RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 PLA2G12BQ9BX93 195 aa10.3□□□□□ -0.76
DNMT1-219ENST00000589349 A6NHS1 94 aa10.29□□□□□ -0.76
DNMT1-219ENST00000589349 CSF1RP07333 972 aa10.29□□□□□ -0.76
DNMT1-219ENST00000589349 VIL1P09327 827 aaKnown RBP10.29□□□□□ -0.76
DNMT1-219ENST00000589349 ECE1P42892 770 aa10.29□□□□□ -0.76
DNMT1-219ENST00000589349 FOXO4P98177 505 aa10.29□□□□□ -0.76
DNMT1-219ENST00000589349 TTLL5Q6EMB2 1281 aa10.29□□□□□ -0.76
DNMT1-219ENST00000589349 C8orf86Q6ZUL3 223 aa10.29□□□□□ -0.76
DNMT1-219ENST00000589349 VPS37DQ86XT2 251 aa10.29□□□□□ -0.76
DNMT1-219ENST00000589349 JMYQ8N9B5 988 aa10.29□□□□□ -0.76
DNMT1-219ENST00000589349 PMEPA1Q969W9 287 aa10.29□□□□□ -0.76
DNMT1-219ENST00000589349 TRIM11Q96F44 468 aa10.29□□□□□ -0.76
DNMT1-219ENST00000589349 MXD3Q9BW11 206 aa10.29□□□□□ -0.76
DNMT1-219ENST00000589349 PLVAPQ9BX97 442 aa10.29□□□□□ -0.76
DNMT1-219ENST00000589349 COA1Q9GZY4 146 aa10.29□□□□□ -0.76
DNMT1-219ENST00000589349 SMG9Q9H0W8 520 aaKnown RBP10.29□□□□□ -0.76
DNMT1-219ENST00000589349 PTPRCP08575 1304 aa10.29□□□□□ -0.76
DNMT1-219ENST00000589349 CNTNAP1P78357 1384 aa10.28□□□□□ -0.76
DNMT1-219ENST00000589349 RTL9Q8NET4 1388 aa10.28□□□□□ -0.76
DNMT1-219ENST00000589349 ADM5C9JUS6 153 aa10.28□□□□□ -0.76
DNMT1-219ENST00000589349 F8W031 263 aaPredicted RBP10.28□□□□□ -0.76
DNMT1-219ENST00000589349 J3QW42 95 aa10.28□□□□□ -0.76
DNMT1-219ENST00000589349 SNAP23O00161 211 aa10.28□□□□□ -0.76
DNMT1-219ENST00000589349 FRAT2O75474 233 aaPredicted RBP10.28□□□□□ -0.76
DNMT1-219ENST00000589349 NID1P14543 1247 aa10.28□□□□□ -0.76
DNMT1-219ENST00000589349 CASP7P55210 303 aa10.28□□□□□ -0.76
DNMT1-219ENST00000589349 HNRNPUQ00839 825 aaKnown RBP eCLIP10.28□□□□□ -0.76
DNMT1-219ENST00000589349 EPHA10Q5JZY3 1008 aa10.28□□□□□ -0.76
DNMT1-219ENST00000589349 CYP4F22Q6NT55 531 aa10.28□□□□□ -0.76
DNMT1-219ENST00000589349 AGBL3Q8NEM8 1001 aa10.28□□□□□ -0.76
DNMT1-219ENST00000589349 SNX29Q8TEQ0 813 aa10.28□□□□□ -0.76
DNMT1-219ENST00000589349 PLD4Q96BZ4 506 aa10.28□□□□□ -0.76
DNMT1-219ENST00000589349 SUCLG2Q96I99 432 aa10.28□□□□□ -0.76
DNMT1-219ENST00000589349 CAPNS2Q96L46 248 aa10.28□□□□□ -0.76
DNMT1-219ENST00000589349 CITED4Q96RK1 184 aa10.28□□□□□ -0.76
DNMT1-219ENST00000589349 SUV39H2Q9H5I1 410 aa10.28□□□□□ -0.76
DNMT1-219ENST00000589349 GGA3Q9NZ52 723 aa10.28□□□□□ -0.76
DNMT1-219ENST00000589349 HDAC9Q9UKV0 1011 aa10.28□□□□□ -0.76
DNMT1-219ENST00000589349 NOB1Q9ULX3 412 aaKnown RBP10.28□□□□□ -0.76
DNMT1-219ENST00000589349 JAG2Q9Y219 1238 aa10.28□□□□□ -0.76
DNMT1-219ENST00000589349 IVNS1ABPQ9Y6Y0 642 aa10.28□□□□□ -0.76
DNMT1-219ENST00000589349 ZNF521Q96K83 1311 aa10.28□□□□□ -0.76
DNMT1-219ENST00000589349 WDR33Q9C0J8 1336 aaKnown RBP10.28□□□□□ -0.76
DNMT1-219ENST00000589349 COL4A1P02462 1669 aa10.28□□□□□ -0.76
DNMT1-219ENST00000589349 NBPF7P0C2Y1 421 aaPredicted RBP10.27□□□□□ -0.77
DNMT1-219ENST00000589349 CES1P23141 567 aa10.27□□□□□ -0.77
DNMT1-219ENST00000589349 KLRK1P26718 216 aa10.27□□□□□ -0.77
DNMT1-219ENST00000589349 AFF1P51825 1210 aaKnown RBP10.27□□□□□ -0.77
DNMT1-219ENST00000589349 RBM5P52756 815 aaKnown RBP eCLIP10.27□□□□□ -0.779e-13■■■■■ 45.4
DNMT1-219ENST00000589349 COL9A3Q14050 684 aaPredicted RBP10.27□□□□□ -0.77
DNMT1-219ENST00000589349 ANGEL2Q5VTE6 544 aaKnown RBP10.27□□□□□ -0.77
DNMT1-219ENST00000589349 DLK2Q6UY11 383 aa10.27□□□□□ -0.77
DNMT1-219ENST00000589349 ZNF804AQ7Z570 1209 aa10.27□□□□□ -0.77
DNMT1-219ENST00000589349 TXNRD3Q86VQ6 643 aa10.27□□□□□ -0.77
DNMT1-219ENST00000589349 KIAA0825Q8IV33 1275 aa10.27□□□□□ -0.77
DNMT1-219ENST00000589349 C2orf69Q8N8R5 385 aa10.27□□□□□ -0.77
DNMT1-219ENST00000589349 FRAT1Q92837 279 aaPredicted RBP10.27□□□□□ -0.77
DNMT1-219ENST00000589349 MYOZ2Q9NPC6 264 aa10.27□□□□□ -0.77
DNMT1-219ENST00000589349 BIN2Q9UBW5 565 aaPredicted RBP10.27□□□□□ -0.77
DNMT1-219ENST00000589349 SCAF8Q9UPN6 1271 aaKnown RBP10.27□□□□□ -0.77
DNMT1-219ENST00000589349 MED23Q9ULK4 1368 aa10.26□□□□□ -0.77
DNMT1-219ENST00000589349 DUOX1Q9NRD9 1551 aa10.26□□□□□ -0.77
DNMT1-219ENST00000589349 PHACTR2O75167 634 aa10.26□□□□□ -0.77
DNMT1-219ENST00000589349 TNFRSF21O75509 655 aa10.26□□□□□ -0.77
DNMT1-219ENST00000589349 KIF4AO95239 1232 aa10.26□□□□□ -0.77
DNMT1-219ENST00000589349 HUNKP57058 714 aa10.26□□□□□ -0.77
DNMT1-219ENST00000589349 ALDH1L2Q3SY69 923 aa10.26□□□□□ -0.77
DNMT1-219ENST00000589349 PRRT3Q5FWE3 981 aa10.26□□□□□ -0.77
DNMT1-219ENST00000589349 METTL24Q5JXM2 366 aa10.26□□□□□ -0.77
DNMT1-219ENST00000589349 CST9Q5W186 159 aa10.26□□□□□ -0.77
DNMT1-219ENST00000589349 NCAPG2Q86XI2 1143 aa10.26□□□□□ -0.77
DNMT1-219ENST00000589349 BICC1Q9H694 974 aaKnown RBP10.26□□□□□ -0.77
DNMT1-219ENST00000589349 LTBP1Q14766 1721 aa10.26□□□□□ -0.77
DNMT1-219ENST00000589349 ASTN2O75129 1339 aaPredicted RBP10.26□□□□□ -0.77
DNMT1-219ENST00000589349 RASSF10A6NK89 507 aa10.25□□□□□ -0.77
DNMT1-219ENST00000589349 CYP2E1P05181 493 aaPredicted RBP10.25□□□□□ -0.77
DNMT1-219ENST00000589349 UBTFL1P0CB47 393 aaPredicted RBP10.25□□□□□ -0.77
DNMT1-219ENST00000589349 COL8A1P27658 744 aa10.25□□□□□ -0.77
DNMT1-219ENST00000589349 MAP2K1Q02750 393 aaPredicted RBP10.25□□□□□ -0.77
DNMT1-219ENST00000589349 COL13A1Q5TAT6 717 aaPredicted RBP10.25□□□□□ -0.77
DNMT1-219ENST00000589349 STRIP1Q5VSL9 837 aa10.25□□□□□ -0.77
DNMT1-219ENST00000589349 C1orf127Q8N9H9 656 aa10.25□□□□□ -0.77
DNMT1-219ENST00000589349 API5Q9BZZ5 524 aaKnown RBP10.25□□□□□ -0.77
DNMT1-219ENST00000589349 CD209Q9NNX6 404 aa10.25□□□□□ -0.77
DNMT1-219ENST00000589349 CNTN3Q9P232 1028 aa10.25□□□□□ -0.77
DNMT1-219ENST00000589349 SPEF2Q9C093 1822 aa10.25□□□□□ -0.77
DNMT1-219ENST00000589349 LRRC37AA6NMS7 1700 aa10.24□□□□□ -0.77
DNMT1-219ENST00000589349 AOC2O75106 756 aa10.24□□□□□ -0.77
DNMT1-219ENST00000589349 SASH1O94885 1247 aa10.24□□□□□ -0.77
DNMT1-219ENST00000589349 NEFLP07196 543 aa10.24□□□□□ -0.77
DNMT1-219ENST00000589349 SPATA31C1P0DKV0 1188 aa10.24□□□□□ -0.77
DNMT1-219ENST00000589349 CTCFP49711 727 aaPredicted RBP10.24□□□□□ -0.77
DNMT1-219ENST00000589349 CHAF1AQ13111 956 aaPredicted RBP10.24□□□□□ -0.77
DNMT1-219ENST00000589349 PRKG1Q13976 671 aa10.24□□□□□ -0.77
DNMT1-219ENST00000589349 DLGAP5Q15398 846 aa10.24□□□□□ -0.77
DNMT1-219ENST00000589349 PRAMEF18Q5VWM3 479 aa10.24□□□□□ -0.77
DNMT1-219ENST00000589349 CACTIN-AS1Q8N1I8 211 aa10.24□□□□□ -0.77
DNMT1-219ENST00000589349 KCTD17Q8N5Z5 321 aa10.24□□□□□ -0.77
DNMT1-219ENST00000589349 KLHDC4Q8TBB5 520 aa10.24□□□□□ -0.77
DNMT1-219ENST00000589349 PUS3Q9BZE2 481 aaKnown RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms