RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 C2orf54Q08AI8 447 aa19.45■□□□□ 0.7
ARHGEF1-213ENST00000595897 DNAJC21Q5F1R6 531 aaKnown RBP19.45■□□□□ 0.7
ARHGEF1-213ENST00000595897 FAM76AQ8TAV0 307 aa19.45■□□□□ 0.7
ARHGEF1-213ENST00000595897 RASGRP4Q8TDF6 673 aa19.45■□□□□ 0.7
ARHGEF1-213ENST00000595897 GOLGA6BA6NDN3 693 aa19.44■□□□□ 0.7
ARHGEF1-213ENST00000595897 BRIP1Q9BX63 1249 aa19.44■□□□□ 0.7
ARHGEF1-213ENST00000595897 DCCP43146 1447 aa19.44■□□□□ 0.7
ARHGEF1-213ENST00000595897 A0A0G2JS52 829 aa19.44■□□□□ 0.7
ARHGEF1-213ENST00000595897 KLK7P49862 253 aa19.44■□□□□ 0.7
ARHGEF1-213ENST00000595897 SPA17Q15506 151 aa19.44■□□□□ 0.7
ARHGEF1-213ENST00000595897 MEA1Q16626 185 aa19.44■□□□□ 0.7
ARHGEF1-213ENST00000595897 CCNI2Q6ZMN8 369 aaPredicted RBP19.44■□□□□ 0.7
ARHGEF1-213ENST00000595897 BLIDQ8IZY5 108 aa19.44■□□□□ 0.7
ARHGEF1-213ENST00000595897 IPO4Q8TEX9 1081 aaKnown RBP19.44■□□□□ 0.7
ARHGEF1-213ENST00000595897 GPKOWQ92917 476 aaPredicted RBP eCLIP19.44■□□□□ 0.7
ARHGEF1-213ENST00000595897 SECISBP2LQ93073 1101 aaKnown RBP19.44■□□□□ 0.7
ARHGEF1-213ENST00000595897 MYH3P11055 1940 aa19.44■□□□□ 0.7
ARHGEF1-213ENST00000595897 CCDC194A0A1B0GVG4 234 aa19.44■□□□□ 0.7
ARHGEF1-213ENST00000595897 GOLGA6CA6NDK9 693 aa19.44■□□□□ 0.7
ARHGEF1-213ENST00000595897 PDE2AO00408 941 aaPredicted RBP19.44■□□□□ 0.7
ARHGEF1-213ENST00000595897 GOLGA6DP0CG33 693 aa19.44■□□□□ 0.7
ARHGEF1-213ENST00000595897 SRGNP10124 158 aa19.44■□□□□ 0.7
ARHGEF1-213ENST00000595897 MTIF2P46199 727 aaKnown RBP19.44■□□□□ 0.7
ARHGEF1-213ENST00000595897 CORO7P57737 925 aa19.44■□□□□ 0.7
ARHGEF1-213ENST00000595897 CCDC96Q2M329 555 aa19.44■□□□□ 0.7
ARHGEF1-213ENST00000595897 PPM1EQ8WY54 764 aa19.44■□□□□ 0.7
ARHGEF1-213ENST00000595897 NUP58Q9BVL2 599 aa19.44■□□□□ 0.7
ARHGEF1-213ENST00000595897 GOLGA6AQ9NYA3 693 aa19.44■□□□□ 0.7
ARHGEF1-213ENST00000595897 ANO9A1A5B4 782 aa19.43■□□□□ 0.7
ARHGEF1-213ENST00000595897 BRINP3Q76B58 766 aa19.43■□□□□ 0.7
ARHGEF1-213ENST00000595897 CCDC170Q8IYT3 715 aa19.43■□□□□ 0.7
ARHGEF1-213ENST00000595897 CCDC42Q96M95 316 aa19.43■□□□□ 0.7
ARHGEF1-213ENST00000595897 DRC1Q96MC2 740 aa19.43■□□□□ 0.7
ARHGEF1-213ENST00000595897 PCP11498 1178 aaKnown RBP19.43■□□□□ 0.7
ARHGEF1-213ENST00000595897 ZBED6P86452 979 aa19.43■□□□□ 0.7
ARHGEF1-213ENST00000595897 NAALADL2Q58DX5 795 aa19.43■□□□□ 0.7
ARHGEF1-213ENST00000595897 DISP2A7MBM2 1401 aa19.43■□□□□ 0.7
ARHGEF1-213ENST00000595897 TSPY2A6NKD2 308 aa19.42■□□□□ 0.7
ARHGEF1-213ENST00000595897 NUTM2BA6NNL0 878 aaPredicted RBP19.42■□□□□ 0.7
ARHGEF1-213ENST00000595897 NUTM2EB1AL46 878 aaPredicted RBP19.42■□□□□ 0.7
ARHGEF1-213ENST00000595897 KIF5BP33176 963 aa19.42■□□□□ 0.7
ARHGEF1-213ENST00000595897 EVX2Q03828 476 aa19.42■□□□□ 0.7
ARHGEF1-213ENST00000595897 KCNB1Q14721 858 aa19.42■□□□□ 0.7
ARHGEF1-213ENST00000595897 AEBP2Q6ZN18 517 aaPredicted RBP19.42■□□□□ 0.7
ARHGEF1-213ENST00000595897 C4orf32Q8N8J7 132 aa19.42■□□□□ 0.7
ARHGEF1-213ENST00000595897 MATR3P43243 847 aaKnown RBP eCLIP19.41■□□□□ 0.7
ARHGEF1-213ENST00000595897 NOP2P46087 812 aaKnown RBP19.41■□□□□ 0.7
ARHGEF1-213ENST00000595897 TTI2Q6NXR4 508 aa19.41■□□□□ 0.7
ARHGEF1-213ENST00000595897 RETREG2Q8NC44 543 aa19.41■□□□□ 0.7
ARHGEF1-213ENST00000595897 GIMAP8Q8ND71 665 aaPredicted RBP19.41■□□□□ 0.7
ARHGEF1-213ENST00000595897 NOC3LQ8WTT2 800 aaKnown RBP19.41■□□□□ 0.7
ARHGEF1-213ENST00000595897 CCDC47Q96A33 483 aaKnown RBP19.41■□□□□ 0.7
ARHGEF1-213ENST00000595897 NOC4LQ9BVI4 516 aaKnown RBP19.41■□□□□ 0.7
ARHGEF1-213ENST00000595897 FAM205AQ6ZU69 1335 aa19.41■□□□□ 0.7
ARHGEF1-213ENST00000595897 ZC3H4Q9UPT8 1303 aaKnown RBP19.41■□□□□ 0.7
ARHGEF1-213ENST00000595897 RHOBTB3O94955 611 aa19.41■□□□□ 0.7
ARHGEF1-213ENST00000595897 SLC4A8Q2Y0W8 1093 aa19.41■□□□□ 0.7
ARHGEF1-213ENST00000595897 CCDC178Q5BJE1 867 aa19.41■□□□□ 0.7
ARHGEF1-213ENST00000595897 ZNF662Q6ZS27 426 aa19.41■□□□□ 0.7
ARHGEF1-213ENST00000595897 SND1Q7KZF4 910 aaKnown RBP eCLIP19.41■□□□□ 0.7
ARHGEF1-213ENST00000595897 PACS2Q86VP3 889 aa19.41■□□□□ 0.7
ARHGEF1-213ENST00000595897 LRWD1Q9UFC0 647 aa19.41■□□□□ 0.7
ARHGEF1-213ENST00000595897 FAM184BQ9ULE4 1060 aa19.41■□□□□ 0.7
ARHGEF1-213ENST00000595897 MYH2Q9UKX2 1941 aa19.41■□□□□ 0.7
ARHGEF1-213ENST00000595897 CAVIN4Q5BKX8 364 aa19.41■□□□□ 0.7
ARHGEF1-213ENST00000595897 CNOT6LQ96LI5 555 aaKnown RBP19.41■□□□□ 0.7
ARHGEF1-213ENST00000595897 DOCK2Q92608 1830 aa19.4■□□□□ 0.7
ARHGEF1-213ENST00000595897 WTIPA6NIX2 430 aaPredicted RBP19.4■□□□□ 0.7
ARHGEF1-213ENST00000595897 USO1O60763 962 aaKnown RBP19.4■□□□□ 0.7
ARHGEF1-213ENST00000595897 KRT26Q7Z3Y9 468 aa19.4■□□□□ 0.7
ARHGEF1-213ENST00000595897 SMCR8Q8TEV9 937 aaPredicted RBP19.4■□□□□ 0.7
ARHGEF1-213ENST00000595897 TSGA10Q9BZW7 698 aa19.4■□□□□ 0.7
ARHGEF1-213ENST00000595897 PCDHA4Q9UN74 947 aa19.4■□□□□ 0.7
ARHGEF1-213ENST00000595897 AGPSO00116 658 aa19.4■□□□□ 0.7
ARHGEF1-213ENST00000595897 KLRC4O43908 158 aa19.4■□□□□ 0.7
ARHGEF1-213ENST00000595897 TACC1O75410 805 aa19.4■□□□□ 0.7
ARHGEF1-213ENST00000595897 VAV2P52735 878 aa19.4■□□□□ 0.7
ARHGEF1-213ENST00000595897 FKBP15Q5T1M5 1219 aa19.4■□□□□ 0.7
ARHGEF1-213ENST00000595897 FAM114A1Q8IWE2 563 aa19.4■□□□□ 0.7
ARHGEF1-213ENST00000595897 TRIM58Q8NG06 486 aa19.4■□□□□ 0.7
ARHGEF1-213ENST00000595897 DHTKD1Q96HY7 919 aaPredicted RBP19.4■□□□□ 0.7
ARHGEF1-213ENST00000595897 TTYH3Q9C0H2 523 aa19.4■□□□□ 0.7
ARHGEF1-213ENST00000595897 TMEM60Q9H2L4 133 aa19.4■□□□□ 0.7
ARHGEF1-213ENST00000595897 KAT14Q9H8E8 782 aa19.4■□□□□ 0.7
ARHGEF1-213ENST00000595897 BICDL2A1A5D9 508 aa19.39■□□□□ 0.7
ARHGEF1-213ENST00000595897 MYL1P05976 194 aa19.39■□□□□ 0.7
ARHGEF1-213ENST00000595897 PDE4DQ08499 809 aa19.39■□□□□ 0.7
ARHGEF1-213ENST00000595897 INF2Q27J81 1249 aa19.39■□□□□ 0.7
ARHGEF1-213ENST00000595897 FNBP4Q8N3X1 1017 aaPredicted RBP19.39■□□□□ 0.7
ARHGEF1-213ENST00000595897 IFIH1Q9BYX4 1025 aaKnown RBP19.39■□□□□ 0.7
ARHGEF1-213ENST00000595897 DEF6Q9H4E7 631 aa19.39■□□□□ 0.7
ARHGEF1-213ENST00000595897 MTMR7Q9Y216 660 aa19.39■□□□□ 0.7
ARHGEF1-213ENST00000595897 JRKLQ9Y4A0 524 aa19.39■□□□□ 0.7
ARHGEF1-213ENST00000595897 FGRP09769 529 aa19.39■□□□□ 0.69
ARHGEF1-213ENST00000595897 MRPS25P82663 173 aaKnown RBP19.39■□□□□ 0.69
ARHGEF1-213ENST00000595897 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.39■□□□□ 0.69
ARHGEF1-213ENST00000595897 EFCAB13Q8IY85 973 aa19.39■□□□□ 0.69
ARHGEF1-213ENST00000595897 P2RX5Q93086 422 aa19.39■□□□□ 0.69
ARHGEF1-213ENST00000595897 PSMB7Q99436 277 aa19.39■□□□□ 0.69
ARHGEF1-213ENST00000595897 DUSP9Q99956 384 aaKnown RBP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms