RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 TRPA1O75762 1119 aa13.98□□□□□ -0.17
APOC1-206ENST00000590334 CDKL5O76039 1030 aa13.98□□□□□ -0.17
APOC1-206ENST00000590334 CTDNEP1O95476 244 aa13.98□□□□□ -0.17
APOC1-206ENST00000590334 CUL4AQ13619 759 aa13.98□□□□□ -0.17
APOC1-206ENST00000590334 CDC37Q16543 378 aaPredicted RBP13.98□□□□□ -0.17
APOC1-206ENST00000590334 FAM110CQ1W6H9 321 aa13.98□□□□□ -0.17
APOC1-206ENST00000590334 NOM1Q5C9Z4 860 aaKnown RBP13.98□□□□□ -0.17
APOC1-206ENST00000590334 CPLX2Q6PUV4 134 aaKnown RBP13.98□□□□□ -0.17
APOC1-206ENST00000590334 LLPHQ9BRT6 129 aaKnown RBP13.98□□□□□ -0.17
APOC1-206ENST00000590334 RNF26Q9BY78 433 aaPredicted RBP13.98□□□□□ -0.17
APOC1-206ENST00000590334 TXNRD2Q9NNW7 524 aa13.98□□□□□ -0.17
APOC1-206ENST00000590334 PNMA2Q9UL42 364 aa13.98□□□□□ -0.17
APOC1-206ENST00000590334 ZSWIM8A7E2V4 1837 aa13.98□□□□□ -0.17
APOC1-206ENST00000590334 STK36Q9NRP7 1315 aa13.97□□□□□ -0.17
APOC1-206ENST00000590334 K7ELQ4 463 aaPredicted RBP13.97□□□□□ -0.17
APOC1-206ENST00000590334 CPLX1O14810 134 aa13.97□□□□□ -0.17
APOC1-206ENST00000590334 PRPF3O43395 683 aaKnown RBP13.97□□□□□ -0.17
APOC1-206ENST00000590334 FMNL1O95466 1100 aaPredicted RBP13.97□□□□□ -0.17
APOC1-206ENST00000590334 ICAM1P05362 532 aa13.97□□□□□ -0.17
APOC1-206ENST00000590334 ERVK-9P63128 1117 aa13.97□□□□□ -0.17
APOC1-206ENST00000590334 ERVK-24P63145 666 aa13.97□□□□□ -0.17
APOC1-206ENST00000590334 QRICH1Q2TAL8 776 aa13.97□□□□□ -0.17
APOC1-206ENST00000590334 SAMD1Q6SPF0 538 aaPredicted RBP13.97□□□□□ -0.17
APOC1-206ENST00000590334 CCDC82Q8N4S0 544 aa13.97□□□□□ -0.17
APOC1-206ENST00000590334 ANKRD13CQ8N6S4 541 aa13.97□□□□□ -0.17
APOC1-206ENST00000590334 NSUN7Q8NE18 718 aaKnown RBP13.97□□□□□ -0.17
APOC1-206ENST00000590334 GPRC5AQ8NFJ5 357 aa13.97□□□□□ -0.17
APOC1-206ENST00000590334 RRP36Q96EU6 259 aaKnown RBP13.97□□□□□ -0.17
APOC1-206ENST00000590334 PIGSQ96S52 555 aa13.97□□□□□ -0.17
APOC1-206ENST00000590334 SPATC1LQ9H0A9 340 aa13.97□□□□□ -0.17
APOC1-206ENST00000590334 R3HDMLQ9H3Y0 253 aa13.97□□□□□ -0.17
APOC1-206ENST00000590334 VAT1LQ9HCJ6 419 aa13.97□□□□□ -0.17
APOC1-206ENST00000590334 RBM27Q9P2N5 1060 aaKnown RBP13.97□□□□□ -0.17
APOC1-206ENST00000590334 PLXNA1Q9UIW2 1896 aa13.97□□□□□ -0.17
APOC1-206ENST00000590334 PPP1R11O60927 126 aaPredicted RBP13.96□□□□□ -0.17
APOC1-206ENST00000590334 TBC1D8O95759 1140 aa13.96□□□□□ -0.17
APOC1-206ENST00000590334 SNAP25P60880 206 aa13.96□□□□□ -0.17
APOC1-206ENST00000590334 SSRP1Q08945 709 aaKnown RBP13.96□□□□□ -0.17
APOC1-206ENST00000590334 TRAF1Q13077 416 aa13.96□□□□□ -0.17
APOC1-206ENST00000590334 Q3C1V9 767 aa13.96□□□□□ -0.17
APOC1-206ENST00000590334 RIOX2Q8IUF8 465 aa13.96□□□□□ -0.17
APOC1-206ENST00000590334 CCDC83Q8IWF9 413 aa13.96□□□□□ -0.17
APOC1-206ENST00000590334 SMARCC2Q8TAQ2 1214 aa13.96□□□□□ -0.17
APOC1-206ENST00000590334 PHKBQ93100 1093 aa13.96□□□□□ -0.17
APOC1-206ENST00000590334 PAGR1Q9BTK6 254 aa13.96□□□□□ -0.17
APOC1-206ENST00000590334 BEGAINQ9BUH8 593 aa13.96□□□□□ -0.17
APOC1-206ENST00000590334 TEX13BQ9BXU2 312 aa13.96□□□□□ -0.17
APOC1-206ENST00000590334 CPA4Q9UI42 421 aa13.96□□□□□ -0.17
APOC1-206ENST00000590334 CTDP1Q9Y5B0 961 aaPredicted RBP13.96□□□□□ -0.17
APOC1-206ENST00000590334 V9GY48 417 aaPredicted RBP13.96□□□□□ -0.17
APOC1-206ENST00000590334 LCTP09848 1927 aa13.96□□□□□ -0.18
APOC1-206ENST00000590334 PEX10O60683 326 aa13.95□□□□□ -0.18
APOC1-206ENST00000590334 SLC25A27O95847 323 aa13.95□□□□□ -0.18
APOC1-206ENST00000590334 COPB2P35606 906 aa13.95□□□□□ -0.18
APOC1-206ENST00000590334 STAT3P40763 770 aa13.95□□□□□ -0.18
APOC1-206ENST00000590334 PKN1Q16512 942 aa13.95□□□□□ -0.18
APOC1-206ENST00000590334 PFKFB3Q16875 520 aaPredicted RBP13.95□□□□□ -0.18
APOC1-206ENST00000590334 TKFCQ3LXA3 575 aa13.95□□□□□ -0.18
APOC1-206ENST00000590334 CCDC174Q6PII3 467 aa13.95□□□□□ -0.18
APOC1-206ENST00000590334 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.95□□□□□ -0.18
APOC1-206ENST00000590334 FBXO11Q86XK2 927 aa13.95□□□□□ -0.18
APOC1-206ENST00000590334 HOMER1Q86YM7 354 aa13.95□□□□□ -0.18
APOC1-206ENST00000590334 HSCBQ8IWL3 235 aa13.95□□□□□ -0.18
APOC1-206ENST00000590334 TRIM22Q8IYM9 498 aa13.95□□□□□ -0.18
APOC1-206ENST00000590334 SHCBP1Q8NEM2 672 aa13.95□□□□□ -0.18
APOC1-206ENST00000590334 AGBL1Q96MI9 1066 aa13.95□□□□□ -0.18
APOC1-206ENST00000590334 AMNQ9BXJ7 453 aa13.95□□□□□ -0.18
APOC1-206ENST00000590334 SLC26A6Q9BXS9 759 aa13.95□□□□□ -0.18
APOC1-206ENST00000590334 MOV10L1Q9BXT6 1211 aaKnown RBP13.95□□□□□ -0.18
APOC1-206ENST00000590334 RAVER2Q9HCJ3 691 aaKnown RBP13.95□□□□□ -0.18
APOC1-206ENST00000590334 SEC63Q9UGP8 760 aaKnown RBP13.95□□□□□ -0.18
APOC1-206ENST00000590334 ABCB11O95342 1321 aa13.94□□□□□ -0.18
APOC1-206ENST00000590334 hCG_1984214I3L0E3 225 aa13.94□□□□□ -0.18
APOC1-206ENST00000590334 DEXIO95424 95 aa13.94□□□□□ -0.18
APOC1-206ENST00000590334 SCG2P13521 617 aa13.94□□□□□ -0.18
APOC1-206ENST00000590334 CCNA1P78396 465 aa13.94□□□□□ -0.18
APOC1-206ENST00000590334 SNRNP48Q6IEG0 339 aaKnown RBP13.94□□□□□ -0.18
APOC1-206ENST00000590334 CPXCR1Q8N123 301 aa13.94□□□□□ -0.18
APOC1-206ENST00000590334 ZNF713Q8N859 430 aaPredicted RBP13.94□□□□□ -0.18
APOC1-206ENST00000590334 MAF1Q9H063 256 aa13.94□□□□□ -0.18
APOC1-206ENST00000590334 MROH8Q9H579 483 aa13.94□□□□□ -0.18
APOC1-206ENST00000590334 CCPG1Q9ULG6 757 aa13.94□□□□□ -0.18
APOC1-206ENST00000590334 RIPK3Q9Y572 518 aa13.94□□□□□ -0.18
APOC1-206ENST00000590334 CASP8AP2Q9UKL3 1982 aa13.94□□□□□ -0.18
APOC1-206ENST00000590334 hCG_1642624A0A1W2PR95 340 aa13.93□□□□□ -0.18
APOC1-206ENST00000590334 PTPDC1A2A3K4 754 aa13.93□□□□□ -0.18
APOC1-206ENST00000590334 GPR25O00155 361 aa13.93□□□□□ -0.18
APOC1-206ENST00000590334 FDPSP14324 419 aaKnown RBP13.93□□□□□ -0.18
APOC1-206ENST00000590334 HMGN5P82970 282 aaKnown RBP13.93□□□□□ -0.18
APOC1-206ENST00000590334 AKAP17AQ02040 695 aaKnown RBP13.93□□□□□ -0.18
APOC1-206ENST00000590334 PLS1Q14651 629 aa13.93□□□□□ -0.18
APOC1-206ENST00000590334 FAM177A1Q8N128 213 aaPredicted RBP13.93□□□□□ -0.18
APOC1-206ENST00000590334 CHST13Q8NET6 341 aa13.93□□□□□ -0.18
APOC1-206ENST00000590334 INTS4Q96HW7 963 aaKnown RBP13.93□□□□□ -0.18
APOC1-206ENST00000590334 TSHZ2Q9NRE2 1034 aa13.93□□□□□ -0.18
APOC1-206ENST00000590334 BARHL2Q9NY43 387 aa13.93□□□□□ -0.18
APOC1-206ENST00000590334 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.93□□□□□ -0.18
APOC1-206ENST00000590334 PCDHA1Q9Y5I3 950 aa13.93□□□□□ -0.18
APOC1-206ENST00000590334 DOCK3Q8IZD9 2030 aa13.92□□□□□ -0.18
APOC1-206ENST00000590334 STXBP3O00186 592 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms