RNA–Protein interactions for RNA: ENST00000588812.5

CDK3-204, Transcript of cyclin dependent kinase 3, humanhuman

TSL 3

Gene CDK3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-204ENST00000588812 CPLX1O14810 134 aa12.89□□□□□ -0.35
CDK3-204ENST00000588812 ZBTB5O15062 677 aa12.89□□□□□ -0.35
CDK3-204ENST00000588812 CYTH3O43739 400 aa12.89□□□□□ -0.35
CDK3-204ENST00000588812 PFKFB2O60825 505 aa12.89□□□□□ -0.35
CDK3-204ENST00000588812 ICAM1P05362 532 aa12.89□□□□□ -0.35
CDK3-204ENST00000588812 HSPA8P11142 646 aaKnown RBP12.89□□□□□ -0.35
CDK3-204ENST00000588812 CDC27P30260 824 aa12.89□□□□□ -0.35
CDK3-204ENST00000588812 MAPK4P31152 587 aa12.89□□□□□ -0.35
CDK3-204ENST00000588812 ADD1P35611 737 aaKnown RBP12.89□□□□□ -0.35
CDK3-204ENST00000588812 CCT2P78371 535 aaKnown RBP12.89□□□□□ -0.35
CDK3-204ENST00000588812 LACTBP83111 547 aaPredicted RBP12.89□□□□□ -0.35
CDK3-204ENST00000588812 STK3Q13188 491 aa12.89□□□□□ -0.35
CDK3-204ENST00000588812 CDC37Q16543 378 aaPredicted RBP12.89□□□□□ -0.35
CDK3-204ENST00000588812 Q3C1V9 767 aa12.89□□□□□ -0.35
CDK3-204ENST00000588812 SNRNP48Q6IEG0 339 aaKnown RBP12.89□□□□□ -0.35
CDK3-204ENST00000588812 CCDC174Q6PII3 467 aa12.89□□□□□ -0.35
CDK3-204ENST00000588812 CPLX2Q6PUV4 134 aaKnown RBP12.89□□□□□ -0.35
CDK3-204ENST00000588812 NOL8Q76FK4 1167 aaKnown RBP12.89□□□□□ -0.35
CDK3-204ENST00000588812 NBPF11Q86T75 865 aa12.89□□□□□ -0.35
CDK3-204ENST00000588812 RIOX2Q8IUF8 465 aa12.89□□□□□ -0.35
CDK3-204ENST00000588812 SHCBP1Q8NEM2 672 aa12.89□□□□□ -0.35
CDK3-204ENST00000588812 ZNF296Q8WUU4 475 aaPredicted RBP12.89□□□□□ -0.35
CDK3-204ENST00000588812 MTMR8Q96EF0 704 aa12.89□□□□□ -0.35
CDK3-204ENST00000588812 RRP36Q96EU6 259 aaKnown RBP12.89□□□□□ -0.35
CDK3-204ENST00000588812 ERO1AQ96HE7 468 aa12.89□□□□□ -0.35
CDK3-204ENST00000588812 MOV10L1Q9BXT6 1211 aaKnown RBP12.89□□□□□ -0.35
CDK3-204ENST00000588812 RAVER2Q9HCJ3 691 aaKnown RBP12.89□□□□□ -0.35
CDK3-204ENST00000588812 FAM217BQ9NTX9 383 aaPredicted RBP12.89□□□□□ -0.35
CDK3-204ENST00000588812 PNMA6FA0A0J9YX94 578 aa12.88□□□□□ -0.35
CDK3-204ENST00000588812 PEX10O60683 326 aa12.88□□□□□ -0.35
CDK3-204ENST00000588812 SNAP25P60880 206 aa12.88□□□□□ -0.35
CDK3-204ENST00000588812 FUT2Q10981 343 aa12.88□□□□□ -0.35
CDK3-204ENST00000588812 ME3Q16798 604 aa12.88□□□□□ -0.35
CDK3-204ENST00000588812 SLC35G1Q2M3R5 365 aa12.88□□□□□ -0.35
CDK3-204ENST00000588812 TKFCQ3LXA3 575 aa12.88□□□□□ -0.35
CDK3-204ENST00000588812 FBXO11Q86XK2 927 aa12.88□□□□□ -0.35
CDK3-204ENST00000588812 CMTR1Q8N1G2 835 aaKnown RBP12.88□□□□□ -0.35
CDK3-204ENST00000588812 CCDC82Q8N4S0 544 aa12.88□□□□□ -0.35
CDK3-204ENST00000588812 PIGSQ96S52 555 aa12.88□□□□□ -0.35
CDK3-204ENST00000588812 MROH8Q9H579 483 aa12.88□□□□□ -0.35
CDK3-204ENST00000588812 NCOA5Q9HCD5 579 aaKnown RBP12.88□□□□□ -0.35
CDK3-204ENST00000588812 CWC22Q9HCG8 908 aaKnown RBP12.88□□□□□ -0.35
CDK3-204ENST00000588812 PRDM10Q9NQV6 1147 aa12.88□□□□□ -0.35
CDK3-204ENST00000588812 SH2B1Q9NRF2 756 aaPredicted RBP12.88□□□□□ -0.35
CDK3-204ENST00000588812 SEC63Q9UGP8 760 aaKnown RBP12.88□□□□□ -0.35
CDK3-204ENST00000588812 CCPG1Q9ULG6 757 aa12.88□□□□□ -0.35
CDK3-204ENST00000588812 ZNF536O15090 1300 aa12.88□□□□□ -0.35
CDK3-204ENST00000588812 CDKL5O76039 1030 aa12.87□□□□□ -0.35
CDK3-204ENST00000588812 GNRH1P01148 92 aa12.87□□□□□ -0.35
CDK3-204ENST00000588812 IFNAR1P17181 557 aa12.87□□□□□ -0.35
CDK3-204ENST00000588812 ERCC3P19447 782 aa12.87□□□□□ -0.35
CDK3-204ENST00000588812 PSMC4P43686 418 aa12.87□□□□□ -0.35
CDK3-204ENST00000588812 SLC4A3P48751 1232 aa12.87□□□□□ -0.35
CDK3-204ENST00000588812 LBX1P52954 281 aa12.87□□□□□ -0.35
CDK3-204ENST00000588812 FCGRTP55899 365 aa12.87□□□□□ -0.35
CDK3-204ENST00000588812 NTRK3Q16288 839 aa12.87□□□□□ -0.35
CDK3-204ENST00000588812 QRICH1Q2TAL8 776 aa12.87□□□□□ -0.35
CDK3-204ENST00000588812 NCAPG2Q86XI2 1143 aa12.87□□□□□ -0.35
CDK3-204ENST00000588812 HOMER1Q86YM7 354 aa12.87□□□□□ -0.35
CDK3-204ENST00000588812 CHST13Q8NET6 341 aa12.87□□□□□ -0.35
CDK3-204ENST00000588812 GTF3C6Q969F1 213 aa12.87□□□□□ -0.35
CDK3-204ENST00000588812 AGBL1Q96MI9 1066 aa12.87□□□□□ -0.35
CDK3-204ENST00000588812 AMNQ9BXJ7 453 aa12.87□□□□□ -0.35
CDK3-204ENST00000588812 PORCNQ9H237 461 aa12.87□□□□□ -0.35
CDK3-204ENST00000588812 RBM27Q9P2N5 1060 aaKnown RBP12.87□□□□□ -0.35
CDK3-204ENST00000588812 FBXO40Q9UH90 709 aa12.87□□□□□ -0.35
CDK3-204ENST00000588812 TNPO2O14787 897 aaKnown RBP12.86□□□□□ -0.35
CDK3-204ENST00000588812 STRNO43815 780 aa12.86□□□□□ -0.35
CDK3-204ENST00000588812 FMNL1O95466 1100 aaPredicted RBP12.86□□□□□ -0.35
CDK3-204ENST00000588812 ALAS1P13196 640 aa12.86□□□□□ -0.35
CDK3-204ENST00000588812 AKAP17AQ02040 695 aaKnown RBP12.86□□□□□ -0.35
CDK3-204ENST00000588812 SCRN1Q12765 414 aa12.86□□□□□ -0.35
CDK3-204ENST00000588812 WDR78Q5VTH9 848 aa12.86□□□□□ -0.35
CDK3-204ENST00000588812 PLEKHH3Q7Z736 793 aa12.86□□□□□ -0.35
CDK3-204ENST00000588812 TRIM22Q8IYM9 498 aa12.86□□□□□ -0.35
CDK3-204ENST00000588812 CD99L2Q8TCZ2 262 aa12.86□□□□□ -0.35
CDK3-204ENST00000588812 COA7Q96BR5 231 aa12.86□□□□□ -0.35
CDK3-204ENST00000588812 EFCC1Q9HA90 598 aa12.86□□□□□ -0.35
CDK3-204ENST00000588812 RIPK3Q9Y572 518 aa12.86□□□□□ -0.35
CDK3-204ENST00000588812 IVNS1ABPQ9Y6Y0 642 aa12.86□□□□□ -0.35
CDK3-204ENST00000588812 V9GY48 417 aaPredicted RBP12.86□□□□□ -0.35
CDK3-204ENST00000588812 ABCB11O95342 1321 aa12.86□□□□□ -0.35
CDK3-204ENST00000588812 CNTNAP5Q8WYK1 1306 aa12.86□□□□□ -0.35
CDK3-204ENST00000588812 BAZ2BQ9UIF8 2168 aaKnown RBP12.86□□□□□ -0.35
CDK3-204ENST00000588812 COL11A1P12107 1806 aaPredicted RBP12.85□□□□□ -0.35
CDK3-204ENST00000588812 PRPF3O43395 683 aaKnown RBP12.85□□□□□ -0.35
CDK3-204ENST00000588812 LARGE1O95461 756 aa12.85□□□□□ -0.35
CDK3-204ENST00000588812 FCER1AP12319 257 aa12.85□□□□□ -0.35
CDK3-204ENST00000588812 HOXD10P28358 340 aa12.85□□□□□ -0.35
CDK3-204ENST00000588812 SSRP1Q08945 709 aaKnown RBP12.85□□□□□ -0.35
CDK3-204ENST00000588812 USH1GQ495M9 461 aa12.85□□□□□ -0.35
CDK3-204ENST00000588812 GPR142Q7Z601 462 aa12.85□□□□□ -0.35
CDK3-204ENST00000588812 ABRAQ8N0Z2 381 aa12.85□□□□□ -0.35
CDK3-204ENST00000588812 NECAB1Q8N987 351 aa12.85□□□□□ -0.35
CDK3-204ENST00000588812 PIBF1Q8WXW3 757 aa12.85□□□□□ -0.35
CDK3-204ENST00000588812 TRIM47Q96LD4 638 aa12.85□□□□□ -0.35
CDK3-204ENST00000588812 TRERF1Q96PN7 1200 aa12.85□□□□□ -0.35
CDK3-204ENST00000588812 RNF26Q9BY78 433 aaPredicted RBP12.85□□□□□ -0.35
CDK3-204ENST00000588812 MAF1Q9H063 256 aa12.85□□□□□ -0.35
CDK3-204ENST00000588812 ACAD9Q9H845 621 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms