RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 DDNO94850 711 aaPredicted RBP13.8□□□□□ -0.2
CCBE1-203ENST00000589116 DEKP35659 375 aaKnown RBP13.8□□□□□ -0.2
CCBE1-203ENST00000589116 FAM160A1Q05DH4 1040 aa13.8□□□□□ -0.2
CCBE1-203ENST00000589116 EARS2Q5JPH6 523 aaKnown RBP13.8□□□□□ -0.2
CCBE1-203ENST00000589116 FSIP1Q8NA03 581 aa13.8□□□□□ -0.2
CCBE1-203ENST00000589116 ZNF341Q9BYN7 854 aa13.8□□□□□ -0.2
CCBE1-203ENST00000589116 VCPKMTQ9H867 229 aa13.8□□□□□ -0.2
CCBE1-203ENST00000589116 PCDHB6Q9Y5E3 794 aa13.8□□□□□ -0.2
CCBE1-203ENST00000589116 FAM205CA6NFA0 338 aa13.79□□□□□ -0.2
CCBE1-203ENST00000589116 SMCO2A6NFE2 343 aa13.79□□□□□ -0.2
CCBE1-203ENST00000589116 NR1I2O75469 434 aa13.79□□□□□ -0.2
CCBE1-203ENST00000589116 CMA1P23946 247 aa13.79□□□□□ -0.2
CCBE1-203ENST00000589116 ECE1P42892 770 aa13.79□□□□□ -0.2
CCBE1-203ENST00000589116 DEFB115Q30KQ5 88 aa13.79□□□□□ -0.2
CCBE1-203ENST00000589116 TTC38Q5R3I4 469 aa13.79□□□□□ -0.2
CCBE1-203ENST00000589116 PIK3AP1Q6ZUJ8 805 aa13.79□□□□□ -0.2
CCBE1-203ENST00000589116 KRT25Q7Z3Z0 450 aa13.79□□□□□ -0.2
CCBE1-203ENST00000589116 KRI1Q8N9T8 703 aaKnown RBP13.79□□□□□ -0.2
CCBE1-203ENST00000589116 GLT8D2Q9H1C3 349 aa13.79□□□□□ -0.2
CCBE1-203ENST00000589116 CLSTN2Q9H4D0 955 aa13.79□□□□□ -0.2
CCBE1-203ENST00000589116 IQCA1LA6NCM1 817 aa13.79□□□□□ -0.2
CCBE1-203ENST00000589116 USP17L10C9JJH3 530 aa13.79□□□□□ -0.2
CCBE1-203ENST00000589116 PLA2G6O60733 806 aa13.79□□□□□ -0.2
CCBE1-203ENST00000589116 PTPREP23469 700 aa13.79□□□□□ -0.2
CCBE1-203ENST00000589116 MARCKSP29966 332 aaPredicted RBP13.79□□□□□ -0.2
CCBE1-203ENST00000589116 SLC16A2P36021 539 aa13.79□□□□□ -0.2
CCBE1-203ENST00000589116 HIRAP54198 1017 aaPredicted RBP13.79□□□□□ -0.2
CCBE1-203ENST00000589116 NBPF12Q5TAG4 269 aaPredicted RBP13.79□□□□□ -0.2
CCBE1-203ENST00000589116 SYDE2Q5VT97 1194 aa13.79□□□□□ -0.2
CCBE1-203ENST00000589116 ENGASEQ8NFI3 743 aa13.79□□□□□ -0.2
CCBE1-203ENST00000589116 ACER1Q8TDN7 264 aa13.79□□□□□ -0.2
CCBE1-203ENST00000589116 L3MBTL3Q96JM7 780 aaPredicted RBP13.79□□□□□ -0.2
CCBE1-203ENST00000589116 GOLPH3LQ9H4A5 285 aa13.79□□□□□ -0.2
CCBE1-203ENST00000589116 ZNF112Q9UJU3 913 aa13.79□□□□□ -0.2
CCBE1-203ENST00000589116 PCDHA6Q9UN73 950 aa13.79□□□□□ -0.2
CCBE1-203ENST00000589116 SCAF8Q9UPN6 1271 aaKnown RBP13.79□□□□□ -0.2
CCBE1-203ENST00000589116 PCDHA8Q9Y5H6 950 aa13.79□□□□□ -0.2
CCBE1-203ENST00000589116 FAM237AA0A1B0GTK4 181 aa13.78□□□□□ -0.2
CCBE1-203ENST00000589116 TMEM232C9JQI7 657 aa13.78□□□□□ -0.2
CCBE1-203ENST00000589116 CTAGE5O15320 804 aa13.78□□□□□ -0.2
CCBE1-203ENST00000589116 KINO60870 393 aaKnown RBP13.78□□□□□ -0.2
CCBE1-203ENST00000589116 MRE11P49959 708 aa13.78□□□□□ -0.2
CCBE1-203ENST00000589116 ADCY7P51828 1080 aa13.78□□□□□ -0.2
CCBE1-203ENST00000589116 STAT2P52630 851 aa13.78□□□□□ -0.2
CCBE1-203ENST00000589116 TRAF1Q13077 416 aa13.78□□□□□ -0.2
CCBE1-203ENST00000589116 CDC37Q16543 378 aaPredicted RBP13.78□□□□□ -0.2
CCBE1-203ENST00000589116 MAP3K11Q16584 847 aa13.78□□□□□ -0.2
CCBE1-203ENST00000589116 QRICH1Q2TAL8 776 aa13.78□□□□□ -0.2
CCBE1-203ENST00000589116 RBM43Q6ZSC3 357 aaKnown RBP13.78□□□□□ -0.2
CCBE1-203ENST00000589116 GAS2L3Q86XJ1 694 aa13.78□□□□□ -0.2
CCBE1-203ENST00000589116 REXO1Q8N1G1 1221 aaKnown RBP13.78□□□□□ -0.2
CCBE1-203ENST00000589116 ZNF579Q8NAF0 562 aaKnown RBP13.78□□□□□ -0.2
CCBE1-203ENST00000589116 TNMDQ9H2S6 317 aa13.78□□□□□ -0.2
CCBE1-203ENST00000589116 FBXO2Q9UK22 296 aaPredicted RBP13.78□□□□□ -0.2
CCBE1-203ENST00000589116 RASSF10A6NK89 507 aa13.77□□□□□ -0.21
CCBE1-203ENST00000589116 IKQ13123 557 aaPredicted RBP13.77□□□□□ -0.21
CCBE1-203ENST00000589116 SNW1Q13573 536 aaKnown RBP13.77□□□□□ -0.21
CCBE1-203ENST00000589116 SUPT20HL1Q3ZLR7 823 aa13.77□□□□□ -0.21
CCBE1-203ENST00000589116 TEX2Q8IWB9 1127 aa13.77□□□□□ -0.21
CCBE1-203ENST00000589116 FMR1NBQ8N0W7 255 aaPredicted RBP13.77□□□□□ -0.21
CCBE1-203ENST00000589116 FERMT2Q96AC1 680 aa13.77□□□□□ -0.21
CCBE1-203ENST00000589116 COA7Q96BR5 231 aa13.77□□□□□ -0.21
CCBE1-203ENST00000589116 RIC8AQ9NPQ8 531 aa13.77□□□□□ -0.21
CCBE1-203ENST00000589116 SRPRBQ9Y5M8 271 aaKnown RBP13.77□□□□□ -0.21
CCBE1-203ENST00000589116 PPP1R11O60927 126 aaPredicted RBP13.76□□□□□ -0.21
CCBE1-203ENST00000589116 ATP2B1P20020 1258 aa13.76□□□□□ -0.21
CCBE1-203ENST00000589116 ATP2C1P98194 919 aaPredicted RBP13.76□□□□□ -0.21
CCBE1-203ENST00000589116 ORC2Q13416 577 aaPredicted RBP13.76□□□□□ -0.21
CCBE1-203ENST00000589116 NONOQ15233 471 aaKnown RBP eCLIP13.76□□□□□ -0.21
CCBE1-203ENST00000589116 EAPPQ56P03 285 aaPredicted RBP13.76□□□□□ -0.21
CCBE1-203ENST00000589116 NOM1Q5C9Z4 860 aaKnown RBP13.76□□□□□ -0.21
CCBE1-203ENST00000589116 RESP18Q5W5W9 173 aa13.76□□□□□ -0.21
CCBE1-203ENST00000589116 FAM160B2Q86V87 743 aa13.76□□□□□ -0.21
CCBE1-203ENST00000589116 SCYL3Q8IZE3 742 aa13.76□□□□□ -0.21
CCBE1-203ENST00000589116 RASGRP4Q8TDF6 673 aa13.76□□□□□ -0.21
CCBE1-203ENST00000589116 CHURC1Q8WUH1 139 aa13.76□□□□□ -0.21
CCBE1-203ENST00000589116 LPAR1Q92633 364 aa13.76□□□□□ -0.21
CCBE1-203ENST00000589116 CUL5Q93034 780 aa13.76□□□□□ -0.21
CCBE1-203ENST00000589116 NUP88Q99567 741 aaPredicted RBP13.76□□□□□ -0.21
CCBE1-203ENST00000589116 FEZ1Q99689 392 aa13.76□□□□□ -0.21
CCBE1-203ENST00000589116 AMNQ9BXJ7 453 aa13.76□□□□□ -0.21
CCBE1-203ENST00000589116 KIAA1683Q9H0B3 1180 aa13.76□□□□□ -0.21
CCBE1-203ENST00000589116 TSPY26PQ9H489 355 aa13.76□□□□□ -0.21
CCBE1-203ENST00000589116 ABT1Q9ULW3 272 aaKnown RBP13.76□□□□□ -0.21
CCBE1-203ENST00000589116 CLEC11AQ9Y240 323 aa13.76□□□□□ -0.21
CCBE1-203ENST00000589116 HPSEQ9Y251 543 aa13.76□□□□□ -0.21
CCBE1-203ENST00000589116 SCN4AP35499 1836 aa13.76□□□□□ -0.21
CCBE1-203ENST00000589116 A0A1B0GVL5 298 aa13.75□□□□□ -0.21
CCBE1-203ENST00000589116 ADAMTS3O15072 1205 aa13.75□□□□□ -0.21
CCBE1-203ENST00000589116 PFKFB1P16118 471 aa13.75□□□□□ -0.21
CCBE1-203ENST00000589116 MRPL12P52815 198 aaKnown RBP13.75□□□□□ -0.21
CCBE1-203ENST00000589116 SHC4Q6S5L8 630 aa13.75□□□□□ -0.21
CCBE1-203ENST00000589116 PAXIP1Q6ZW49 1069 aaPredicted RBP13.75□□□□□ -0.21
CCBE1-203ENST00000589116 SPICE1Q8N0Z3 855 aa13.75□□□□□ -0.21
CCBE1-203ENST00000589116 GRPEL1Q9HAV7 217 aa13.75□□□□□ -0.21
CCBE1-203ENST00000589116 AS3MTQ9HBK9 375 aa13.75□□□□□ -0.21
CCBE1-203ENST00000589116 FEM1BQ9UK73 627 aa13.75□□□□□ -0.21
CCBE1-203ENST00000589116 PRR12Q9ULL5 1215 aa13.75□□□□□ -0.21
CCBE1-203ENST00000589116 POLR2AP24928 1970 aaKnown RBP13.75□□□□□ -0.21
CCBE1-203ENST00000589116 SSC5DA1L4H1 1573 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms