 TXNRD2Q9NNW7 524 aa17.32■□□□□ 0.36
ARHGEF1-214ENST00000596957 HOMER2Q9NSB8 354 aa17.32■□□□□ 0.36
ARHGEF1-214ENST00000596957 PNMA2Q9UL42 364 aa17.32■□□□□ 0.36
ARHGEF1-214ENST00000596957 V9GY48 417 aaPredicted RBP17.32■□□□□ 0.36
ARHGEF1-214ENST00000596957 CNTNAP5Q8WYK1 1306 aa17.31■□□□□ 0.36
ARHGEF1-214ENST00000596957 PNMA6FA0A0J9YX94 578 aa17.31■□□□□ 0.36
ARHGEF1-214ENST00000596957 hCG_1642624A0A1W2PR95 340 aa17.31■□□□□ 0.36
ARHGEF1-214ENST00000596957 CYTH3O43739 400 aa17.31■□□□□ 0.36
ARHGEF1-214ENST00000596957 CNMDO75829 334 aa17.31■□□□□ 0.36
ARHGEF1-214ENST00000596957 ICAM1P05362 532 aa17.31■□□□□ 0.36
ARHGEF1-214ENST00000596957 ALAS1P13196 640 aa17.31■□□□□ 0.36
ARHGEF1-214ENST00000596957 TRAF1Q13077 416 aa17.31■□□□□ 0.36
ARHGEF1-214ENST00000596957 NCAPG2Q86XI2 1143 aa17.31■□□□□ 0.36
ARHGEF1-214ENST00000596957 TMX3Q96JJ7 454 aa17.31■□□□□ 0.36
ARHGEF1-214ENST00000596957 AGBL1Q96MI9 1066 aa17.31■□□□□ 0.36
ARHGEF1-214ENST00000596957 AMNQ9BXJ7 453 aa17.31■□□□□ 0.36
ARHGEF1-214ENST00000596957 RBM27Q9P2N5 1060 aaKnown RBP17.31■□□□□ 0.36
ARHGEF1-214ENST00000596957 MORF4L1Q9UBU8 362 aa17.31■□□□□ 0.36
ARHGEF1-214ENST00000596957 GPR25O00155 361 aa17.3■□□□□ 0.36
ARHGEF1-214ENST00000596957 BCRP11274 1271 aa17.3■□□□□ 0.36
ARHGEF1-214ENST00000596957 IFNAR1P17181 557 aa17.3■□□□□ 0.36
ARHGEF1-214ENST00000596957 COPB2P35606 906 aa17.3■□□□□ 0.36
ARHGEF1-214ENST00000596957 SP3Q02447 781 aa17.3■□□□□ 0.36
ARHGEF1-214ENST00000596957 HEATR3Q7Z4Q2 680 aa17.3■□□□□ 0.36
ARHGEF1-214ENST00000596957 REPS2Q8NFH8 660 aa17.3■□□□□ 0.36
ARHGEF1-214ENST00000596957 MOV10L1Q9BXT6 1211 aaKnown RBP17.3■□□□□ 0.36
ARHGEF1-214ENST00000596957 ZNF214Q9UL59 606 aaPredicted RBP17.3■□□□□ 0.36
ARHGEF1-214ENST00000596957 K7ELQ4 463 aaPredicted RBP17.29■□□□□ 0.36
ARHGEF1-214ENST00000596957 ATP2A1O14983 1001 aa17.29■□□□□ 0.36
ARHGEF1-214ENST00000596957 SLC25A27O95847 323 aa17.29■□□□□ 0.36
ARHGEF1-214ENST00000596957 HSPA1AP0DMV8 641 aaKnown RBP17.29■□□□□ 0.36
ARHGEF1-214ENST00000596957 HSPA1BP0DMV9 641 aaKnown RBP17.29■□□□□ 0.36
ARHGEF1-214ENST00000596957 SLC35G1Q2M3R5 365 aa17.29■□□□□ 0.36
ARHGEF1-214ENST00000596957 Q3C1V9 767 aa17.29■□□□□ 0.36
ARHGEF1-214ENST00000596957 POTEEQ6S8J3 1075 aa17.29■□□□□ 0.36
ARHGEF1-214ENST00000596957 RIOX2Q8IUF8 465 aa17.29■□□□□ 0.36
ARHGEF1-214ENST00000596957 RNF26Q9BY78 433 aaPredicted RBP17.29■□□□□ 0.36
ARHGEF1-214ENST00000596957 ZNF536O15090 1300 aa17.28■□□□□ 0.36
ARHGEF1-214ENST00000596957 PTPDC1A2A3K4 754 aa17.28■□□□□ 0.36
ARHGEF1-214ENST00000596957 PRPF3O43395 683 aaKnown RBP17.28■□□□□ 0.36
ARHGEF1-214ENST00000596957 FKTNO75072 461 aa17.28■□□□□ 0.36
ARHGEF1-214ENST00000596957 FMNL1O95466 1100 aaPredicted RBP17.28■□□□□ 0.36
ARHGEF1-214ENST00000596957 HSP90AA1P07900 732 aaKnown RBP17.28■□□□□ 0.36
ARHGEF1-214ENST00000596957 ERCC3P19447 782 aa17.28■□□□□ 0.36
ARHGEF1-214ENST00000596957 MAPK4P31152 587 aa17.28■□□□□ 0.36
ARHGEF1-214ENST00000596957 FUT2Q10981 343 aa17.28■□□□□ 0.36
ARHGEF1-214ENST00000596957 TKFCQ3LXA3 575 aa17.28■□□□□ 0.36
ARHGEF1-214ENST00000596957 SNX21Q969T3 373 aa17.28■□□□□ 0.36
ARHGEF1-214ENST00000596957 MTMR8Q96EF0 704 aa17.28■□□□□ 0.36
ARHGEF1-214ENST00000596957 DDX11Q96FC9 970 aa17.28■□□□□ 0.36
ARHGEF1-214ENST00000596957 TRERF1Q96PN7 1200 aa17.28■□□□□ 0.36
ARHGEF1-214ENST00000596957 MROH8Q9H579 483 aa17.28■□□□□ 0.36
ARHGEF1-214ENST00000596957 EFCC1Q9HA90 598 aa17.28■□□□□ 0.36
ARHGEF1-214ENST00000596957 RNF146Q9NTX7 359 aa17.28■□□□□ 0.36
ARHGEF1-214ENST00000596957 PCDHA1Q9Y5I3 950 aa17.28■□□□□ 0.36
ARHGEF1-214ENST00000596957 IVNS1ABPQ9Y6Y0 642 aa17.28■□□□□ 0.36
ARHGEF1-214ENST00000596957 ABCB11O95342 1321 aa17.27■□□□□ 0.36
ARHGEF1-214ENST00000596957 TNPO2O14787 897 aaKnown RBP17.27■□□□□ 0.36
ARHGEF1-214ENST00000596957 TAL1P17542 331 aaPredicted RBP17.27■□□□□ 0.36
ARHGEF1-214ENST00000596957 FCGRTP55899 365 aa17.27■□□□□ 0.36
ARHGEF1-214ENST00000596957 LACTBP83111 547 aaPredicted RBP17.27■□□□□ 0.36
ARHGEF1-214ENST00000596957 BECN1Q14457 450 aa17.27■□□□□ 0.36
ARHGEF1-214ENST00000596957 ARHGEF6Q15052 776 aa17.27■□□□□ 0.36
ARHGEF1-214ENST00000596957 NTRK3Q16288 839 aa17.27■□□□□ 0.36
ARHGEF1-214ENST00000596957 SHCBP1Q8NEM2 672 aa17.27■□□□□ 0.36
ARHGEF1-214ENST00000596957 WASF1Q92558 559 aa17.27■□□□□ 0.36
ARHGEF1-214ENST00000596957 GPKOWQ92917 476 aaPredicted RBP eCLIP17.27■□□□□ 0.36
ARHGEF1-214ENST00000596957 ERO1AQ96HE7 468 aa17.27■□□□□ 0.36
ARHGEF1-214ENST00000596957 LLPHQ9BRT6 129 aaKnown RBP17.27■□□□□ 0.36
ARHGEF1-214ENST00000596957 PORCNQ9H237 461 aa17.27■□□□□ 0.36
ARHGEF1-214ENST00000596957 ACAD9Q9H845 621 aa17.27■□□□□ 0.36
ARHGEF1-214ENST00000596957 ORC3Q9UBD5 711 aaPredicted RBP17.27■□□□□ 0.36
ARHGEF1-214ENST00000596957 FBXO40Q9UH90 709 aa17.27■□□□□ 0.36
ARHGEF1-214ENST00000596957 MRPL11Q9Y3B7 192 aaKnown RBP17.27■□□□□ 0.36
ARHGEF1-214ENST00000596957 CEP350Q5VT06 3117 aa17.26■□□□□ 0.35
ARHGEF1-214ENST00000596957 FOXN1O15353 648 aa17.26■□□□□ 0.35
ARHGEF1-214ENST00000596957 DTNBO60941 627 aa17.26■□□□□ 0.35
ARHGEF1-214ENST00000596957 DEXIO95424 95 aa17.26■□□□□ 0.35
ARHGEF1-214ENST00000596957 SCG2P13521 617 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms