RNA–Protein interactions for RNA: ENST00000596940.5

C19orf54-206, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 3

Gene C19orf54, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-206ENST00000596940 HOMER2Q9NSB8 354 aa16.58■□□□□ 0.24
C19orf54-206ENST00000596940 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.58■□□□□ 0.24
C19orf54-206ENST00000596940 PNMA2Q9UL42 364 aa16.58■□□□□ 0.24
C19orf54-206ENST00000596940 ZMYM6O95789 1325 aa16.58■□□□□ 0.24
C19orf54-206ENST00000596940 GREB1LQ9C091 1923 aaPredicted RBP16.57■□□□□ 0.24
C19orf54-206ENST00000596940 ASB14A6NK59 587 aa16.57■□□□□ 0.24
C19orf54-206ENST00000596940 HSPD1P10809 573 aaKnown RBP16.57■□□□□ 0.24
C19orf54-206ENST00000596940 TOP1P11387 765 aaKnown RBP16.57■□□□□ 0.24
C19orf54-206ENST00000596940 NOVP48745 357 aa16.57■□□□□ 0.24
C19orf54-206ENST00000596940 TLE2Q04725 743 aa16.57■□□□□ 0.24
C19orf54-206ENST00000596940 FAM227BQ96M60 508 aa16.57■□□□□ 0.24
C19orf54-206ENST00000596940 TRERF1Q96PN7 1200 aa16.57■□□□□ 0.24
C19orf54-206ENST00000596940 RNF41Q9H4P4 317 aaPredicted RBP16.57■□□□□ 0.24
C19orf54-206ENST00000596940 RNF146Q9NTX7 359 aa16.57■□□□□ 0.24
C19orf54-206ENST00000596940 TCP11L1Q9NUJ3 509 aa16.57■□□□□ 0.24
C19orf54-206ENST00000596940 A0A0D9SFI3 127 aa16.56■□□□□ 0.24
C19orf54-206ENST00000596940 DCDC2CA8MYV0 355 aa16.56■□□□□ 0.24
C19orf54-206ENST00000596940 HIP1O00291 1037 aa16.56■□□□□ 0.24
C19orf54-206ENST00000596940 NMT2O60551 498 aa16.56■□□□□ 0.24
C19orf54-206ENST00000596940 ADAMTS4O75173 837 aa16.56■□□□□ 0.24
C19orf54-206ENST00000596940 ACLYP53396 1101 aa16.56■□□□□ 0.24
C19orf54-206ENST00000596940 CCDC96Q2M329 555 aa16.56■□□□□ 0.24
C19orf54-206ENST00000596940 RRP12Q5JTH9 1297 aaKnown RBP16.56■□□□□ 0.24
C19orf54-206ENST00000596940 MFSD6Q6ZSS7 791 aa16.56■□□□□ 0.24
C19orf54-206ENST00000596940 KCTD1Q719H9 257 aa16.56■□□□□ 0.24
C19orf54-206ENST00000596940 ARMCX2Q7L311 632 aa16.56■□□□□ 0.24
C19orf54-206ENST00000596940 CHD1LQ86WJ1 897 aa16.56■□□□□ 0.24
C19orf54-206ENST00000596940 AGBL1Q96MI9 1066 aa16.56■□□□□ 0.24
C19orf54-206ENST00000596940 GLT1D1Q96MS3 346 aa16.56■□□□□ 0.24
C19orf54-206ENST00000596940 TTC14Q96N46 770 aa16.56■□□□□ 0.24
C19orf54-206ENST00000596940 TOX2Q96NM4 488 aa16.56■□□□□ 0.24
C19orf54-206ENST00000596940 INCENPQ9NQS7 918 aa16.56■□□□□ 0.24
C19orf54-206ENST00000596940 STARD7Q9NQZ5 370 aa16.56■□□□□ 0.24
C19orf54-206ENST00000596940 PRR12Q9ULL5 1215 aa16.56■□□□□ 0.24
C19orf54-206ENST00000596940 ALPK3Q96L96 1907 aa16.56■□□□□ 0.24
C19orf54-206ENST00000596940 CCDC171Q6TFL3 1326 aa16.55■□□□□ 0.24
C19orf54-206ENST00000596940 SYNRGQ9UMZ2 1314 aa16.55■□□□□ 0.24
C19orf54-206ENST00000596940 A0A1W2PQ45 241 aaPredicted RBP16.55■□□□□ 0.24
C19orf54-206ENST00000596940 A0A1W2PQY0 241 aa16.55■□□□□ 0.24
C19orf54-206ENST00000596940 CLTBP09497 229 aa16.55■□□□□ 0.24
C19orf54-206ENST00000596940 ALAS1P13196 640 aa16.55■□□□□ 0.24
C19orf54-206ENST00000596940 CST5P28325 142 aaPredicted RBP16.55■□□□□ 0.24
C19orf54-206ENST00000596940 NMIQ13287 307 aaPredicted RBP16.55■□□□□ 0.24
C19orf54-206ENST00000596940 CCDC144BQ3MJ40 725 aa16.55■□□□□ 0.24
C19orf54-206ENST00000596940 B4GALNT3Q6L9W6 998 aa16.55■□□□□ 0.24
C19orf54-206ENST00000596940 CCDC144CPQ8IYA2 1237 aa16.55■□□□□ 0.24
C19orf54-206ENST00000596940 FAM133AQ8N9E0 248 aa16.55■□□□□ 0.24
C19orf54-206ENST00000596940 KLHDC9Q8NEP7 349 aa16.55■□□□□ 0.24
C19orf54-206ENST00000596940 OSBPL3Q9H4L5 887 aa16.55■□□□□ 0.24
C19orf54-206ENST00000596940 A1CFQ9NQ94 594 aaKnown RBP16.55■□□□□ 0.24
C19orf54-206ENST00000596940 PDLIM7Q9NR12 457 aa16.55■□□□□ 0.24
C19orf54-206ENST00000596940 ZNF536O15090 1300 aa16.54■□□□□ 0.24
C19orf54-206ENST00000596940 ELP1O95163 1332 aa16.54■□□□□ 0.24
C19orf54-206ENST00000596940 MROH7Q68CQ1 1323 aa16.54■□□□□ 0.24
C19orf54-206ENST00000596940 C6orf222P0C671 652 aaPredicted RBP16.54■□□□□ 0.24
C19orf54-206ENST00000596940 SDSP20132 328 aa16.54■□□□□ 0.24
C19orf54-206ENST00000596940 NUCB1Q02818 461 aa16.54■□□□□ 0.24
C19orf54-206ENST00000596940 KCNA10Q16322 511 aa16.54■□□□□ 0.24
C19orf54-206ENST00000596940 CCDC178Q5BJE1 867 aa16.54■□□□□ 0.24
C19orf54-206ENST00000596940 AKNAD1Q5T1N1 836 aa16.54■□□□□ 0.24
C19orf54-206ENST00000596940 FAM109BQ6ICB4 259 aaPredicted RBP16.54■□□□□ 0.24
C19orf54-206ENST00000596940 CCDC174Q6PII3 467 aa16.54■□□□□ 0.24
C19orf54-206ENST00000596940 BADQ92934 168 aa16.54■□□□□ 0.24
C19orf54-206ENST00000596940 CCPG1Q9ULG6 757 aa16.54■□□□□ 0.24
C19orf54-206ENST00000596940 DNAH12Q6ZR08 3092 aa16.54■□□□□ 0.24
C19orf54-206ENST00000596940 TRIM43BA6NCK2 446 aa16.53■□□□□ 0.24
C19orf54-206ENST00000596940 PQBP1O60828 265 aaKnown RBP16.53■□□□□ 0.24
C19orf54-206ENST00000596940 ICAM1P05362 532 aa16.53■□□□□ 0.24
C19orf54-206ENST00000596940 RAG1P15918 1043 aa16.53■□□□□ 0.24
C19orf54-206ENST00000596940 GJA9P57773 515 aa16.53■□□□□ 0.24
C19orf54-206ENST00000596940 CNTN2Q02246 1040 aa16.53■□□□□ 0.24
C19orf54-206ENST00000596940 GNASQ5JWF2 1037 aa16.53■□□□□ 0.24
C19orf54-206ENST00000596940 BTNL9Q6UXG8 535 aa16.53■□□□□ 0.24
C19orf54-206ENST00000596940 NOL8Q76FK4 1167 aaKnown RBP16.53■□□□□ 0.24
C19orf54-206ENST00000596940 ANKRD33Q7Z3H0 272 aa16.53■□□□□ 0.24
C19orf54-206ENST00000596940 ESR2Q92731 530 aa16.53■□□□□ 0.24
C19orf54-206ENST00000596940 VTI1AQ96AJ9 217 aa16.53■□□□□ 0.24
C19orf54-206ENST00000596940 TRIM43Q96BQ3 446 aaPredicted RBP16.53■□□□□ 0.24
C19orf54-206ENST00000596940 CHMP4CQ96CF2 233 aa16.53■□□□□ 0.24
C19orf54-206ENST00000596940 TMEM47Q9BQJ4 181 aa16.53■□□□□ 0.24
C19orf54-206ENST00000596940 DIAPH3Q9NSV4 1193 aa16.53■□□□□ 0.24
C19orf54-206ENST00000596940 TMEM39AQ9NV64 488 aa16.53■□□□□ 0.24
C19orf54-206ENST00000596940 MTMR7Q9Y216 660 aa16.53■□□□□ 0.24
C19orf54-206ENST00000596940 PARP14Q460N5 1801 aa16.52■□□□□ 0.24
C19orf54-206ENST00000596940 ZNF213O14771 459 aa16.52■□□□□ 0.24
C19orf54-206ENST00000596940 KIAA0355O15063 1070 aa16.52■□□□□ 0.24
C19orf54-206ENST00000596940 TNFAIP2Q03169 654 aa16.52■□□□□ 0.24
C19orf54-206ENST00000596940 SYDE2Q5VT97 1194 aa16.52■□□□□ 0.24
C19orf54-206ENST00000596940 CCSAPQ6IQ19 270 aaPredicted RBP16.52■□□□□ 0.24
C19orf54-206ENST00000596940 ZNF589Q86UQ0 364 aaPredicted RBP16.52■□□□□ 0.24
C19orf54-206ENST00000596940 PLEKHM2Q8IWE5 1019 aa16.52■□□□□ 0.24
C19orf54-206ENST00000596940 SLC17A8Q8NDX2 589 aa16.52■□□□□ 0.24
C19orf54-206ENST00000596940 LENG1Q96BZ8 264 aaPredicted RBP16.52■□□□□ 0.24
C19orf54-206ENST00000596940 FGD4Q96M96 766 aa16.52■□□□□ 0.24
C19orf54-206ENST00000596940 UPF3AQ9H1J1 476 aaKnown RBP16.52■□□□□ 0.24
C19orf54-206ENST00000596940 RANBP17Q9H2T7 1088 aaKnown RBP16.52■□□□□ 0.24
C19orf54-206ENST00000596940 CYP39A1Q9NYL5 469 aa16.52■□□□□ 0.24
C19orf54-206ENST00000596940 ADD3Q9UEY8 706 aaKnown RBP16.52■□□□□ 0.24
C19orf54-206ENST00000596940 LOC102724159A0A0B4J2E5 919 aa16.51■□□□□ 0.23
C19orf54-206ENST00000596940 ZEB2O60315 1214 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms