RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 GDNFP39905 211 aa7.45□□□□□ -1.22
SMAD4-216ENST00000593223 AMPD2Q01433 879 aa7.45□□□□□ -1.22
SMAD4-216ENST00000593223 ZPBP2Q6X784 338 aa7.45□□□□□ -1.22
SMAD4-216ENST00000593223 ARHGEF39Q8N4T4 335 aa7.45□□□□□ -1.22
SMAD4-216ENST00000593223 OXR1Q8N573 874 aa7.45□□□□□ -1.22
SMAD4-216ENST00000593223 UBXN4Q92575 508 aa7.45□□□□□ -1.22
SMAD4-216ENST00000593223 AP5S1Q9NUS5 200 aa7.45□□□□□ -1.22
SMAD4-216ENST00000593223 CTNND2Q9UQB3 1225 aa7.45□□□□□ -1.22
SMAD4-216ENST00000593223 ZGLP1P0C6A0 271 aa7.44□□□□□ -1.22
SMAD4-216ENST00000593223 SLC12A9Q9BXP2 914 aa7.44□□□□□ -1.22
SMAD4-216ENST00000593223 EPN3Q9H201 632 aa7.44□□□□□ -1.22
SMAD4-216ENST00000593223 TMEM82A0PJX8 343 aa7.43□□□□□ -1.22
SMAD4-216ENST00000593223 BTBD11A6QL63 1104 aa7.43□□□□□ -1.22
SMAD4-216ENST00000593223 STXBP3O00186 592 aa7.43□□□□□ -1.22
SMAD4-216ENST00000593223 AFMP43652 599 aa7.43□□□□□ -1.22
SMAD4-216ENST00000593223 GRB10Q13322 594 aa7.43□□□□□ -1.22
SMAD4-216ENST00000593223 CBLL1Q75N03 491 aa7.43□□□□□ -1.22
SMAD4-216ENST00000593223 SPPL2CQ8IUH8 684 aa7.43□□□□□ -1.22
SMAD4-216ENST00000593223 PDZD8Q8NEN9 1154 aa7.43□□□□□ -1.22
SMAD4-216ENST00000593223 FCRL2Q96LA5 508 aaPredicted RBP7.43□□□□□ -1.22
SMAD4-216ENST00000593223 FCRL3Q96P31 734 aaPredicted RBP7.43□□□□□ -1.22
SMAD4-216ENST00000593223 LGR4Q9BXB1 951 aa7.43□□□□□ -1.22
SMAD4-216ENST00000593223 USP35Q9P2H5 1018 aa7.43□□□□□ -1.22
SMAD4-216ENST00000593223 GPR55Q9Y2T6 319 aaPredicted RBP7.43□□□□□ -1.22
SMAD4-216ENST00000593223 EMC9Q9Y3B6 208 aa7.43□□□□□ -1.22
SMAD4-216ENST00000593223 PDPK1O15530 556 aa7.42□□□□□ -1.22
SMAD4-216ENST00000593223 ITGAVP06756 1048 aa7.42□□□□□ -1.22
SMAD4-216ENST00000593223 IFNGR1P15260 489 aa7.42□□□□□ -1.22
SMAD4-216ENST00000593223 SLC14A2Q15849 920 aa7.42□□□□□ -1.22
SMAD4-216ENST00000593223 SLC10A6Q3KNW5 377 aa7.42□□□□□ -1.22
SMAD4-216ENST00000593223 RTP2Q5QGT7 225 aa7.42□□□□□ -1.22
SMAD4-216ENST00000593223 ATG4DQ86TL0 474 aaPredicted RBP7.42□□□□□ -1.22
SMAD4-216ENST00000593223 ZNF513Q8N8E2 541 aaPredicted RBP7.42□□□□□ -1.22
SMAD4-216ENST00000593223 ANKS4BQ8N8V4 417 aa7.42□□□□□ -1.22
SMAD4-216ENST00000593223 C19orf73Q9NVV2 129 aa7.42□□□□□ -1.22
SMAD4-216ENST00000593223 FITM1A5D6W6 292 aa7.41□□□□□ -1.22
SMAD4-216ENST00000593223 USP2O75604 605 aaPredicted RBP7.41□□□□□ -1.22
SMAD4-216ENST00000593223 SEPHS1P49903 392 aa7.41□□□□□ -1.22
SMAD4-216ENST00000593223 ERVFC1P60507 584 aa7.41□□□□□ -1.22
SMAD4-216ENST00000593223 CHRNEQ04844 493 aa7.41□□□□□ -1.22
SMAD4-216ENST00000593223 CEP128Q6ZU80 1094 aa7.41□□□□□ -1.22
SMAD4-216ENST00000593223 ZNF227Q86WZ6 799 aa7.41□□□□□ -1.22
SMAD4-216ENST00000593223 TRIM59Q8IWR1 403 aa7.41□□□□□ -1.22
SMAD4-216ENST00000593223 FLAD1Q8NFF5 587 aa7.41□□□□□ -1.22
SMAD4-216ENST00000593223 MYLIPQ8WY64 445 aa7.41□□□□□ -1.22
SMAD4-216ENST00000593223 MAP6Q96JE9 813 aa7.41□□□□□ -1.22
SMAD4-216ENST00000593223 SRPK1Q96SB4 655 aaKnown RBP7.41□□□□□ -1.22
SMAD4-216ENST00000593223 CWC22Q9HCG8 908 aaKnown RBP7.41□□□□□ -1.22
SMAD4-216ENST00000593223 ZNF281Q9Y2X9 895 aa7.41□□□□□ -1.22
SMAD4-216ENST00000593223 IQCA1LA6NCM1 817 aa7.4□□□□□ -1.22
SMAD4-216ENST00000593223 C2orf71A6NGG8 1288 aa7.4□□□□□ -1.22
SMAD4-216ENST00000593223 AURKAO14965 403 aa7.4□□□□□ -1.22
SMAD4-216ENST00000593223 TAL1P17542 331 aaPredicted RBP7.4□□□□□ -1.22
SMAD4-216ENST00000593223 IFRD2Q12894 506 aaPredicted RBP7.4□□□□□ -1.22
SMAD4-216ENST00000593223 MTERF2Q49AM1 385 aa7.4□□□□□ -1.22
SMAD4-216ENST00000593223 GTF2IRD2BQ6EKJ0 949 aa7.4□□□□□ -1.22
SMAD4-216ENST00000593223 GTF2IRD2Q86UP8 949 aa7.4□□□□□ -1.22
SMAD4-216ENST00000593223 KSR1Q8IVT5 923 aa7.4□□□□□ -1.22
SMAD4-216ENST00000593223 ST13P5Q8NFI4 369 aaPredicted RBP7.4□□□□□ -1.22
SMAD4-216ENST00000593223 ABHD4Q8TB40 342 aa7.4□□□□□ -1.22
SMAD4-216ENST00000593223 BTN2A2Q8WVV5 523 aa7.4□□□□□ -1.22
SMAD4-216ENST00000593223 LINC01599Q8WXQ3 324 aa7.4□□□□□ -1.22
SMAD4-216ENST00000593223 KIRREL1Q96J84 757 aa7.4□□□□□ -1.22
SMAD4-216ENST00000593223 MCMBPQ9BTE3 642 aa7.4□□□□□ -1.22
SMAD4-216ENST00000593223 CCDC113Q9H0I3 377 aa7.4□□□□□ -1.22
SMAD4-216ENST00000593223 C19orf44Q9H6X5 657 aa7.4□□□□□ -1.22
SMAD4-216ENST00000593223 ERVK13-1Q9NX77 482 aa7.4□□□□□ -1.22
SMAD4-216ENST00000593223 TNFRSF10DQ9UBN6 386 aa7.4□□□□□ -1.22
SMAD4-216ENST00000593223 EBF1Q9UH73 591 aa7.4□□□□□ -1.22
SMAD4-216ENST00000593223 BACE2Q9Y5Z0 518 aa7.4□□□□□ -1.22
SMAD4-216ENST00000593223 NACADO15069 1562 aa7.4□□□□□ -1.22
SMAD4-216ENST00000593223 TBC1D8O95759 1140 aa7.39□□□□□ -1.23
SMAD4-216ENST00000593223 HPXP02790 462 aa7.39□□□□□ -1.23
SMAD4-216ENST00000593223 JUNBP17275 347 aaPredicted RBP7.39□□□□□ -1.23
SMAD4-216ENST00000593223 TRHRP34981 398 aaPredicted RBP7.39□□□□□ -1.23
SMAD4-216ENST00000593223 KIR2DL1P43626 348 aaPredicted RBP7.39□□□□□ -1.23
SMAD4-216ENST00000593223 KIR2DL2P43627 348 aaPredicted RBP7.39□□□□□ -1.23
SMAD4-216ENST00000593223 SERINC3Q13530 473 aa7.39□□□□□ -1.23
SMAD4-216ENST00000593223 RASGRF1Q13972 1273 aa7.39□□□□□ -1.23
SMAD4-216ENST00000593223 JAMLQ86YT9 394 aa7.39□□□□□ -1.23
SMAD4-216ENST00000593223 HHIPL1Q96JK4 782 aa7.39□□□□□ -1.23
SMAD4-216ENST00000593223 MRGPRX3Q96LB0 322 aa7.39□□□□□ -1.23
SMAD4-216ENST00000593223 DEPDC7Q96QD5 511 aa7.39□□□□□ -1.23
SMAD4-216ENST00000593223 G6PC3Q9BUM1 346 aa7.39□□□□□ -1.23
SMAD4-216ENST00000593223 OSBPL2Q9H1P3 480 aa7.39□□□□□ -1.23
SMAD4-216ENST00000593223 GPR160Q9UJ42 338 aa7.39□□□□□ -1.23
SMAD4-216ENST00000593223 MSRB2Q9Y3D2 182 aa7.39□□□□□ -1.23
SMAD4-216ENST00000593223 EIF4G1Q04637 1599 aaKnown RBP7.38□□□□□ -1.23
SMAD4-216ENST00000593223 A0A1W2PQ27 194 aa7.38□□□□□ -1.23
SMAD4-216ENST00000593223 A0A1W2PQ64 194 aa7.38□□□□□ -1.23
SMAD4-216ENST00000593223 A0A1W2PQC6 194 aa7.38□□□□□ -1.23
SMAD4-216ENST00000593223 A0A1W2PQD8 194 aa7.38□□□□□ -1.23
SMAD4-216ENST00000593223 FGF10O15520 208 aaPredicted RBP7.38□□□□□ -1.23
SMAD4-216ENST00000593223 TBX1O43435 398 aa7.38□□□□□ -1.23
SMAD4-216ENST00000593223 KCNJ6P48051 423 aa7.38□□□□□ -1.23
SMAD4-216ENST00000593223 RTP1P59025 263 aa7.38□□□□□ -1.23
SMAD4-216ENST00000593223 SCRN1Q12765 414 aa7.38□□□□□ -1.23
SMAD4-216ENST00000593223 KCNMB1Q16558 191 aa7.38□□□□□ -1.23
SMAD4-216ENST00000593223 TMEM67Q5HYA8 995 aa7.38□□□□□ -1.23
SMAD4-216ENST00000593223 FYB2Q5VWT5 728 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms