RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 PORCNQ9H237 461 aa19.32■□□□□ 0.68
GCDH-213ENST00000590627 RABGAP1Q9Y3P9 1069 aa19.32■□□□□ 0.68
GCDH-213ENST00000590627 USP17L15C9J2P7 530 aa19.31■□□□□ 0.68
GCDH-213ENST00000590627 USP17L13C9JLJ4 530 aa19.31■□□□□ 0.68
GCDH-213ENST00000590627 USP17L11C9JVI0 530 aa19.31■□□□□ 0.68
GCDH-213ENST00000590627 USP17L18D6R9N7 530 aa19.31■□□□□ 0.68
GCDH-213ENST00000590627 USP17L22D6RA61 530 aa19.31■□□□□ 0.68
GCDH-213ENST00000590627 USP17L17D6RBQ6 530 aa19.31■□□□□ 0.68
GCDH-213ENST00000590627 USP17L19D6RCP7 530 aa19.31■□□□□ 0.68
GCDH-213ENST00000590627 USP17L20D6RJB6 530 aa19.31■□□□□ 0.68
GCDH-213ENST00000590627 PEX10O60683 326 aa19.31■□□□□ 0.68
GCDH-213ENST00000590627 LARGE1O95461 756 aa19.31■□□□□ 0.68
GCDH-213ENST00000590627 PRKAR2AP13861 404 aaKnown RBP19.31■□□□□ 0.68
GCDH-213ENST00000590627 RGS2P41220 211 aa19.31■□□□□ 0.68
GCDH-213ENST00000590627 MNX1P50219 401 aaPredicted RBP19.31■□□□□ 0.68
GCDH-213ENST00000590627 ATP2B2Q01814 1243 aa19.31■□□□□ 0.68
GCDH-213ENST00000590627 USP17L24Q0WX57 530 aa19.31■□□□□ 0.68
GCDH-213ENST00000590627 CUL4AQ13619 759 aa19.31■□□□□ 0.68
GCDH-213ENST00000590627 PLEKHH3Q7Z736 793 aa19.31■□□□□ 0.68
GCDH-213ENST00000590627 LRRC47Q8N1G4 583 aaKnown RBP19.31■□□□□ 0.68
GCDH-213ENST00000590627 ACER1Q8TDN7 264 aa19.31■□□□□ 0.68
GCDH-213ENST00000590627 CHMP4CQ96CF2 233 aa19.31■□□□□ 0.68
GCDH-213ENST00000590627 FEZ1Q99689 392 aa19.31■□□□□ 0.68
GCDH-213ENST00000590627 PAGR1Q9BTK6 254 aa19.31■□□□□ 0.68
GCDH-213ENST00000590627 KIAA1683Q9H0B3 1180 aa19.31■□□□□ 0.68
GCDH-213ENST00000590627 SLKQ9H2G2 1235 aaPredicted RBP19.31■□□□□ 0.68
GCDH-213ENST00000590627 SNHG28P0DPA3 235 aa19.3■□□□□ 0.68
GCDH-213ENST00000590627 CCNA1P78396 465 aa19.3■□□□□ 0.68
GCDH-213ENST00000590627 MORN1Q5T089 497 aa19.3■□□□□ 0.68
GCDH-213ENST00000590627 POTEEQ6S8J3 1075 aa19.3■□□□□ 0.68
GCDH-213ENST00000590627 MICU3Q86XE3 530 aa19.3■□□□□ 0.68
GCDH-213ENST00000590627 FANCBQ8NB91 859 aa19.3■□□□□ 0.68
GCDH-213ENST00000590627 GTF3C6Q969F1 213 aa19.3■□□□□ 0.68
GCDH-213ENST00000590627 MYL10Q9BUA6 226 aa19.3■□□□□ 0.68
GCDH-213ENST00000590627 LAMA3Q16787 3333 aa19.3■□□□□ 0.68
GCDH-213ENST00000590627 METAP2P50579 478 aaKnown RBP eCLIP19.29■□□□□ 0.68
GCDH-213ENST00000590627 SCRN1Q12765 414 aa19.29■□□□□ 0.68
GCDH-213ENST00000590627 GRM4Q14833 912 aa19.29■□□□□ 0.68
GCDH-213ENST00000590627 LBX2Q6XYB7 198 aa19.29■□□□□ 0.68
GCDH-213ENST00000590627 CATSPERGQ6ZRH7 1159 aa19.29■□□□□ 0.68
GCDH-213ENST00000590627 NUP133Q8WUM0 1156 aa19.29■□□□□ 0.68
GCDH-213ENST00000590627 APBA2Q99767 749 aa19.29■□□□□ 0.68
GCDH-213ENST00000590627 C11orf49Q9H6J7 331 aa19.29■□□□□ 0.68
GCDH-213ENST00000590627 VCPKMTQ9H867 229 aa19.29■□□□□ 0.68
GCDH-213ENST00000590627 FAM217BQ9NTX9 383 aaPredicted RBP19.29■□□□□ 0.68
GCDH-213ENST00000590627 NAP1L2Q9ULW6 460 aaPredicted RBP19.29■□□□□ 0.68
GCDH-213ENST00000590627 CCDC196A0A1B0GTZ2 297 aa19.28■□□□□ 0.68
GCDH-213ENST00000590627 GOLGA8AA7E2F4 631 aa19.28■□□□□ 0.68
GCDH-213ENST00000590627 F5H6K3 240 aa19.28■□□□□ 0.68
GCDH-213ENST00000590627 PDHBP11177 359 aa19.28■□□□□ 0.68
GCDH-213ENST00000590627 BMP8BP34820 402 aa19.28■□□□□ 0.68
GCDH-213ENST00000590627 KLRC3Q07444 240 aa19.28■□□□□ 0.68
GCDH-213ENST00000590627 CACNB2Q08289 660 aaPredicted RBP19.28■□□□□ 0.68
GCDH-213ENST00000590627 ST3GAL1Q11201 340 aa19.28■□□□□ 0.68
GCDH-213ENST00000590627 ZYXQ15942 572 aaKnown RBP19.28■□□□□ 0.68
GCDH-213ENST00000590627 NECAB1Q8N987 351 aa19.28■□□□□ 0.68
GCDH-213ENST00000590627 DCAF4Q8WV16 495 aa19.28■□□□□ 0.68
GCDH-213ENST00000590627 GMCL1Q96IK5 515 aa19.28■□□□□ 0.68
GCDH-213ENST00000590627 GDF15Q99988 308 aa19.28■□□□□ 0.68
GCDH-213ENST00000590627 GOPCQ9HD26 462 aa19.28■□□□□ 0.68
GCDH-213ENST00000590627 RBM28Q9NW13 759 aaKnown RBP19.28■□□□□ 0.68
GCDH-213ENST00000590627 PALM3A6NDB9 673 aaPredicted RBP19.27■□□□□ 0.68
GCDH-213ENST00000590627 DHX16O60231 1041 aaKnown RBP19.27■□□□□ 0.68
GCDH-213ENST00000590627 CNMDO75829 334 aa19.27■□□□□ 0.68
GCDH-213ENST00000590627 NDUFB10O96000 172 aa19.27■□□□□ 0.68
GCDH-213ENST00000590627 VCAM1P19320 739 aa19.27■□□□□ 0.68
GCDH-213ENST00000590627 KIF5BP33176 963 aa19.27■□□□□ 0.68
GCDH-213ENST00000590627 MAP2K5Q13163 448 aa19.27■□□□□ 0.68
GCDH-213ENST00000590627 STK3Q13188 491 aa19.27■□□□□ 0.68
GCDH-213ENST00000590627 RTN1Q16799 776 aa19.27■□□□□ 0.68
GCDH-213ENST00000590627 SLFN13Q68D06 897 aa19.27■□□□□ 0.68
GCDH-213ENST00000590627 C7orf61Q8IZ16 206 aa19.27■□□□□ 0.68
GCDH-213ENST00000590627 CTCFLQ8NI51 663 aaPredicted RBP19.27■□□□□ 0.68
GCDH-213ENST00000590627 LPAR1Q92633 364 aa19.27■□□□□ 0.68
GCDH-213ENST00000590627 CWC22Q9HCG8 908 aaKnown RBP19.27■□□□□ 0.68
GCDH-213ENST00000590627 MYH4Q9Y623 1939 aa19.26■□□□□ 0.67
GCDH-213ENST00000590627 PARP1P09874 1014 aaKnown RBP19.26■□□□□ 0.67
GCDH-213ENST00000590627 RXRAP19793 462 aa19.26■□□□□ 0.67
GCDH-213ENST00000590627 CDC27P30260 824 aa19.26■□□□□ 0.67
GCDH-213ENST00000590627 GNAQP50148 359 aa19.26■□□□□ 0.67
GCDH-213ENST00000590627 CCT2P78371 535 aaKnown RBP19.26■□□□□ 0.67
GCDH-213ENST00000590627 ZNF543Q08ER8 600 aa19.26■□□□□ 0.67
GCDH-213ENST00000590627 CCL14Q16627 93 aa19.26■□□□□ 0.67
GCDH-213ENST00000590627 ASPRV1Q53RT3 343 aa19.26■□□□□ 0.67
GCDH-213ENST00000590627 RAB11FIP4Q86YS3 637 aa19.26■□□□□ 0.67
GCDH-213ENST00000590627 INTS4Q96HW7 963 aaKnown RBP19.26■□□□□ 0.67
GCDH-213ENST00000590627 MAD2L2Q9UI95 211 aa19.26■□□□□ 0.67
GCDH-213ENST00000590627 COL6A1P12109 1028 aa19.25■□□□□ 0.67
GCDH-213ENST00000590627 SMARCA1P28370 1054 aa19.25■□□□□ 0.67
GCDH-213ENST00000590627 NTRK3Q16288 839 aa19.25■□□□□ 0.67
GCDH-213ENST00000590627 KIAA1755Q5JYT7 1200 aa19.25■□□□□ 0.67
GCDH-213ENST00000590627 GPATCH4Q5T3I0 446 aaKnown RBP19.25■□□□□ 0.67
GCDH-213ENST00000590627 LHX8Q68G74 356 aa19.25■□□□□ 0.67
GCDH-213ENST00000590627 CCDC83Q8IWF9 413 aa19.25■□□□□ 0.67
GCDH-213ENST00000590627 LZTS2Q9BRK4 669 aa19.25■□□□□ 0.67
GCDH-213ENST00000590627 LLPHQ9BRT6 129 aaKnown RBP19.25■□□□□ 0.67
GCDH-213ENST00000590627 NCOA5Q9HCD5 579 aaKnown RBP19.25■□□□□ 0.67
GCDH-213ENST00000590627 PFASO15067 1338 aa19.25■□□□□ 0.67
GCDH-213ENST00000590627 SLC15A5A6NIM6 579 aa19.24■□□□□ 0.67
GCDH-213ENST00000590627 HOXC6P09630 235 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms