RNA–Protein interactions for RNA: ENST00000596900.5

SPTBN4-210, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 1 (best)

Gene SPTBN4, Length 1,857 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-210ENST00000596900 FAM160B2Q86V87 743 aa26.28■■□□□ 1.8
SPTBN4-210ENST00000596900 DACT1Q9NYF0 836 aa26.28■■□□□ 1.8
SPTBN4-210ENST00000596900 KRI1Q8N9T8 703 aaKnown RBP26.28■■□□□ 1.8
SPTBN4-210ENST00000596900 FSIP1Q8NA03 581 aa26.28■■□□□ 1.8
SPTBN4-210ENST00000596900 AMNQ9BXJ7 453 aa26.28■■□□□ 1.8
SPTBN4-210ENST00000596900 CUTAO60888 179 aa26.27■■□□□ 1.8
SPTBN4-210ENST00000596900 USP14P54578 494 aa26.27■■□□□ 1.8
SPTBN4-210ENST00000596900 KLRG1Q96E93 195 aa26.27■■□□□ 1.8
SPTBN4-210ENST00000596900 GLIS2Q9BZE0 524 aaPredicted RBP26.27■■□□□ 1.8
SPTBN4-210ENST00000596900 NUP62CLQ9H1M0 184 aa26.27■■□□□ 1.8
SPTBN4-210ENST00000596900 SSC5DA1L4H1 1573 aa26.26■■□□□ 1.79
SPTBN4-210ENST00000596900 SYCE3A1L190 88 aa26.26■■□□□ 1.79
SPTBN4-210ENST00000596900 PPP1R11O60927 126 aaPredicted RBP26.26■■□□□ 1.79
SPTBN4-210ENST00000596900 MRPL12P52815 198 aaKnown RBP26.26■■□□□ 1.79
SPTBN4-210ENST00000596900 FAM160A1Q05DH4 1040 aa26.26■■□□□ 1.79
SPTBN4-210ENST00000596900 CCDC84Q86UT8 332 aaPredicted RBP26.26■■□□□ 1.79
SPTBN4-210ENST00000596900 RASGRP4Q8TDF6 673 aa26.26■■□□□ 1.79
SPTBN4-210ENST00000596900 CUL5Q93034 780 aa26.26■■□□□ 1.79
SPTBN4-210ENST00000596900 FEM1BQ9UK73 627 aa26.26■■□□□ 1.79
SPTBN4-210ENST00000596900 PRR12Q9ULL5 1215 aa26.26■■□□□ 1.79
SPTBN4-210ENST00000596900 WDR46O15213 610 aaKnown RBP26.25■■□□□ 1.79
SPTBN4-210ENST00000596900 CMA1P23946 247 aa26.25■■□□□ 1.79
SPTBN4-210ENST00000596900 NONOQ15233 471 aaKnown RBP eCLIP26.25■■□□□ 1.79
SPTBN4-210ENST00000596900 KIAA1755Q5JYT7 1200 aa26.25■■□□□ 1.79
SPTBN4-210ENST00000596900 AXDND1Q5T1B0 1012 aaPredicted RBP26.25■■□□□ 1.79
SPTBN4-210ENST00000596900 RIC8AQ9NPQ8 531 aa26.25■■□□□ 1.79
SPTBN4-210ENST00000596900 PCDHA1Q9Y5I3 950 aa26.25■■□□□ 1.79
SPTBN4-210ENST00000596900 GOLGA6L3A6NEY3 463 aa26.25■■□□□ 1.79
SPTBN4-210ENST00000596900 NR1I2O75469 434 aa26.25■■□□□ 1.79
SPTBN4-210ENST00000596900 NOM1Q5C9Z4 860 aaKnown RBP26.25■■□□□ 1.79
SPTBN4-210ENST00000596900 KRT26Q7Z3Y9 468 aa26.25■■□□□ 1.79
SPTBN4-210ENST00000596900 FBXO11Q86XK2 927 aa26.25■■□□□ 1.79
SPTBN4-210ENST00000596900 WDR18Q9BV38 432 aa26.25■■□□□ 1.79
SPTBN4-210ENST00000596900 NOL9Q5SY16 702 aaKnown RBP26.24■■□□□ 1.79
SPTBN4-210ENST00000596900 ADAMTS3O15072 1205 aa26.23■■□□□ 1.79
SPTBN4-210ENST00000596900 PPP1R12BO60237 982 aaPredicted RBP26.23■■□□□ 1.79
SPTBN4-210ENST00000596900 PTPREP23469 700 aa26.23■■□□□ 1.79
SPTBN4-210ENST00000596900 LRSAM1Q6UWE0 723 aa26.23■■□□□ 1.79
SPTBN4-210ENST00000596900 ZKSCAN4Q969J2 545 aaPredicted RBP26.23■■□□□ 1.79
SPTBN4-210ENST00000596900 KINO60870 393 aaKnown RBP26.23■■□□□ 1.79
SPTBN4-210ENST00000596900 PTPRAP18433 802 aa26.23■■□□□ 1.79
SPTBN4-210ENST00000596900 PSTPIP2Q9H939 334 aa26.23■■□□□ 1.79
SPTBN4-210ENST00000596900 SRPRBQ9Y5M8 271 aaKnown RBP26.23■■□□□ 1.79
SPTBN4-210ENST00000596900 NF2P35240 595 aa26.22■■□□□ 1.79
SPTBN4-210ENST00000596900 ZNF174Q15697 407 aa26.22■■□□□ 1.79
SPTBN4-210ENST00000596900 PNMA8AQ86V59 439 aaPredicted RBP26.22■■□□□ 1.79
SPTBN4-210ENST00000596900 ZNF280CQ8ND82 737 aa26.22■■□□□ 1.79
SPTBN4-210ENST00000596900 FERMT2Q96AC1 680 aa26.22■■□□□ 1.79
SPTBN4-210ENST00000596900 TNMDQ9H2S6 317 aa26.22■■□□□ 1.79
SPTBN4-210ENST00000596900 GOLPH3LQ9H4A5 285 aa26.22■■□□□ 1.79
SPTBN4-210ENST00000596900 WDR90Q96KV7 1748 aa26.22■■□□□ 1.79
SPTBN4-210ENST00000596900 ADM5C9JUS6 153 aa26.21■■□□□ 1.79
SPTBN4-210ENST00000596900 INF2Q27J81 1249 aa26.21■■□□□ 1.79
SPTBN4-210ENST00000596900 ZNF579Q8NAF0 562 aaKnown RBP26.21■■□□□ 1.79
SPTBN4-210ENST00000596900 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.21■■□□□ 1.79
SPTBN4-210ENST00000596900 CLSTN2Q9H4D0 955 aa26.21■■□□□ 1.79
SPTBN4-210ENST00000596900 BIN2Q9UBW5 565 aaPredicted RBP26.21■■□□□ 1.79
SPTBN4-210ENST00000596900 FBXO2Q9UK22 296 aaPredicted RBP26.21■■□□□ 1.79
SPTBN4-210ENST00000596900 A0A1B0GVL5 298 aa26.21■■□□□ 1.79
SPTBN4-210ENST00000596900 ATP2C1P98194 919 aaPredicted RBP26.21■■□□□ 1.79
SPTBN4-210ENST00000596900 MTMR2Q13614 643 aa26.21■■□□□ 1.79
SPTBN4-210ENST00000596900 MCTP2Q6DN12 878 aa26.21■■□□□ 1.79
SPTBN4-210ENST00000596900 ENGASEQ8NFI3 743 aa26.21■■□□□ 1.79
SPTBN4-210ENST00000596900 KIFC2Q96AC6 838 aa26.21■■□□□ 1.79
SPTBN4-210ENST00000596900 TAF1DQ9H5J8 278 aaPredicted RBP26.21■■□□□ 1.79
SPTBN4-210ENST00000596900 MCM7P33993 719 aa26.2■■□□□ 1.78
SPTBN4-210ENST00000596900 BACE1P56817 501 aa26.2■■□□□ 1.78
SPTBN4-210ENST00000596900 SPP2Q13103 211 aa26.2■■□□□ 1.78
SPTBN4-210ENST00000596900 ORC2Q13416 577 aaPredicted RBP26.2■■□□□ 1.78
SPTBN4-210ENST00000596900 JAKMIP3Q5VZ66 844 aa26.2■■□□□ 1.78
SPTBN4-210ENST00000596900 NEK8Q86SG6 692 aa26.2■■□□□ 1.78
SPTBN4-210ENST00000596900 TEX2Q8IWB9 1127 aa26.2■■□□□ 1.78
SPTBN4-210ENST00000596900 RANBP17Q9H2T7 1088 aaKnown RBP26.2■■□□□ 1.78
SPTBN4-210ENST00000596900 CTAGE5O15320 804 aa26.19■■□□□ 1.78
SPTBN4-210ENST00000596900 USP2O75604 605 aaPredicted RBP26.19■■□□□ 1.78
SPTBN4-210ENST00000596900 PTGDRQ13258 359 aa26.19■■□□□ 1.78
SPTBN4-210ENST00000596900 SNW1Q13573 536 aaKnown RBP26.19■■□□□ 1.78
SPTBN4-210ENST00000596900 MAP3K11Q16584 847 aa26.19■■□□□ 1.78
SPTBN4-210ENST00000596900 RESP18Q5W5W9 173 aa26.19■■□□□ 1.78
SPTBN4-210ENST00000596900 FSD2A1L4K1 749 aa26.19■■□□□ 1.78
SPTBN4-210ENST00000596900 C19orf81C9J6K1 198 aa26.19■■□□□ 1.78
SPTBN4-210ENST00000596900 PFKFB1P16118 471 aa26.19■■□□□ 1.78
SPTBN4-210ENST00000596900 NDUFA8P51970 172 aa26.19■■□□□ 1.78
SPTBN4-210ENST00000596900 L1TD1Q5T7N2 865 aaKnown RBP26.19■■□□□ 1.78
SPTBN4-210ENST00000596900 SHC4Q6S5L8 630 aa26.19■■□□□ 1.78
SPTBN4-210ENST00000596900 FMR1NBQ8N0W7 255 aaPredicted RBP26.19■■□□□ 1.78
SPTBN4-210ENST00000596900 FAM13BQ9NYF5 915 aa26.19■■□□□ 1.78
SPTBN4-210ENST00000596900 FZD1Q9UP38 647 aa26.19■■□□□ 1.78
SPTBN4-210ENST00000596900 ZHX2Q9Y6X8 837 aa26.19■■□□□ 1.78
SPTBN4-210ENST00000596900 PHIPQ8WWQ0 1821 aa26.19■■□□□ 1.78
SPTBN4-210ENST00000596900 LAD1O00515 517 aa26.18■■□□□ 1.78
SPTBN4-210ENST00000596900 WNT7AO00755 349 aa26.18■■□□□ 1.78
SPTBN4-210ENST00000596900 IREB2P48200 963 aaKnown RBP26.18■■□□□ 1.78
SPTBN4-210ENST00000596900 CLK2P49760 499 aaKnown RBP26.18■■□□□ 1.78
SPTBN4-210ENST00000596900 USH1GQ495M9 461 aa26.18■■□□□ 1.78
SPTBN4-210ENST00000596900 EAPPQ56P03 285 aaPredicted RBP26.18■■□□□ 1.78
SPTBN4-210ENST00000596900 ARL6IP4Q66PJ3 421 aaKnown RBP26.18■■□□□ 1.78
SPTBN4-210ENST00000596900 PRPF38AQ8NAV1 312 aaKnown RBP26.18■■□□□ 1.78
SPTBN4-210ENST00000596900 TBCKQ8TEA7 893 aa26.18■■□□□ 1.78
SPTBN4-210ENST00000596900 CLIC6Q96NY7 704 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms