RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 MAMDC4Q6UXC1 1216 aa7.49□□□□□ -1.21
VPS25-204ENST00000589577 ASCL5Q7RTU5 278 aa7.49□□□□□ -1.21
VPS25-204ENST00000589577 BMP8AQ7Z5Y6 402 aa7.49□□□□□ -1.21
VPS25-204ENST00000589577 TMCO2Q7Z6W1 182 aaPredicted RBP7.49□□□□□ -1.21
VPS25-204ENST00000589577 DEFB128Q7Z7B8 93 aa7.49□□□□□ -1.21
VPS25-204ENST00000589577 PHOSPHO2Q8TCD6 241 aa7.49□□□□□ -1.21
VPS25-204ENST00000589577 KATNBL1Q9H079 304 aa7.49□□□□□ -1.21
VPS25-204ENST00000589577 ADAMTS5Q9UNA0 930 aa7.49□□□□□ -1.21
VPS25-204ENST00000589577 MYO7AQ13402 2215 aa7.49□□□□□ -1.21
VPS25-204ENST00000589577 NLRC5Q86WI3 1866 aa7.49□□□□□ -1.21
VPS25-204ENST00000589577 ACACBO00763 2458 aa7.49□□□□□ -1.21
VPS25-204ENST00000589577 MED19A0JLT2 244 aaPredicted RBP7.48□□□□□ -1.21
VPS25-204ENST00000589577 FLOT1O75955 427 aa7.48□□□□□ -1.21
VPS25-204ENST00000589577 SLC25A27O95847 323 aa7.48□□□□□ -1.21
VPS25-204ENST00000589577 HLA-DOAP06340 250 aa7.48□□□□□ -1.21
VPS25-204ENST00000589577 ARID4AP29374 1257 aaPredicted RBP7.48□□□□□ -1.21
VPS25-204ENST00000589577 IL15P40933 162 aaPredicted RBP7.48□□□□□ -1.21
VPS25-204ENST00000589577 MCAMP43121 646 aa7.48□□□□□ -1.21
VPS25-204ENST00000589577 DYNLL1P63167 89 aaKnown RBP7.48□□□□□ -1.21
VPS25-204ENST00000589577 EVX2Q03828 476 aa7.48□□□□□ -1.21
VPS25-204ENST00000589577 KCTD2Q14681 263 aa7.48□□□□□ -1.21
VPS25-204ENST00000589577 COL19A1Q14993 1142 aa7.48□□□□□ -1.21
VPS25-204ENST00000589577 CERKLQ49MI3 558 aaPredicted RBP7.48□□□□□ -1.21
VPS25-204ENST00000589577 PPP4R3CPQ6ZMV5 832 aa7.48□□□□□ -1.21
VPS25-204ENST00000589577 RIOX2Q8IUF8 465 aa7.48□□□□□ -1.21
VPS25-204ENST00000589577 CLEC10AQ8IUN9 316 aa7.48□□□□□ -1.21
VPS25-204ENST00000589577 ADHFE1Q8IWW8 467 aa7.48□□□□□ -1.21
VPS25-204ENST00000589577 MSL3Q8N5Y2 521 aaKnown RBP7.48□□□□□ -1.21
VPS25-204ENST00000589577 REPS2Q8NFH8 660 aa7.48□□□□□ -1.21
VPS25-204ENST00000589577 EHD4Q9H223 541 aa7.48□□□□□ -1.21
VPS25-204ENST00000589577 PRKAG3Q9UGI9 489 aa7.48□□□□□ -1.21
VPS25-204ENST00000589577 SERPINB13Q9UIV8 391 aa7.48□□□□□ -1.21
VPS25-204ENST00000589577 ZNF214Q9UL59 606 aaPredicted RBP7.48□□□□□ -1.21
VPS25-204ENST00000589577 MTUS1Q9ULD2 1270 aa7.48□□□□□ -1.21
VPS25-204ENST00000589577 LCTP09848 1927 aa7.48□□□□□ -1.21
VPS25-204ENST00000589577 SCN10AQ9Y5Y9 1956 aa7.48□□□□□ -1.21
VPS25-204ENST00000589577 USP24Q9UPU5 2620 aa7.47□□□□□ -1.21
VPS25-204ENST00000589577 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.47□□□□□ -1.21
VPS25-204ENST00000589577 SOWAHBA6NEL2 793 aa7.47□□□□□ -1.21
VPS25-204ENST00000589577 PROB1E7EW31 1015 aa7.47□□□□□ -1.21
VPS25-204ENST00000589577 CYP2C9P11712 490 aa7.47□□□□□ -1.21
VPS25-204ENST00000589577 PLCG2P16885 1265 aa7.47□□□□□ -1.21
VPS25-204ENST00000589577 VCPP55072 806 aaKnown RBP7.47□□□□□ -1.21
VPS25-204ENST00000589577 PSMC6P62333 389 aa7.47□□□□□ -1.21
VPS25-204ENST00000589577 ACVR2BQ13705 512 aa7.47□□□□□ -1.21
VPS25-204ENST00000589577 MVPQ14764 893 aaKnown RBP7.47□□□□□ -1.21
VPS25-204ENST00000589577 PUS10Q3MIT2 529 aaKnown RBP7.47□□□□□ -1.21
VPS25-204ENST00000589577 NAA16Q6N069 864 aaPredicted RBP7.47□□□□□ -1.21
VPS25-204ENST00000589577 SIAH1Q8IUQ4 282 aa7.47□□□□□ -1.21
VPS25-204ENST00000589577 SPICE1Q8N0Z3 855 aa7.47□□□□□ -1.21
VPS25-204ENST00000589577 EDAQ92838 391 aa7.47□□□□□ -1.21
VPS25-204ENST00000589577 ALDH8A1Q9H2A2 487 aaPredicted RBP7.47□□□□□ -1.21
VPS25-204ENST00000589577 TRMT13Q9NUP7 481 aaKnown RBP7.47□□□□□ -1.21
VPS25-204ENST00000589577 FBXO28Q9NVF7 368 aa7.47□□□□□ -1.21
VPS25-204ENST00000589577 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.47□□□□□ -1.21
VPS25-204ENST00000589577 MAP1BP46821 2468 aaKnown RBP7.46□□□□□ -1.21
VPS25-204ENST00000589577 CHD8Q9HCK8 2581 aa7.46□□□□□ -1.21
VPS25-204ENST00000589577 LINC01553A4QN01 128 aa7.46□□□□□ -1.22
VPS25-204ENST00000589577 PRR23AA6NEV1 266 aa7.46□□□□□ -1.22
VPS25-204ENST00000589577 TMEM221A6NGB7 291 aa7.46□□□□□ -1.22
VPS25-204ENST00000589577 M0R296 226 aa7.46□□□□□ -1.22
VPS25-204ENST00000589577 BAG3O95817 575 aa7.46□□□□□ -1.22
VPS25-204ENST00000589577 ID4P47928 161 aa7.46□□□□□ -1.22
VPS25-204ENST00000589577 PLCD1P51178 756 aa7.46□□□□□ -1.22
VPS25-204ENST00000589577 ERVK-21P61565 698 aa7.46□□□□□ -1.22
VPS25-204ENST00000589577 GABPAQ06546 454 aa7.46□□□□□ -1.22
VPS25-204ENST00000589577 TFCP2Q12800 502 aa7.46□□□□□ -1.22
VPS25-204ENST00000589577 ATF7IPQ6VMQ6 1270 aa7.46□□□□□ -1.22
VPS25-204ENST00000589577 TRIM67Q6ZTA4 783 aa7.46□□□□□ -1.22
VPS25-204ENST00000589577 RNF135Q8IUD6 432 aa7.46□□□□□ -1.22
VPS25-204ENST00000589577 PBXIP1Q96AQ6 731 aa7.46□□□□□ -1.22
VPS25-204ENST00000589577 PRRX2Q99811 253 aa7.46□□□□□ -1.22
VPS25-204ENST00000589577 NOL10Q9BSC4 688 aaKnown RBP7.46□□□□□ -1.22
VPS25-204ENST00000589577 SPC25Q9HBM1 224 aa7.46□□□□□ -1.22
VPS25-204ENST00000589577 COPRSQ9NQ92 184 aa7.46□□□□□ -1.22
VPS25-204ENST00000589577 LRP2BPQ9P2M1 347 aa7.46□□□□□ -1.22
VPS25-204ENST00000589577 GNEQ9Y223 722 aaKnown RBP7.46□□□□□ -1.22
VPS25-204ENST00000589577 PKD1L2Q7Z442 2459 aa7.46□□□□□ -1.22
VPS25-204ENST00000589577 MICAL3Q7RTP6 2002 aa7.45□□□□□ -1.22
VPS25-204ENST00000589577 GREB1LQ9C091 1923 aaPredicted RBP7.45□□□□□ -1.22
VPS25-204ENST00000589577 KIF28PB7ZC32 967 aa7.45□□□□□ -1.22
VPS25-204ENST00000589577 VWA5AO00534 786 aa7.45□□□□□ -1.22
VPS25-204ENST00000589577 CABYRO75952 493 aa7.45□□□□□ -1.22
VPS25-204ENST00000589577 ACTN1P12814 892 aa7.45□□□□□ -1.22
VPS25-204ENST00000589577 LTBRP36941 435 aa7.45□□□□□ -1.22
VPS25-204ENST00000589577 STAT3P40763 770 aa7.45□□□□□ -1.22
VPS25-204ENST00000589577 WDR5P61964 334 aaKnown RBP7.45□□□□□ -1.22
VPS25-204ENST00000589577 DEFB103AP81534 67 aa7.45□□□□□ -1.22
VPS25-204ENST00000589577 TCTN1Q2MV58 587 aa7.45□□□□□ -1.22
VPS25-204ENST00000589577 ZNF467Q7Z7K2 595 aaPredicted RBP7.45□□□□□ -1.22
VPS25-204ENST00000589577 FBXL6Q8N531 539 aa7.45□□□□□ -1.22
VPS25-204ENST00000589577 PABPC5Q96DU9 382 aaKnown RBP7.45□□□□□ -1.22
VPS25-204ENST00000589577 TGS1Q96RS0 853 aaKnown RBP7.45□□□□□ -1.22
VPS25-204ENST00000589577 FSD1Q9BTV5 496 aa7.45□□□□□ -1.22
VPS25-204ENST00000589577 UPF3BQ9BZI7 483 aaKnown RBP7.45□□□□□ -1.22
VPS25-204ENST00000589577 ABHD16BQ9H3Z7 469 aa7.45□□□□□ -1.22
VPS25-204ENST00000589577 CABP5Q9NP86 173 aa7.45□□□□□ -1.22
VPS25-204ENST00000589577 RIPK3Q9Y572 518 aa7.45□□□□□ -1.22
VPS25-204ENST00000589577 ATRXP46100 2492 aa7.45□□□□□ -1.22
VPS25-204ENST00000589577 RALGAPA2Q2PPJ7 1873 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms