RNA–Protein interactions for RNA: ENST00000589078.1

APOC1-204, Transcript of apolipoprotein C1, humanhuman

TSL 2

Gene APOC1, Length 213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-204ENST00000589078 KCTD1Q719H9 257 aa11.32□□□□□ -0.6
APOC1-204ENST00000589078 ENAHQ8N8S7 591 aaPredicted RBP11.32□□□□□ -0.6
APOC1-204ENST00000589078 PNMA1Q8ND90 353 aa11.32□□□□□ -0.6
APOC1-204ENST00000589078 NUDT12Q9BQG2 462 aa11.32□□□□□ -0.6
APOC1-204ENST00000589078 TEX13BQ9BXU2 312 aa11.32□□□□□ -0.6
APOC1-204ENST00000589078 BTBD7Q9P203 1132 aa11.32□□□□□ -0.6
APOC1-204ENST00000589078 ADAMTS5Q9UNA0 930 aa11.32□□□□□ -0.6
APOC1-204ENST00000589078 MYH8P13535 1937 aa11.32□□□□□ -0.6
APOC1-204ENST00000589078 STRNO43815 780 aa11.31□□□□□ -0.6
APOC1-204ENST00000589078 PDHBP11177 359 aa11.31□□□□□ -0.6
APOC1-204ENST00000589078 STAT3P40763 770 aa11.31□□□□□ -0.6
APOC1-204ENST00000589078 RGS2P41220 211 aa11.31□□□□□ -0.6
APOC1-204ENST00000589078 OAZ1P54368 228 aa11.31□□□□□ -0.6
APOC1-204ENST00000589078 TMEM132BQ14DG7 1078 aa11.31□□□□□ -0.6
APOC1-204ENST00000589078 WTAPQ15007 396 aa11.31□□□□□ -0.6
APOC1-204ENST00000589078 LRRC26Q2I0M4 334 aa11.31□□□□□ -0.6
APOC1-204ENST00000589078 Q3C1V9 767 aa11.31□□□□□ -0.6
APOC1-204ENST00000589078 TMEM67Q5HYA8 995 aa11.31□□□□□ -0.6
APOC1-204ENST00000589078 GPR142Q7Z601 462 aa11.31□□□□□ -0.6
APOC1-204ENST00000589078 NCAPG2Q86XI2 1143 aa11.31□□□□□ -0.6
APOC1-204ENST00000589078 TRMT44Q8IYL2 757 aaKnown RBP11.31□□□□□ -0.6
APOC1-204ENST00000589078 MTA3Q9BTC8 594 aa11.31□□□□□ -0.6
APOC1-204ENST00000589078 MOV10L1Q9BXT6 1211 aaKnown RBP11.31□□□□□ -0.6
APOC1-204ENST00000589078 PORCNQ9H237 461 aa11.31□□□□□ -0.6
APOC1-204ENST00000589078 SLC38A10Q9HBR0 1119 aa11.31□□□□□ -0.6
APOC1-204ENST00000589078 SLC5A4Q9NY91 659 aa11.31□□□□□ -0.6
APOC1-204ENST00000589078 PNMA2Q9UL42 364 aa11.31□□□□□ -0.6
APOC1-204ENST00000589078 GREB1LQ9C091 1923 aaPredicted RBP11.31□□□□□ -0.6
APOC1-204ENST00000589078 SLC15A5A6NIM6 579 aa11.3□□□□□ -0.6
APOC1-204ENST00000589078 PEX10O60683 326 aa11.3□□□□□ -0.6
APOC1-204ENST00000589078 HMGB1P09429 215 aaKnown RBP11.3□□□□□ -0.6
APOC1-204ENST00000589078 ERCC3P19447 782 aa11.3□□□□□ -0.6
APOC1-204ENST00000589078 CYP2B6P20813 491 aa11.3□□□□□ -0.6
APOC1-204ENST00000589078 ZNF543Q08ER8 600 aa11.3□□□□□ -0.6
APOC1-204ENST00000589078 ASPRV1Q53RT3 343 aa11.3□□□□□ -0.6
APOC1-204ENST00000589078 SYDE2Q5VT97 1194 aa11.3□□□□□ -0.6
APOC1-204ENST00000589078 STOX1Q6ZVD7 989 aa11.3□□□□□ -0.6
APOC1-204ENST00000589078 CYB5R4Q7L1T6 521 aa11.3□□□□□ -0.6
APOC1-204ENST00000589078 CATIPQ7Z7H3 387 aa11.3□□□□□ -0.6
APOC1-204ENST00000589078 RIOX2Q8IUF8 465 aa11.3□□□□□ -0.6
APOC1-204ENST00000589078 MB21D2Q8IYB1 491 aaPredicted RBP11.3□□□□□ -0.6
APOC1-204ENST00000589078 ABRAQ8N0Z2 381 aa11.3□□□□□ -0.6
APOC1-204ENST00000589078 TMTC2Q8N394 836 aa11.3□□□□□ -0.6
APOC1-204ENST00000589078 CHMP4CQ96CF2 233 aa11.3□□□□□ -0.6
APOC1-204ENST00000589078 TMEM87BQ96K49 555 aa11.3□□□□□ -0.6
APOC1-204ENST00000589078 PRDM6Q9NQX0 595 aa11.3□□□□□ -0.6
APOC1-204ENST00000589078 FRMPD2Q68DX3 1309 aaPredicted RBP11.3□□□□□ -0.6
APOC1-204ENST00000589078 ATP2A1O14983 1001 aa11.29□□□□□ -0.6
APOC1-204ENST00000589078 PRC1O43663 620 aa11.29□□□□□ -0.6
APOC1-204ENST00000589078 PARP1P09874 1014 aaKnown RBP11.29□□□□□ -0.6
APOC1-204ENST00000589078 SNHG28P0DPA3 235 aa11.29□□□□□ -0.6
APOC1-204ENST00000589078 FCER1AP12319 257 aa11.29□□□□□ -0.6
APOC1-204ENST00000589078 XRCC5P13010 732 aaKnown RBP11.29□□□□□ -0.6
APOC1-204ENST00000589078 PTPREP23469 700 aa11.29□□□□□ -0.6
APOC1-204ENST00000589078 SEC23AQ15436 765 aa11.29□□□□□ -0.6
APOC1-204ENST00000589078 TSGA10IPQ3SY00 556 aa11.29□□□□□ -0.6
APOC1-204ENST00000589078 ZNF697Q5TEC3 545 aa11.29□□□□□ -0.6
APOC1-204ENST00000589078 SNRNP48Q6IEG0 339 aaKnown RBP11.29□□□□□ -0.6
APOC1-204ENST00000589078 POTEEQ6S8J3 1075 aa11.29□□□□□ -0.6
APOC1-204ENST00000589078 BTNL9Q6UXG8 535 aa11.29□□□□□ -0.6
APOC1-204ENST00000589078 NFXL1Q6ZNB6 911 aa11.29□□□□□ -0.6
APOC1-204ENST00000589078 CPXCR1Q8N123 301 aa11.29□□□□□ -0.6
APOC1-204ENST00000589078 REPS2Q8NFH8 660 aa11.29□□□□□ -0.6
APOC1-204ENST00000589078 NEK1Q96PY6 1258 aa11.29□□□□□ -0.6
APOC1-204ENST00000589078 APBA2Q99767 749 aa11.29□□□□□ -0.6
APOC1-204ENST00000589078 GPCPD1Q9NPB8 672 aa11.29□□□□□ -0.6
APOC1-204ENST00000589078 FBXO40Q9UH90 709 aa11.29□□□□□ -0.6
APOC1-204ENST00000589078 ZNF214Q9UL59 606 aaPredicted RBP11.29□□□□□ -0.6
APOC1-204ENST00000589078 PRR12Q9ULL5 1215 aa11.29□□□□□ -0.6
APOC1-204ENST00000589078 TAF6LQ9Y6J9 622 aa11.29□□□□□ -0.6
APOC1-204ENST00000589078 LAMA4Q16363 1823 aa11.28□□□□□ -0.6
APOC1-204ENST00000589078 PSMA5P28066 241 aa11.28□□□□□ -0.6
APOC1-204ENST00000589078 CCND3P30281 292 aaPredicted RBP11.28□□□□□ -0.6
APOC1-204ENST00000589078 HSPA4P34932 840 aa11.28□□□□□ -0.6
APOC1-204ENST00000589078 SLC4A3P48751 1232 aa11.28□□□□□ -0.6
APOC1-204ENST00000589078 FGD1P98174 961 aa11.28□□□□□ -0.6
APOC1-204ENST00000589078 CACNB2Q08289 660 aaPredicted RBP11.28□□□□□ -0.6
APOC1-204ENST00000589078 MAP2K5Q13163 448 aa11.28□□□□□ -0.6
APOC1-204ENST00000589078 GRB14Q14449 540 aa11.28□□□□□ -0.6
APOC1-204ENST00000589078 KCTD2Q14681 263 aa11.28□□□□□ -0.6
APOC1-204ENST00000589078 TKFCQ3LXA3 575 aa11.28□□□□□ -0.6
APOC1-204ENST00000589078 MORN1Q5T089 497 aa11.28□□□□□ -0.6
APOC1-204ENST00000589078 LHX8Q68G74 356 aa11.28□□□□□ -0.6
APOC1-204ENST00000589078 CHST3Q7LGC8 479 aa11.28□□□□□ -0.6
APOC1-204ENST00000589078 DPP9Q86TI2 863 aa11.28□□□□□ -0.6
APOC1-204ENST00000589078 CHST13Q8NET6 341 aa11.28□□□□□ -0.6
APOC1-204ENST00000589078 MAFAQ8NHW3 353 aaPredicted RBP11.28□□□□□ -0.6
APOC1-204ENST00000589078 MMP19Q99542 508 aa11.28□□□□□ -0.6
APOC1-204ENST00000589078 RAVER2Q9HCJ3 691 aaKnown RBP11.28□□□□□ -0.6
APOC1-204ENST00000589078 WDR19Q8NEZ3 1342 aa11.28□□□□□ -0.6
APOC1-204ENST00000589078 CCDC69A6NI79 296 aa11.27□□□□□ -0.61
APOC1-204ENST00000589078 DHX16O60231 1041 aaKnown RBP11.27□□□□□ -0.61
APOC1-204ENST00000589078 ADORA2AP29274 412 aa11.27□□□□□ -0.61
APOC1-204ENST00000589078 KIF5BP33176 963 aa11.27□□□□□ -0.61
APOC1-204ENST00000589078 SLC16A2P36021 539 aa11.27□□□□□ -0.61
APOC1-204ENST00000589078 TTBK2Q6IQ55 1244 aa11.27□□□□□ -0.61
APOC1-204ENST00000589078 CCDC174Q6PII3 467 aa11.27□□□□□ -0.61
APOC1-204ENST00000589078 SYNE3Q6ZMZ3 975 aa11.27□□□□□ -0.61
APOC1-204ENST00000589078 DHX32Q7L7V1 743 aaKnown RBP11.27□□□□□ -0.61
APOC1-204ENST00000589078 IGDCC4Q8TDY8 1250 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms