RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 FAM217BQ9NTX9 383 aaPredicted RBP22.06■■□□□ 1.12
CLPTM1-209ENST00000588855 ZNF536O15090 1300 aa22.06■■□□□ 1.12
CLPTM1-209ENST00000588855 PLXNB2O15031 1838 aa22.06■■□□□ 1.12
CLPTM1-209ENST00000588855 GNAQP50148 359 aa22.06■■□□□ 1.12
CLPTM1-209ENST00000588855 CDC37Q16543 378 aaPredicted RBP22.06■■□□□ 1.12
CLPTM1-209ENST00000588855 SNRNP48Q6IEG0 339 aaKnown RBP22.06■■□□□ 1.12
CLPTM1-209ENST00000588855 ZNF274Q96GC6 653 aaPredicted RBP22.06■■□□□ 1.12
CLPTM1-209ENST00000588855 RIOX1Q9H6W3 641 aa22.06■■□□□ 1.12
CLPTM1-209ENST00000588855 RBM28Q9NW13 759 aaKnown RBP22.06■■□□□ 1.12
CLPTM1-209ENST00000588855 DOCK3Q8IZD9 2030 aa22.05■■□□□ 1.12
CLPTM1-209ENST00000588855 ATP2A1O14983 1001 aa22.05■■□□□ 1.12
CLPTM1-209ENST00000588855 TAL1P17542 331 aaPredicted RBP22.05■■□□□ 1.12
CLPTM1-209ENST00000588855 STAT3P40763 770 aa22.05■■□□□ 1.12
CLPTM1-209ENST00000588855 OAZ1P54368 228 aa22.05■■□□□ 1.12
CLPTM1-209ENST00000588855 CCT2P78371 535 aaKnown RBP22.05■■□□□ 1.12
CLPTM1-209ENST00000588855 CCNA1P78396 465 aa22.05■■□□□ 1.12
CLPTM1-209ENST00000588855 STK3Q13188 491 aa22.05■■□□□ 1.12
CLPTM1-209ENST00000588855 AGBL1Q96MI9 1066 aa22.05■■□□□ 1.12
CLPTM1-209ENST00000588855 SPZ1Q9BXG8 430 aa22.05■■□□□ 1.12
CLPTM1-209ENST00000588855 TEX13BQ9BXU2 312 aa22.05■■□□□ 1.12
CLPTM1-209ENST00000588855 EFCC1Q9HA90 598 aa22.05■■□□□ 1.12
CLPTM1-209ENST00000588855 NCOA5Q9HCD5 579 aaKnown RBP22.05■■□□□ 1.12
CLPTM1-209ENST00000588855 LARGE1O95461 756 aa22.04■■□□□ 1.12
CLPTM1-209ENST00000588855 ADD1P35611 737 aaKnown RBP22.04■■□□□ 1.12
CLPTM1-209ENST00000588855 CCDC82Q8N4S0 544 aa22.04■■□□□ 1.12
CLPTM1-209ENST00000588855 MTMR8Q96EF0 704 aa22.04■■□□□ 1.12
CLPTM1-209ENST00000588855 ERO1AQ96HE7 468 aa22.04■■□□□ 1.12
CLPTM1-209ENST00000588855 LZTS2Q9BRK4 669 aa22.04■■□□□ 1.12
CLPTM1-209ENST00000588855 RIPK3Q9Y572 518 aa22.04■■□□□ 1.12
CLPTM1-209ENST00000588855 PSMC4P43686 418 aa22.03■■□□□ 1.12
CLPTM1-209ENST00000588855 SLC4A3P48751 1232 aa22.03■■□□□ 1.12
CLPTM1-209ENST00000588855 QRICH1Q2TAL8 776 aa22.03■■□□□ 1.12
CLPTM1-209ENST00000588855 HOMER1Q86YM7 354 aa22.03■■□□□ 1.12
CLPTM1-209ENST00000588855 RIOX2Q8IUF8 465 aa22.03■■□□□ 1.12
CLPTM1-209ENST00000588855 PIBF1Q8WXW3 757 aa22.03■■□□□ 1.12
CLPTM1-209ENST00000588855 PIGSQ96S52 555 aa22.03■■□□□ 1.12
CLPTM1-209ENST00000588855 CNTNAP5Q8WYK1 1306 aa22.03■■□□□ 1.12
CLPTM1-209ENST00000588855 ICAM1P05362 532 aa22.02■■□□□ 1.12
CLPTM1-209ENST00000588855 ERCC3P19447 782 aa22.02■■□□□ 1.12
CLPTM1-209ENST00000588855 SMARCA1P28370 1054 aa22.02■■□□□ 1.12
CLPTM1-209ENST00000588855 KIF22Q14807 665 aa22.02■■□□□ 1.12
CLPTM1-209ENST00000588855 PPP2R5BQ15173 497 aa22.02■■□□□ 1.12
CLPTM1-209ENST00000588855 NCAPG2Q86XI2 1143 aa22.02■■□□□ 1.12
CLPTM1-209ENST00000588855 TRIM47Q96LD4 638 aa22.02■■□□□ 1.12
CLPTM1-209ENST00000588855 CCPG1Q9ULG6 757 aa22.02■■□□□ 1.12
CLPTM1-209ENST00000588855 ST18O60284 1047 aa22.01■■□□□ 1.11
CLPTM1-209ENST00000588855 MAPK4P31152 587 aa22.01■■□□□ 1.11
CLPTM1-209ENST00000588855 FUT2Q10981 343 aa22.01■■□□□ 1.11
CLPTM1-209ENST00000588855 ME3Q16798 604 aa22.01■■□□□ 1.11
CLPTM1-209ENST00000588855 WDR78Q5VTH9 848 aa22.01■■□□□ 1.11
CLPTM1-209ENST00000588855 CCAR1Q8IX12 1150 aaKnown RBP22.01■■□□□ 1.11
CLPTM1-209ENST00000588855 SHCBP1Q8NEM2 672 aa22.01■■□□□ 1.11
CLPTM1-209ENST00000588855 HTTP42858 3142 aa22.01■■□□□ 1.11
CLPTM1-209ENST00000588855 CCDC196A0A1B0GTZ2 297 aa22.01■■□□□ 1.11
CLPTM1-209ENST00000588855 TNPO2O14787 897 aaKnown RBP22.01■■□□□ 1.11
CLPTM1-209ENST00000588855 ZBTB5O15062 677 aa22.01■■□□□ 1.11
CLPTM1-209ENST00000588855 CD2BP2O95400 341 aaKnown RBP22.01■■□□□ 1.11
CLPTM1-209ENST00000588855 FMNL1O95466 1100 aaPredicted RBP22.01■■□□□ 1.11
CLPTM1-209ENST00000588855 SLC25A27O95847 323 aa22.01■■□□□ 1.11
CLPTM1-209ENST00000588855 ALAS1P13196 640 aa22.01■■□□□ 1.11
CLPTM1-209ENST00000588855 FCGRTP55899 365 aa22.01■■□□□ 1.11
CLPTM1-209ENST00000588855 SCRN1Q12765 414 aa22.01■■□□□ 1.11
CLPTM1-209ENST00000588855 SLKQ9H2G2 1235 aaPredicted RBP22.01■■□□□ 1.11
CLPTM1-209ENST00000588855 HOMER2Q9NSB8 354 aa22.01■■□□□ 1.11
CLPTM1-209ENST00000588855 LIMCH1Q9UPQ0 1083 aa22.01■■□□□ 1.11
CLPTM1-209ENST00000588855 RBBP6Q7Z6E9 1792 aaKnown RBP22■■□□□ 1.11
CLPTM1-209ENST00000588855 hCG_1642624A0A1W2PR95 340 aa22■■□□□ 1.11
CLPTM1-209ENST00000588855 PFKFB2O60825 505 aa22■■□□□ 1.11
CLPTM1-209ENST00000588855 PPP1R11O60927 126 aaPredicted RBP22■■□□□ 1.11
CLPTM1-209ENST00000588855 USH1GQ495M9 461 aa22■■□□□ 1.11
CLPTM1-209ENST00000588855 GPR142Q7Z601 462 aa22■■□□□ 1.11
CLPTM1-209ENST00000588855 CWC22Q9HCG8 908 aaKnown RBP22■■□□□ 1.11
CLPTM1-209ENST00000588855 ZNFX1Q9P2E3 1918 aaKnown RBP22■■□□□ 1.11
CLPTM1-209ENST00000588855 ZNF236Q9UL36 1845 aa21.99■■□□□ 1.11
CLPTM1-209ENST00000588855 COPB2P35606 906 aa21.99■■□□□ 1.11
CLPTM1-209ENST00000588855 NTRK3Q16288 839 aa21.99■■□□□ 1.11
CLPTM1-209ENST00000588855 FBXO11Q86XK2 927 aa21.99■■□□□ 1.11
CLPTM1-209ENST00000588855 NECAB1Q8N987 351 aa21.99■■□□□ 1.11
CLPTM1-209ENST00000588855 RRP36Q96EU6 259 aaKnown RBP21.99■■□□□ 1.11
CLPTM1-209ENST00000588855 MROH8Q9H579 483 aa21.99■■□□□ 1.11
CLPTM1-209ENST00000588855 RNF146Q9NTX7 359 aa21.99■■□□□ 1.11
CLPTM1-209ENST00000588855 PNMA6FA0A0J9YX94 578 aa21.98■■□□□ 1.11
CLPTM1-209ENST00000588855 PLEKHH3Q7Z736 793 aa21.98■■□□□ 1.11
CLPTM1-209ENST00000588855 GTF3C6Q969F1 213 aa21.98■■□□□ 1.11
CLPTM1-209ENST00000588855 PRDM10Q9NQV6 1147 aa21.98■■□□□ 1.11
CLPTM1-209ENST00000588855 SEC63Q9UGP8 760 aaKnown RBP21.98■■□□□ 1.11
CLPTM1-209ENST00000588855 PPFIA3O75145 1194 aa21.97■■□□□ 1.11
CLPTM1-209ENST00000588855 TKFCQ3LXA3 575 aa21.97■■□□□ 1.11
CLPTM1-209ENST00000588855 MUM1L1Q5H9M0 696 aa21.97■■□□□ 1.11
CLPTM1-209ENST00000588855 IL27Q8NEV9 243 aa21.97■■□□□ 1.11
CLPTM1-209ENST00000588855 PHKBQ93100 1093 aa21.97■■□□□ 1.11
CLPTM1-209ENST00000588855 TRERF1Q96PN7 1200 aa21.97■■□□□ 1.11
CLPTM1-209ENST00000588855 AMNQ9BXJ7 453 aa21.97■■□□□ 1.11
CLPTM1-209ENST00000588855 TRIM17Q9Y577 477 aa21.97■■□□□ 1.11
CLPTM1-209ENST00000588855 CPLX1O14810 134 aa21.96■■□□□ 1.11
CLPTM1-209ENST00000588855 IFNAR1P17181 557 aa21.96■■□□□ 1.11
CLPTM1-209ENST00000588855 ST3GAL1Q11201 340 aa21.96■■□□□ 1.11
CLPTM1-209ENST00000588855 OTOP1Q7RTM1 612 aa21.96■■□□□ 1.11
CLPTM1-209ENST00000588855 CHST13Q8NET6 341 aa21.96■■□□□ 1.11
CLPTM1-209ENST00000588855 COA7Q96BR5 231 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms