RNA–Protein interactions for RNA: ENST00000588961.1

KDM4B-207, Transcript of lysine demethylase 4B, humanhuman

TSL 4

Gene KDM4B, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-207ENST00000588961 PROCA1Q8NCQ7 364 aaPredicted RBP10.03□□□□□ -0.8
KDM4B-207ENST00000588961 NEDD1Q8NHV4 660 aa10.03□□□□□ -0.8
KDM4B-207ENST00000588961 ESR2Q92731 530 aa10.03□□□□□ -0.8
KDM4B-207ENST00000588961 CEP95Q96GE4 821 aa10.03□□□□□ -0.8
KDM4B-207ENST00000588961 MAP3K14Q99558 947 aa10.03□□□□□ -0.8
KDM4B-207ENST00000588961 PANK2Q9BZ23 570 aa10.03□□□□□ -0.8
KDM4B-207ENST00000588961 KIAA1683Q9H0B3 1180 aa10.03□□□□□ -0.8
KDM4B-207ENST00000588961 ZFYVE28Q9HCC9 887 aa10.03□□□□□ -0.8
KDM4B-207ENST00000588961 ARHGEF10LQ9HCE6 1279 aa10.03□□□□□ -0.8
KDM4B-207ENST00000588961 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.03□□□□□ -0.8
KDM4B-207ENST00000588961 ZSWIM5Q9P217 1185 aa10.03□□□□□ -0.8
KDM4B-207ENST00000588961 ORC3Q9UBD5 711 aaPredicted RBP10.03□□□□□ -0.8
KDM4B-207ENST00000588961 USP25Q9UHP3 1055 aa10.03□□□□□ -0.8
KDM4B-207ENST00000588961 NOL7Q9UMY1 257 aaKnown RBP10.03□□□□□ -0.8
KDM4B-207ENST00000588961 AGTPBP1Q9UPW5 1226 aa10.03□□□□□ -0.8
KDM4B-207ENST00000588961 SLC12A7Q9Y666 1083 aa10.03□□□□□ -0.8
KDM4B-207ENST00000588961 NEDD4P46934 1319 aa10.03□□□□□ -0.8
KDM4B-207ENST00000588961 PTPRFP10586 1907 aa10.02□□□□□ -0.81
KDM4B-207ENST00000588961 CCDC69A6NI79 296 aa10.02□□□□□ -0.81
KDM4B-207ENST00000588961 B4E1Z4 1266 aa10.02□□□□□ -0.81
KDM4B-207ENST00000588961 GPR25O00155 361 aa10.02□□□□□ -0.81
KDM4B-207ENST00000588961 PPP6R2O75170 966 aa10.02□□□□□ -0.81
KDM4B-207ENST00000588961 U2AF2P26368 475 aaKnown RBP eCLIP10.02□□□□□ -0.81
KDM4B-207ENST00000588961 USP14P54578 494 aa10.02□□□□□ -0.81
KDM4B-207ENST00000588961 CCT2P78371 535 aaKnown RBP10.02□□□□□ -0.81
KDM4B-207ENST00000588961 COL9A3Q14050 684 aaPredicted RBP10.02□□□□□ -0.81
KDM4B-207ENST00000588961 NTRK3Q16288 839 aa10.02□□□□□ -0.81
KDM4B-207ENST00000588961 ZSCAN30Q86W11 494 aa10.02□□□□□ -0.81
KDM4B-207ENST00000588961 SPICE1Q8N0Z3 855 aa10.02□□□□□ -0.81
KDM4B-207ENST00000588961 TIGD1Q96MW7 591 aa10.02□□□□□ -0.81
KDM4B-207ENST00000588961 ZKSCAN3Q9BRR0 538 aa10.02□□□□□ -0.81
KDM4B-207ENST00000588961 CLSTN2Q9H4D0 955 aa10.02□□□□□ -0.81
KDM4B-207ENST00000588961 LY9Q9HBG7 655 aa10.02□□□□□ -0.81
KDM4B-207ENST00000588961 GDPD2Q9HCC8 539 aa10.02□□□□□ -0.81
KDM4B-207ENST00000588961 IL17RBQ9NRM6 502 aa10.02□□□□□ -0.81
KDM4B-207ENST00000588961 MTMR4Q9NYA4 1195 aa10.02□□□□□ -0.81
KDM4B-207ENST00000588961 NYAP2Q9P242 653 aa10.02□□□□□ -0.81
KDM4B-207ENST00000588961 RBM27Q9P2N5 1060 aaKnown RBP10.02□□□□□ -0.81
KDM4B-207ENST00000588961 CCDC39Q9UFE4 941 aa10.02□□□□□ -0.81
KDM4B-207ENST00000588961 CPA4Q9UI42 421 aa10.02□□□□□ -0.81
KDM4B-207ENST00000588961 TMX2Q9Y320 296 aa10.02□□□□□ -0.81
KDM4B-207ENST00000588961 GOLGA8BA8MQT2 603 aa10.01□□□□□ -0.81
KDM4B-207ENST00000588961 IFIT3O14879 490 aaKnown RBP10.01□□□□□ -0.81
KDM4B-207ENST00000588961 TLR2O60603 784 aa10.01□□□□□ -0.81
KDM4B-207ENST00000588961 KDM4AO75164 1064 aa10.01□□□□□ -0.81
KDM4B-207ENST00000588961 XBP1P17861 261 aa10.01□□□□□ -0.81
KDM4B-207ENST00000588961 VCAM1P19320 739 aa10.01□□□□□ -0.81
KDM4B-207ENST00000588961 OSBPP22059 807 aa10.01□□□□□ -0.81
KDM4B-207ENST00000588961 SSRP1Q08945 709 aaKnown RBP10.01□□□□□ -0.81
KDM4B-207ENST00000588961 TRIM29Q14134 588 aa10.01□□□□□ -0.81
KDM4B-207ENST00000588961 DHX8Q14562 1220 aaKnown RBP10.01□□□□□ -0.81
KDM4B-207ENST00000588961 TMEM67Q5HYA8 995 aa10.01□□□□□ -0.81
KDM4B-207ENST00000588961 IQCA1Q86XH1 822 aa10.01□□□□□ -0.81
KDM4B-207ENST00000588961 TRIM22Q8IYM9 498 aa10.01□□□□□ -0.81
KDM4B-207ENST00000588961 LRRC47Q8N1G4 583 aaKnown RBP10.01□□□□□ -0.81
KDM4B-207ENST00000588961 FAM200AQ8TCP9 573 aa10.01□□□□□ -0.81
KDM4B-207ENST00000588961 ZNF296Q8WUU4 475 aaPredicted RBP10.01□□□□□ -0.81
KDM4B-207ENST00000588961 DDX11Q96FC9 970 aa10.01□□□□□ -0.81
KDM4B-207ENST00000588961 C12orf42Q96LP6 360 aa10.01□□□□□ -0.81
KDM4B-207ENST00000588961 PARK7Q99497 189 aaKnown RBP10.01□□□□□ -0.81
KDM4B-207ENST00000588961 P2RX7Q99572 595 aaKnown RBP10.01□□□□□ -0.81
KDM4B-207ENST00000588961 CFHR5Q9BXR6 569 aa10.01□□□□□ -0.81
KDM4B-207ENST00000588961 LRRC2Q9BYS8 371 aa10.01□□□□□ -0.81
KDM4B-207ENST00000588961 ASCC2Q9H1I8 757 aaPredicted RBP10.01□□□□□ -0.81
KDM4B-207ENST00000588961 TNMDQ9H2S6 317 aa10.01□□□□□ -0.81
KDM4B-207ENST00000588961 RPAP3Q9H6T3 665 aaPredicted RBP10.01□□□□□ -0.81
KDM4B-207ENST00000588961 VCPKMTQ9H867 229 aa10.01□□□□□ -0.81
KDM4B-207ENST00000588961 ZCCHC17Q9NP64 241 aaKnown RBP10.01□□□□□ -0.81
KDM4B-207ENST00000588961 RBM28Q9NW13 759 aaKnown RBP10.01□□□□□ -0.81
KDM4B-207ENST00000588961 GREB1LQ9C091 1923 aaPredicted RBP10□□□□□ -0.81
KDM4B-207ENST00000588961 FAM237AA0A1B0GTK4 181 aa10□□□□□ -0.81
KDM4B-207ENST00000588961 USP17L15C9J2P7 530 aa10□□□□□ -0.81
KDM4B-207ENST00000588961 USP17L13C9JLJ4 530 aa10□□□□□ -0.81
KDM4B-207ENST00000588961 USP17L11C9JVI0 530 aa10□□□□□ -0.81
KDM4B-207ENST00000588961 USP17L18D6R9N7 530 aa10□□□□□ -0.81
KDM4B-207ENST00000588961 USP17L22D6RA61 530 aa10□□□□□ -0.81
KDM4B-207ENST00000588961 USP17L17D6RBQ6 530 aa10□□□□□ -0.81
KDM4B-207ENST00000588961 USP17L19D6RCP7 530 aa10□□□□□ -0.81
KDM4B-207ENST00000588961 USP17L20D6RJB6 530 aa10□□□□□ -0.81
KDM4B-207ENST00000588961 F5H6K3 240 aa10□□□□□ -0.81
KDM4B-207ENST00000588961 PEX10O60683 326 aa10□□□□□ -0.81
KDM4B-207ENST00000588961 DEXIO95424 95 aa10□□□□□ -0.81
KDM4B-207ENST00000588961 FMNL1O95466 1100 aaPredicted RBP10□□□□□ -0.81
KDM4B-207ENST00000588961 TTLL1O95922 423 aa10□□□□□ -0.81
KDM4B-207ENST00000588961 TERF1P54274 439 aa10□□□□□ -0.81
KDM4B-207ENST00000588961 IRX3P78415 501 aaPredicted RBP10□□□□□ -0.81
KDM4B-207ENST00000588961 FAM160A1Q05DH4 1040 aa10□□□□□ -0.81
KDM4B-207ENST00000588961 KLRC3Q07444 240 aa10□□□□□ -0.81
KDM4B-207ENST00000588961 USP17L24Q0WX57 530 aa10□□□□□ -0.81
KDM4B-207ENST00000588961 PABPC4Q13310 644 aaKnown RBP eCLIP10□□□□□ -0.81
KDM4B-207ENST00000588961 WTAPQ15007 396 aa10□□□□□ -0.81
KDM4B-207ENST00000588961 SAFBQ15424 915 aaKnown RBP eCLIP10□□□□□ -0.811e-6■■□□□ 11.4
KDM4B-207ENST00000588961 CATSPERGQ6ZRH7 1159 aa10□□□□□ -0.81
KDM4B-207ENST00000588961 CCDC73Q6ZRK6 1079 aa10□□□□□ -0.81
KDM4B-207ENST00000588961 FERMT3Q86UX7 667 aa10□□□□□ -0.81
KDM4B-207ENST00000588961 LINC00301Q8NCQ3 95 aa10□□□□□ -0.81
KDM4B-207ENST00000588961 SMCR8Q8TEV9 937 aaPredicted RBP10□□□□□ -0.81
KDM4B-207ENST00000588961 SLC39A7Q92504 469 aa10□□□□□ -0.81
KDM4B-207ENST00000588961 ANKS1AQ92625 1134 aa10□□□□□ -0.81
KDM4B-207ENST00000588961 PGBD1Q96JS3 809 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms