RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 DNAJC25-GNG10A0A024R161 153 aa20.82■□□□□ 0.92
SHKBP1-204ENST00000594862 B4E1Z4 1266 aa20.82■□□□□ 0.92
SHKBP1-204ENST00000594862 SNHG28P0DPA3 235 aa20.82■□□□□ 0.92
SHKBP1-204ENST00000594862 SLC4A3P48751 1232 aa20.82■□□□□ 0.92
SHKBP1-204ENST00000594862 ZSCAN10Q96SZ4 725 aaPredicted RBP20.82■□□□□ 0.92
SHKBP1-204ENST00000594862 IL25Q9H293 177 aa20.82■□□□□ 0.92
SHKBP1-204ENST00000594862 KAT14Q9H8E8 782 aa20.82■□□□□ 0.92
SHKBP1-204ENST00000594862 MTMR7Q9Y216 660 aa20.82■□□□□ 0.92
SHKBP1-204ENST00000594862 CNPY2Q9Y2B0 182 aa20.82■□□□□ 0.92
SHKBP1-204ENST00000594862 ICAM1P05362 532 aa20.81■□□□□ 0.92
SHKBP1-204ENST00000594862 ZNF543Q08ER8 600 aa20.81■□□□□ 0.92
SHKBP1-204ENST00000594862 BMP2KLQ5H9B9 411 aa20.81■□□□□ 0.92
SHKBP1-204ENST00000594862 SYDE2Q5VT97 1194 aa20.81■□□□□ 0.92
SHKBP1-204ENST00000594862 KIAA1211Q6ZU35 1233 aa20.81■□□□□ 0.92
SHKBP1-204ENST00000594862 ARRDC4Q8NCT1 418 aa20.81■□□□□ 0.92
SHKBP1-204ENST00000594862 RANBP17Q9H2T7 1088 aaKnown RBP20.81■□□□□ 0.92
SHKBP1-204ENST00000594862 RNF146Q9NTX7 359 aa20.81■□□□□ 0.92
SHKBP1-204ENST00000594862 COLQQ9Y215 455 aaPredicted RBP20.81■□□□□ 0.92
SHKBP1-204ENST00000594862 ZNF536O15090 1300 aa20.8■□□□□ 0.92
SHKBP1-204ENST00000594862 EVI5O60447 810 aa20.8■□□□□ 0.92
SHKBP1-204ENST00000594862 NEFLP07196 543 aa20.8■□□□□ 0.92
SHKBP1-204ENST00000594862 MAMDC4Q6UXC1 1216 aa20.8■□□□□ 0.92
SHKBP1-204ENST00000594862 PNMA1Q8ND90 353 aa20.8■□□□□ 0.92
SHKBP1-204ENST00000594862 TRPV1Q8NER1 839 aa20.8■□□□□ 0.92
SHKBP1-204ENST00000594862 DIS3LQ8TF46 1054 aaKnown RBP20.8■□□□□ 0.92
SHKBP1-204ENST00000594862 ZKSCAN3Q9BRR0 538 aa20.8■□□□□ 0.92
SHKBP1-204ENST00000594862 CCPG1Q9ULG6 757 aa20.8■□□□□ 0.92
SHKBP1-204ENST00000594862 TNKSO95271 1327 aa20.79■□□□□ 0.92
SHKBP1-204ENST00000594862 DNM1LO00429 736 aa20.79■□□□□ 0.92
SHKBP1-204ENST00000594862 MNX1P50219 401 aaPredicted RBP20.79■□□□□ 0.92
SHKBP1-204ENST00000594862 CCDC174Q6PII3 467 aa20.79■□□□□ 0.92
SHKBP1-204ENST00000594862 RALYLQ86SE5 291 aaKnown RBP20.79■□□□□ 0.92
SHKBP1-204ENST00000594862 TRERF1Q96PN7 1200 aa20.79■□□□□ 0.92
SHKBP1-204ENST00000594862 HOMER2Q9NSB8 354 aa20.79■□□□□ 0.92
SHKBP1-204ENST00000594862 ZSWIM5Q9P217 1185 aa20.79■□□□□ 0.92
SHKBP1-204ENST00000594862 FRMPD2Q68DX3 1309 aaPredicted RBP20.78■□□□□ 0.92
SHKBP1-204ENST00000594862 COL6A1P12109 1028 aa20.78■□□□□ 0.92
SHKBP1-204ENST00000594862 ALAS1P13196 640 aa20.78■□□□□ 0.92
SHKBP1-204ENST00000594862 ASPRV1Q53RT3 343 aa20.78■□□□□ 0.92
SHKBP1-204ENST00000594862 RASGRP2Q7LDG7 609 aa20.78■□□□□ 0.92
SHKBP1-204ENST00000594862 ENAHQ8N8S7 591 aaPredicted RBP20.78■□□□□ 0.92
SHKBP1-204ENST00000594862 CHMP4CQ96CF2 233 aa20.78■□□□□ 0.92
SHKBP1-204ENST00000594862 CCDC136Q96JN2 1154 aa20.78■□□□□ 0.92
SHKBP1-204ENST00000594862 AGBL1Q96MI9 1066 aa20.78■□□□□ 0.92
SHKBP1-204ENST00000594862 GPCPD1Q9NPB8 672 aa20.78■□□□□ 0.92
SHKBP1-204ENST00000594862 WDR19Q8NEZ3 1342 aa20.78■□□□□ 0.92
SHKBP1-204ENST00000594862 KBTBD13C9JR72 458 aa20.77■□□□□ 0.92
SHKBP1-204ENST00000594862 H0YGN5 161 aa20.77■□□□□ 0.92
SHKBP1-204ENST00000594862 POTEB2H3BUK9 544 aa20.77■□□□□ 0.92
SHKBP1-204ENST00000594862 CYP21A2P08686 494 aa20.77■□□□□ 0.92
SHKBP1-204ENST00000594862 RARBP10826 455 aa20.77■□□□□ 0.92
SHKBP1-204ENST00000594862 AKR1A1P14550 325 aa20.77■□□□□ 0.92
SHKBP1-204ENST00000594862 SART3Q15020 963 aaKnown RBP20.77■□□□□ 0.92
SHKBP1-204ENST00000594862 IFIT1BQ5T764 474 aaKnown RBP20.77■□□□□ 0.92
SHKBP1-204ENST00000594862 CASC1Q6TDU7 716 aa20.77■□□□□ 0.92
SHKBP1-204ENST00000594862 MAP4K1Q92918 833 aa20.77■□□□□ 0.92
SHKBP1-204ENST00000594862 A1CFQ9NQ94 594 aaKnown RBP20.77■□□□□ 0.92
SHKBP1-204ENST00000594862 ERICH2A1L162 156 aa20.76■□□□□ 0.91
SHKBP1-204ENST00000594862 SLC16A2P36021 539 aa20.76■□□□□ 0.91
SHKBP1-204ENST00000594862 PTH1RQ03431 593 aa20.76■□□□□ 0.91
SHKBP1-204ENST00000594862 TTBK2Q6IQ55 1244 aa20.76■□□□□ 0.91
SHKBP1-204ENST00000594862 NCOA7Q8NI08 942 aa20.76■□□□□ 0.91
SHKBP1-204ENST00000594862 ASB14A6NK59 587 aa20.75■□□□□ 0.91
SHKBP1-204ENST00000594862 FAM133AQ8N9E0 248 aa20.75■□□□□ 0.91
SHKBP1-204ENST00000594862 MAF1Q9H063 256 aa20.75■□□□□ 0.91
SHKBP1-204ENST00000594862 ABHD16BQ9H3Z7 469 aa20.75■□□□□ 0.91
SHKBP1-204ENST00000594862 LOC102724159A0A0B4J2E5 919 aa20.74■□□□□ 0.91
SHKBP1-204ENST00000594862 PARP1P09874 1014 aaKnown RBP20.74■□□□□ 0.91
SHKBP1-204ENST00000594862 PWP2Q15269 919 aaKnown RBP20.74■□□□□ 0.91
SHKBP1-204ENST00000594862 PRAMEF19Q5SWL8 479 aa20.74■□□□□ 0.91
SHKBP1-204ENST00000594862 ESYT1Q9BSJ8 1104 aa20.74■□□□□ 0.91
SHKBP1-204ENST00000594862 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.74■□□□□ 0.91
SHKBP1-204ENST00000594862 FAM184BQ9ULE4 1060 aa20.74■□□□□ 0.91
SHKBP1-204ENST00000594862 RBM8AQ9Y5S9 174 aaKnown RBP20.74■□□□□ 0.91
SHKBP1-204ENST00000594862 ALPK3Q96L96 1907 aa20.74■□□□□ 0.91
SHKBP1-204ENST00000594862 E7EWF7 191 aa20.73■□□□□ 0.91
SHKBP1-204ENST00000594862 ZNF865P0CJ78 1059 aaPredicted RBP20.73■□□□□ 0.91
SHKBP1-204ENST00000594862 ARMCX2Q7L311 632 aa20.73■□□□□ 0.91
SHKBP1-204ENST00000594862 RNF180Q86T96 592 aa20.73■□□□□ 0.91
SHKBP1-204ENST00000594862 XPNPEP3Q9NQH7 507 aa20.73■□□□□ 0.91
SHKBP1-204ENST00000594862 CYP39A1Q9NYL5 469 aa20.73■□□□□ 0.91
SHKBP1-204ENST00000594862 ADD3Q9UEY8 706 aaKnown RBP20.73■□□□□ 0.91
SHKBP1-204ENST00000594862 ZHX1Q9UKY1 873 aaPredicted RBP20.73■□□□□ 0.91
SHKBP1-204ENST00000594862 SNAI1O95863 264 aaPredicted RBP20.72■□□□□ 0.91
SHKBP1-204ENST00000594862 SNAP25P60880 206 aa20.72■□□□□ 0.91
SHKBP1-204ENST00000594862 SEC23AQ15436 765 aa20.72■□□□□ 0.91
SHKBP1-204ENST00000594862 NSMFQ6X4W1 530 aa20.72■□□□□ 0.91
SHKBP1-204ENST00000594862 MPHOSPH6Q99547 160 aaKnown RBP20.72■□□□□ 0.91
SHKBP1-204ENST00000594862 MTA3Q9BTC8 594 aa20.72■□□□□ 0.91
SHKBP1-204ENST00000594862 IFIT3O14879 490 aaKnown RBP20.71■□□□□ 0.91
SHKBP1-204ENST00000594862 GOLGA8HP0CJ92 632 aa20.71■□□□□ 0.91
SHKBP1-204ENST00000594862 ACVR2BQ13705 512 aa20.71■□□□□ 0.91
SHKBP1-204ENST00000594862 MUM1L1Q5H9M0 696 aa20.71■□□□□ 0.91
SHKBP1-204ENST00000594862 CYB5R4Q7L1T6 521 aa20.71■□□□□ 0.91
SHKBP1-204ENST00000594862 C7orf61Q8IZ16 206 aa20.71■□□□□ 0.91
SHKBP1-204ENST00000594862 FGD4Q96M96 766 aa20.71■□□□□ 0.91
SHKBP1-204ENST00000594862 SENP6Q9GZR1 1112 aaPredicted RBP20.71■□□□□ 0.91
SHKBP1-204ENST00000594862 DHX16O60231 1041 aaKnown RBP20.7■□□□□ 0.9
SHKBP1-204ENST00000594862 CDC45O75419 566 aa20.7■□□□□ 0.9
SHKBP1-204ENST00000594862 TRAF1Q13077 416 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms