RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 TYW1BQ6NUM6 668 aa26.1■■□□□ 1.77
ACTN4-210ENST00000588618 VPS54Q9P1Q0 977 aa26.1■■□□□ 1.77
ACTN4-210ENST00000588618 PNMA3Q9UL41 463 aa26.1■■□□□ 1.77
ACTN4-210ENST00000588618 QRICH1Q2TAL8 776 aa26.09■■□□□ 1.77
ACTN4-210ENST00000588618 WWC2Q6AWC2 1192 aa26.09■■□□□ 1.77
ACTN4-210ENST00000588618 CHMP5Q9NZZ3 219 aa26.09■■□□□ 1.77
ACTN4-210ENST00000588618 MYPNQ86TC9 1320 aa26.09■■□□□ 1.77
ACTN4-210ENST00000588618 hCG_1984214I3L0E3 225 aa26.08■■□□□ 1.77
ACTN4-210ENST00000588618 ZBED4O75132 1171 aa26.08■■□□□ 1.77
ACTN4-210ENST00000588618 BRD1O95696 1058 aa26.08■■□□□ 1.77
ACTN4-210ENST00000588618 TRAF1Q13077 416 aa26.08■■□□□ 1.77
ACTN4-210ENST00000588618 ZNF713Q8N859 430 aaPredicted RBP26.08■■□□□ 1.77
ACTN4-210ENST00000588618 FBXO18Q8NFZ0 1043 aa26.08■■□□□ 1.77
ACTN4-210ENST00000588618 CCDC12Q8WUD4 166 aaPredicted RBP26.08■■□□□ 1.77
ACTN4-210ENST00000588618 RANBP17Q9H2T7 1088 aaKnown RBP26.08■■□□□ 1.77
ACTN4-210ENST00000588618 VPS37CA5D8V6 355 aaPredicted RBP26.08■■□□□ 1.76
ACTN4-210ENST00000588618 TAL1P17542 331 aaPredicted RBP26.08■■□□□ 1.76
ACTN4-210ENST00000588618 DSG3P32926 999 aa26.08■■□□□ 1.76
ACTN4-210ENST00000588618 FOXD4L5Q5VV16 416 aaPredicted RBP26.08■■□□□ 1.76
ACTN4-210ENST00000588618 CCDC174Q6PII3 467 aa26.08■■□□□ 1.76
ACTN4-210ENST00000588618 FOXD4L4Q8WXT5 416 aaPredicted RBP26.08■■□□□ 1.76
ACTN4-210ENST00000588618 BRI3BPQ8WY22 251 aa26.08■■□□□ 1.76
ACTN4-210ENST00000588618 AMNQ9BXJ7 453 aa26.08■■□□□ 1.76
ACTN4-210ENST00000588618 DEFB115Q30KQ5 88 aa26.07■■□□□ 1.76
ACTN4-210ENST00000588618 KRT40Q6A162 431 aa26.07■■□□□ 1.76
ACTN4-210ENST00000588618 CCDC148Q8NFR7 591 aa26.07■■□□□ 1.76
ACTN4-210ENST00000588618 ATG4CQ96DT6 458 aa26.07■■□□□ 1.76
ACTN4-210ENST00000588618 KCNJ14Q9UNX9 436 aa26.07■■□□□ 1.76
ACTN4-210ENST00000588618 STXBP3O00186 592 aa26.06■■□□□ 1.76
ACTN4-210ENST00000588618 GPAT2Q6NUI2 795 aa26.06■■□□□ 1.76
ACTN4-210ENST00000588618 FBXO11Q86XK2 927 aa26.06■■□□□ 1.76
ACTN4-210ENST00000588618 ASCC2Q9H1I8 757 aaPredicted RBP26.06■■□□□ 1.76
ACTN4-210ENST00000588618 BARHL2Q9NY43 387 aa26.06■■□□□ 1.76
ACTN4-210ENST00000588618 VWA5AO00534 786 aa26.05■■□□□ 1.76
ACTN4-210ENST00000588618 ADAMTS3O15072 1205 aa26.05■■□□□ 1.76
ACTN4-210ENST00000588618 NAPAP54920 295 aa26.05■■□□□ 1.76
ACTN4-210ENST00000588618 INHBEP58166 350 aa26.05■■□□□ 1.76
ACTN4-210ENST00000588618 NUCB2P80303 420 aa26.05■■□□□ 1.76
ACTN4-210ENST00000588618 ANKRD23Q86SG2 305 aa26.05■■□□□ 1.76
ACTN4-210ENST00000588618 SLC38A10Q9HBR0 1119 aa26.05■■□□□ 1.76
ACTN4-210ENST00000588618 SH3GLB2Q9NR46 395 aa26.05■■□□□ 1.76
ACTN4-210ENST00000588618 PNMA2Q9UL42 364 aa26.05■■□□□ 1.76
ACTN4-210ENST00000588618 SLC45A1Q9Y2W3 748 aa26.05■■□□□ 1.76
ACTN4-210ENST00000588618 PCDHA1Q9Y5I3 950 aa26.05■■□□□ 1.76
ACTN4-210ENST00000588618 A0A0G2JMZ2 1700 aa26.05■■□□□ 1.76
ACTN4-210ENST00000588618 BTBD19C9JJ37 291 aa26.05■■□□□ 1.76
ACTN4-210ENST00000588618 PDHXO00330 501 aa26.05■■□□□ 1.76
ACTN4-210ENST00000588618 SREBF2Q12772 1141 aa26.05■■□□□ 1.76
ACTN4-210ENST00000588618 SAFBQ15424 915 aaKnown RBP eCLIP26.05■■□□□ 1.764e-6■■■■□ 22.6
ACTN4-210ENST00000588618 NPY5RQ15761 445 aa26.05■■□□□ 1.76
ACTN4-210ENST00000588618 USH1GQ495M9 461 aa26.05■■□□□ 1.76
ACTN4-210ENST00000588618 CYP4F22Q6NT55 531 aa26.05■■□□□ 1.76
ACTN4-210ENST00000588618 COA7Q96BR5 231 aa26.05■■□□□ 1.76
ACTN4-210ENST00000588618 RASSF10A6NK89 507 aa26.04■■□□□ 1.76
ACTN4-210ENST00000588618 SPDYE16A6NNV3 312 aaPredicted RBP26.04■■□□□ 1.76
ACTN4-210ENST00000588618 FAM155AB1AL88 458 aaPredicted RBP26.04■■□□□ 1.76
ACTN4-210ENST00000588618 NLRP5P59047 1200 aa26.04■■□□□ 1.76
ACTN4-210ENST00000588618 POTEEQ6S8J3 1075 aa26.04■■□□□ 1.76
ACTN4-210ENST00000588618 CPXCR1Q8N123 301 aa26.04■■□□□ 1.76
ACTN4-210ENST00000588618 BRMS1Q9HCU9 246 aa26.04■■□□□ 1.76
ACTN4-210ENST00000588618 WDR33Q9C0J8 1336 aaKnown RBP26.04■■□□□ 1.76
ACTN4-210ENST00000588618 ZSCAN22P10073 491 aaPredicted RBP26.03■■□□□ 1.76
ACTN4-210ENST00000588618 FERMT3Q86UX7 667 aa26.03■■□□□ 1.76
ACTN4-210ENST00000588618 FAM177A1Q8N128 213 aaPredicted RBP26.03■■□□□ 1.76
ACTN4-210ENST00000588618 MB21D1Q8N884 522 aa26.03■■□□□ 1.76
ACTN4-210ENST00000588618 SMCR8Q8TEV9 937 aaPredicted RBP26.03■■□□□ 1.76
ACTN4-210ENST00000588618 P2RX7Q99572 595 aaKnown RBP26.03■■□□□ 1.76
ACTN4-210ENST00000588618 PHF20Q9BVI0 1012 aa26.03■■□□□ 1.76
ACTN4-210ENST00000588618 ZNF536O15090 1300 aa26.03■■□□□ 1.76
ACTN4-210ENST00000588618 PCNTO95613 3336 aa26.03■■□□□ 1.76
ACTN4-210ENST00000588618 TESPA1A2RU30 521 aaPredicted RBP26.02■■□□□ 1.76
ACTN4-210ENST00000588618 ICAM1P05362 532 aa26.02■■□□□ 1.76
ACTN4-210ENST00000588618 GNL2Q13823 731 aaKnown RBP26.02■■□□□ 1.76
ACTN4-210ENST00000588618 RGS22Q8NE09 1264 aa26.02■■□□□ 1.76
ACTN4-210ENST00000588618 CCPG1Q9ULG6 757 aa26.02■■□□□ 1.76
ACTN4-210ENST00000588618 ADAMTS5Q9UNA0 930 aa26.02■■□□□ 1.76
ACTN4-210ENST00000588618 MYH15Q9Y2K3 1946 aa26.02■■□□□ 1.76
ACTN4-210ENST00000588618 MMP1P03956 469 aa26.02■■□□□ 1.76
ACTN4-210ENST00000588618 CALML3P27482 149 aa26.02■■□□□ 1.76
ACTN4-210ENST00000588618 HERVK_113P62684 666 aa26.02■■□□□ 1.76
ACTN4-210ENST00000588618 NOGQ13253 232 aa26.02■■□□□ 1.76
ACTN4-210ENST00000588618 MCTP1Q6DN14 999 aa26.02■■□□□ 1.76
ACTN4-210ENST00000588618 PPP1R18Q6NYC8 613 aa26.02■■□□□ 1.76
ACTN4-210ENST00000588618 CAPNS2Q96L46 248 aa26.02■■□□□ 1.76
ACTN4-210ENST00000588618 PARK7Q99497 189 aaKnown RBP26.02■■□□□ 1.76
ACTN4-210ENST00000588618 KIF28PB7ZC32 967 aa26.01■■□□□ 1.75
ACTN4-210ENST00000588618 OAZ1P54368 228 aa26.01■■□□□ 1.75
ACTN4-210ENST00000588618 PLS1Q14651 629 aa26.01■■□□□ 1.75
ACTN4-210ENST00000588618 FAM43AQ8N2R8 423 aa26.01■■□□□ 1.75
ACTN4-210ENST00000588618 REPS2Q8NFH8 660 aa26.01■■□□□ 1.75
ACTN4-210ENST00000588618 GTF3C2Q8WUA4 911 aaPredicted RBP26.01■■□□□ 1.75
ACTN4-210ENST00000588618 RAVER2Q9HCJ3 691 aaKnown RBP26.01■■□□□ 1.75
ACTN4-210ENST00000588618 TCHHQ07283 1943 aa26.01■■□□□ 1.75
ACTN4-210ENST00000588618 GNA11P29992 359 aa26■■□□□ 1.75
ACTN4-210ENST00000588618 OXER1Q8TDS5 423 aa26■■□□□ 1.75
ACTN4-210ENST00000588618 C6orf50Q9HD87 102 aa26■■□□□ 1.75
ACTN4-210ENST00000588618 F13A1P00488 732 aa26■■□□□ 1.75
ACTN4-210ENST00000588618 KIF23Q02241 960 aaPredicted RBP26■■□□□ 1.75
ACTN4-210ENST00000588618 RESTQ13127 1097 aa26■■□□□ 1.75
ACTN4-210ENST00000588618 LBX2Q6XYB7 198 aa26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms