RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 MCM2P49736 904 aa26.17■■□□□ 1.78
SNRNP70-204ENST00000595231 ST3GAL1Q11201 340 aa26.17■■□□□ 1.78
SNRNP70-204ENST00000595231 CDC37Q16543 378 aaPredicted RBP26.17■■□□□ 1.78
SNRNP70-204ENST00000595231 NOM1Q5C9Z4 860 aaKnown RBP26.17■■□□□ 1.78
SNRNP70-204ENST00000595231 CPXCR1Q8N123 301 aa26.17■■□□□ 1.78
SNRNP70-204ENST00000595231 GTF3C6Q969F1 213 aa26.17■■□□□ 1.78
SNRNP70-204ENST00000595231 ZSCAN31Q96LW9 406 aaPredicted RBP26.17■■□□□ 1.78
SNRNP70-204ENST00000595231 PIGSQ96S52 555 aa26.17■■□□□ 1.78
SNRNP70-204ENST00000595231 SPATC1LQ9H0A9 340 aa26.17■■□□□ 1.78
SNRNP70-204ENST00000595231 RAVER2Q9HCJ3 691 aaKnown RBP26.17■■□□□ 1.78
SNRNP70-204ENST00000595231 CNTNAP5Q8WYK1 1306 aa26.16■■□□□ 1.78
SNRNP70-204ENST00000595231 SMCHD1A6NHR9 2005 aa26.16■■□□□ 1.78
SNRNP70-204ENST00000595231 GPR25O00155 361 aa26.16■■□□□ 1.78
SNRNP70-204ENST00000595231 OAZ1P54368 228 aa26.16■■□□□ 1.78
SNRNP70-204ENST00000595231 CCDC174Q6PII3 467 aa26.16■■□□□ 1.78
SNRNP70-204ENST00000595231 ZBTB5O15062 677 aa26.15■■□□□ 1.78
SNRNP70-204ENST00000595231 IFNAR1P17181 557 aa26.15■■□□□ 1.78
SNRNP70-204ENST00000595231 STAT3P40763 770 aa26.15■■□□□ 1.78
SNRNP70-204ENST00000595231 QRICH1Q2TAL8 776 aa26.15■■□□□ 1.78
SNRNP70-204ENST00000595231 AGBL1Q96MI9 1066 aa26.15■■□□□ 1.78
SNRNP70-204ENST00000595231 MOV10L1Q9BXT6 1211 aaKnown RBP26.15■■□□□ 1.78
SNRNP70-204ENST00000595231 ICAM1P05362 532 aa26.15■■□□□ 1.78
SNRNP70-204ENST00000595231 PLS1Q14651 629 aa26.15■■□□□ 1.78
SNRNP70-204ENST00000595231 HOMER1Q86YM7 354 aa26.15■■□□□ 1.78
SNRNP70-204ENST00000595231 TEX13BQ9BXU2 312 aa26.15■■□□□ 1.78
SNRNP70-204ENST00000595231 SH2B1Q9NRF2 756 aaPredicted RBP26.15■■□□□ 1.78
SNRNP70-204ENST00000595231 RIPK3Q9Y572 518 aa26.15■■□□□ 1.78
SNRNP70-204ENST00000595231 CTDP1Q9Y5B0 961 aaPredicted RBP26.15■■□□□ 1.78
SNRNP70-204ENST00000595231 MYH6P13533 1939 aa26.14■■□□□ 1.78
SNRNP70-204ENST00000595231 hCG_1642624A0A1W2PR95 340 aa26.14■■□□□ 1.78
SNRNP70-204ENST00000595231 PPP1R11O60927 126 aaPredicted RBP26.14■■□□□ 1.78
SNRNP70-204ENST00000595231 CTDNEP1O95476 244 aa26.14■■□□□ 1.78
SNRNP70-204ENST00000595231 HSPA1AP0DMV8 641 aaKnown RBP26.14■■□□□ 1.78
SNRNP70-204ENST00000595231 HSPA1BP0DMV9 641 aaKnown RBP26.14■■□□□ 1.78
SNRNP70-204ENST00000595231 SP3Q02447 781 aa26.14■■□□□ 1.78
SNRNP70-204ENST00000595231 PIBF1Q8WXW3 757 aa26.14■■□□□ 1.78
SNRNP70-204ENST00000595231 TMX3Q96JJ7 454 aa26.14■■□□□ 1.78
SNRNP70-204ENST00000595231 PORCNQ9H237 461 aa26.14■■□□□ 1.78
SNRNP70-204ENST00000595231 V9GY48 417 aaPredicted RBP26.14■■□□□ 1.78
SNRNP70-204ENST00000595231 PNMA6FA0A0J9YX94 578 aa26.13■■□□□ 1.77
SNRNP70-204ENST00000595231 FOXN1O15353 648 aa26.13■■□□□ 1.77
SNRNP70-204ENST00000595231 SNRNP48Q6IEG0 339 aaKnown RBP26.13■■□□□ 1.77
SNRNP70-204ENST00000595231 RIOX2Q8IUF8 465 aa26.13■■□□□ 1.77
SNRNP70-204ENST00000595231 PHKBQ93100 1093 aa26.13■■□□□ 1.77
SNRNP70-204ENST00000595231 RRP36Q96EU6 259 aaKnown RBP26.13■■□□□ 1.77
SNRNP70-204ENST00000595231 PPFIA3O75145 1194 aa26.12■■□□□ 1.77
SNRNP70-204ENST00000595231 CPLX1O14810 134 aa26.12■■□□□ 1.77
SNRNP70-204ENST00000595231 TAL1P17542 331 aaPredicted RBP26.12■■□□□ 1.77
SNRNP70-204ENST00000595231 ZNF296Q8WUU4 475 aaPredicted RBP26.12■■□□□ 1.77
SNRNP70-204ENST00000595231 SNX21Q969T3 373 aa26.12■■□□□ 1.77
SNRNP70-204ENST00000595231 CCPG1Q9ULG6 757 aa26.12■■□□□ 1.77
SNRNP70-204ENST00000595231 DTNBO60941 627 aa26.11■■□□□ 1.77
SNRNP70-204ENST00000595231 CTGFP29279 349 aa26.11■■□□□ 1.77
SNRNP70-204ENST00000595231 CCNA1P78396 465 aa26.11■■□□□ 1.77
SNRNP70-204ENST00000595231 LACTBP83111 547 aaPredicted RBP26.11■■□□□ 1.77
SNRNP70-204ENST00000595231 CAP1Q01518 475 aa26.11■■□□□ 1.77
SNRNP70-204ENST00000595231 CCDC83Q8IWF9 413 aa26.11■■□□□ 1.77
SNRNP70-204ENST00000595231 EFCC1Q9HA90 598 aa26.11■■□□□ 1.77
SNRNP70-204ENST00000595231 PRPF3O43395 683 aaKnown RBP26.1■■□□□ 1.77
SNRNP70-204ENST00000595231 ERCC3P19447 782 aa26.1■■□□□ 1.77
SNRNP70-204ENST00000595231 FBXO11Q86XK2 927 aa26.1■■□□□ 1.77
SNRNP70-204ENST00000595231 SHCBP1Q8NEM2 672 aa26.1■■□□□ 1.77
SNRNP70-204ENST00000595231 AMNQ9BXJ7 453 aa26.1■■□□□ 1.77
SNRNP70-204ENST00000595231 RNF26Q9BY78 433 aaPredicted RBP26.1■■□□□ 1.77
SNRNP70-204ENST00000595231 FKTNO75072 461 aa26.09■■□□□ 1.77
SNRNP70-204ENST00000595231 SLC25A27O95847 323 aa26.09■■□□□ 1.77
SNRNP70-204ENST00000595231 HSPA8P11142 646 aaKnown RBP26.09■■□□□ 1.77
SNRNP70-204ENST00000595231 SLC4A3P48751 1232 aa26.09■■□□□ 1.77
SNRNP70-204ENST00000595231 CPLX2Q6PUV4 134 aaKnown RBP26.09■■□□□ 1.77
SNRNP70-204ENST00000595231 SLC26A6Q9BXS9 759 aa26.09■■□□□ 1.77
SNRNP70-204ENST00000595231 SEC63Q9UGP8 760 aaKnown RBP26.09■■□□□ 1.77
SNRNP70-204ENST00000595231 FMNL1O95466 1100 aaPredicted RBP26.09■■□□□ 1.77
SNRNP70-204ENST00000595231 PKN1Q16512 942 aa26.09■■□□□ 1.77
SNRNP70-204ENST00000595231 USH1GQ495M9 461 aa26.09■■□□□ 1.77
SNRNP70-204ENST00000595231 NCAPG2Q86XI2 1143 aa26.09■■□□□ 1.77
SNRNP70-204ENST00000595231 ARHGAP39Q9C0H5 1083 aa26.09■■□□□ 1.77
SNRNP70-204ENST00000595231 PNMA2Q9UL42 364 aa26.09■■□□□ 1.77
SNRNP70-204ENST00000595231 ZSWIM8A7E2V4 1837 aa26.08■■□□□ 1.77
SNRNP70-204ENST00000595231 ECM2O94769 699 aaPredicted RBP26.08■■□□□ 1.77
SNRNP70-204ENST00000595231 ALAS1P13196 640 aa26.08■■□□□ 1.77
SNRNP70-204ENST00000595231 NSUN7Q8NE18 718 aaKnown RBP26.08■■□□□ 1.77
SNRNP70-204ENST00000595231 MROH8Q9H579 483 aa26.08■■□□□ 1.77
SNRNP70-204ENST00000595231 PCDHA1Q9Y5I3 950 aa26.08■■□□□ 1.77
SNRNP70-204ENST00000595231 CDKL5O76039 1030 aa26.07■■□□□ 1.76
SNRNP70-204ENST00000595231 MAPK4P31152 587 aa26.07■■□□□ 1.76
SNRNP70-204ENST00000595231 SSRP1Q08945 709 aaKnown RBP26.07■■□□□ 1.76
SNRNP70-204ENST00000595231 COA7Q96BR5 231 aa26.07■■□□□ 1.76
SNRNP70-204ENST00000595231 TRERF1Q96PN7 1200 aa26.07■■□□□ 1.76
SNRNP70-204ENST00000595231 HOMER2Q9NSB8 354 aa26.07■■□□□ 1.76
SNRNP70-204ENST00000595231 DOCK3Q8IZD9 2030 aa26.07■■□□□ 1.76
SNRNP70-204ENST00000595231 MGAMO43451 1857 aa26.07■■□□□ 1.76
SNRNP70-204ENST00000595231 PFKFB3Q16875 520 aaPredicted RBP26.06■■□□□ 1.76
SNRNP70-204ENST00000595231 TKFCQ3LXA3 575 aa26.06■■□□□ 1.76
SNRNP70-204ENST00000595231 MUM1L1Q5H9M0 696 aa26.06■■□□□ 1.76
SNRNP70-204ENST00000595231 CD99L2Q8TCZ2 262 aa26.06■■□□□ 1.76
SNRNP70-204ENST00000595231 CLEC4DQ8WXI8 215 aa26.06■■□□□ 1.76
SNRNP70-204ENST00000595231 TRIM47Q96LD4 638 aa26.06■■□□□ 1.76
SNRNP70-204ENST00000595231 JAK2O60674 1132 aa26.06■■□□□ 1.76
SNRNP70-204ENST00000595231 FDPSP14324 419 aaKnown RBP26.06■■□□□ 1.76
SNRNP70-204ENST00000595231 COPB2P35606 906 aa26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms