RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 DCDC2CA8MYV0 355 aa16.51■□□□□ 0.23
CLPTM1-208ENST00000588274 M0R2C6 588 aa16.51■□□□□ 0.23
CLPTM1-208ENST00000588274 PRDM1O75626 825 aa16.51■□□□□ 0.23
CLPTM1-208ENST00000588274 CD4P01730 458 aa16.51■□□□□ 0.23
CLPTM1-208ENST00000588274 PTGS1P23219 599 aa16.51■□□□□ 0.23
CLPTM1-208ENST00000588274 OAZ1P54368 228 aa16.51■□□□□ 0.23
CLPTM1-208ENST00000588274 CPXCR1Q8N123 301 aa16.51■□□□□ 0.23
CLPTM1-208ENST00000588274 STK11IPQ8N1F8 1099 aa16.51■□□□□ 0.23
CLPTM1-208ENST00000588274 FAM133AQ8N9E0 248 aa16.51■□□□□ 0.23
CLPTM1-208ENST00000588274 TIFAQ96CG3 184 aa16.51■□□□□ 0.23
CLPTM1-208ENST00000588274 PBX4Q9BYU1 374 aa16.51■□□□□ 0.23
CLPTM1-208ENST00000588274 ABHD16BQ9H3Z7 469 aa16.51■□□□□ 0.23
CLPTM1-208ENST00000588274 ZNF576Q9H609 170 aa16.51■□□□□ 0.23
CLPTM1-208ENST00000588274 PRDM6Q9NQX0 595 aa16.51■□□□□ 0.23
CLPTM1-208ENST00000588274 CLIP2Q9UDT6 1046 aa16.51■□□□□ 0.23
CLPTM1-208ENST00000588274 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.5■□□□□ 0.23
CLPTM1-208ENST00000588274 GRXCR1A8MXD5 290 aa16.5■□□□□ 0.23
CLPTM1-208ENST00000588274 FOXP2O15409 715 aa16.5■□□□□ 0.23
CLPTM1-208ENST00000588274 GPAA1O43292 621 aa16.5■□□□□ 0.23
CLPTM1-208ENST00000588274 C6orf222P0C671 652 aaPredicted RBP16.5■□□□□ 0.23
CLPTM1-208ENST00000588274 CSF2RAP15509 400 aa16.5■□□□□ 0.23
CLPTM1-208ENST00000588274 CNTN2Q02246 1040 aa16.5■□□□□ 0.23
CLPTM1-208ENST00000588274 CCDC144CPQ8IYA2 1237 aa16.5■□□□□ 0.23
CLPTM1-208ENST00000588274 LRRC47Q8N1G4 583 aaKnown RBP16.5■□□□□ 0.23
CLPTM1-208ENST00000588274 SLC43A3Q8NBI5 491 aa16.5■□□□□ 0.23
CLPTM1-208ENST00000588274 KIFC2Q96AC6 838 aa16.5■□□□□ 0.23
CLPTM1-208ENST00000588274 VWCEQ96DN2 955 aa16.5■□□□□ 0.23
CLPTM1-208ENST00000588274 DDX11Q96FC9 970 aa16.5■□□□□ 0.23
CLPTM1-208ENST00000588274 GLT1D1Q96MS3 346 aa16.5■□□□□ 0.23
CLPTM1-208ENST00000588274 TRANK1O15050 2925 aa16.49■□□□□ 0.23
CLPTM1-208ENST00000588274 MROH7Q68CQ1 1323 aa16.49■□□□□ 0.23
CLPTM1-208ENST00000588274 A0A0U1RQG5 324 aaPredicted RBP16.49■□□□□ 0.23
CLPTM1-208ENST00000588274 ARVCFO00192 962 aa16.49■□□□□ 0.23
CLPTM1-208ENST00000588274 CHST13Q8NET6 341 aa16.49■□□□□ 0.23
CLPTM1-208ENST00000588274 A1CFQ9NQ94 594 aaKnown RBP16.49■□□□□ 0.23
CLPTM1-208ENST00000588274 FEM1BQ9UK73 627 aa16.49■□□□□ 0.23
CLPTM1-208ENST00000588274 GNEQ9Y223 722 aaKnown RBP16.49■□□□□ 0.23
CLPTM1-208ENST00000588274 DDX49Q9Y6V7 483 aaKnown RBP16.49■□□□□ 0.23
CLPTM1-208ENST00000588274 GRIN2DO15399 1336 aa16.48■□□□□ 0.23
CLPTM1-208ENST00000588274 UMODL1Q5DID0 1318 aa16.48■□□□□ 0.23
CLPTM1-208ENST00000588274 GBF1Q92538 1859 aa16.48■□□□□ 0.23
CLPTM1-208ENST00000588274 SOWAHBA6NEL2 793 aa16.48■□□□□ 0.23
CLPTM1-208ENST00000588274 MINDY4BA8MYZ0 360 aa16.48■□□□□ 0.23
CLPTM1-208ENST00000588274 RASGRP2Q7LDG7 609 aa16.48■□□□□ 0.23
CLPTM1-208ENST00000588274 PCSK9Q8NBP7 692 aaKnown RBP16.48■□□□□ 0.23
CLPTM1-208ENST00000588274 MKNK2Q9HBH9 465 aa16.48■□□□□ 0.23
CLPTM1-208ENST00000588274 CXXC1Q9P0U4 656 aaPredicted RBP16.48■□□□□ 0.23
CLPTM1-208ENST00000588274 FBXO40Q9UH90 709 aa16.48■□□□□ 0.23
CLPTM1-208ENST00000588274 RNF113AO15541 343 aaKnown RBP16.47■□□□□ 0.23
CLPTM1-208ENST00000588274 ZBED4O75132 1171 aa16.47■□□□□ 0.23
CLPTM1-208ENST00000588274 TTLL1O95922 423 aa16.47■□□□□ 0.23
CLPTM1-208ENST00000588274 ACRP10323 421 aa16.47■□□□□ 0.23
CLPTM1-208ENST00000588274 BEX3Q00994 111 aa16.47■□□□□ 0.23
CLPTM1-208ENST00000588274 PPIGQ13427 754 aaKnown RBP eCLIP16.47■□□□□ 0.23
CLPTM1-208ENST00000588274 ADGRE1Q14246 886 aa16.47■□□□□ 0.23
CLPTM1-208ENST00000588274 TJAP1Q5JTD0 557 aa16.47■□□□□ 0.23
CLPTM1-208ENST00000588274 ZNF365Q70YC5 407 aa16.47■□□□□ 0.23
CLPTM1-208ENST00000588274 ANKRD35Q8N283 1001 aa16.47■□□□□ 0.23
CLPTM1-208ENST00000588274 NEDD1Q8NHV4 660 aa16.47■□□□□ 0.23
CLPTM1-208ENST00000588274 GNASQ5JWF2 1037 aa16.46■□□□□ 0.23
CLPTM1-208ENST00000588274 TMEM63BQ5T3F8 832 aa16.46■□□□□ 0.23
CLPTM1-208ENST00000588274 IFNL3Q8IZI9 196 aa16.46■□□□□ 0.23
CLPTM1-208ENST00000588274 GMCL1Q96IK5 515 aa16.46■□□□□ 0.23
CLPTM1-208ENST00000588274 AGBL1Q96MI9 1066 aa16.46■□□□□ 0.23
CLPTM1-208ENST00000588274 SEC62Q99442 399 aaKnown RBP16.46■□□□□ 0.23
CLPTM1-208ENST00000588274 PPP1R12CQ9BZL4 782 aa16.46■□□□□ 0.23
CLPTM1-208ENST00000588274 ACAD9Q9H845 621 aa16.46■□□□□ 0.23
CLPTM1-208ENST00000588274 HOMER2Q9NSB8 354 aa16.46■□□□□ 0.23
CLPTM1-208ENST00000588274 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.46■□□□□ 0.23
CLPTM1-208ENST00000588274 BMP3P12645 472 aa16.45■□□□□ 0.22
CLPTM1-208ENST00000588274 GNAT2P19087 354 aa16.45■□□□□ 0.22
CLPTM1-208ENST00000588274 CYP2C18P33260 490 aa16.45■□□□□ 0.22
CLPTM1-208ENST00000588274 SLC4A3P48751 1232 aa16.45■□□□□ 0.22
CLPTM1-208ENST00000588274 TDO2P48775 406 aa16.45■□□□□ 0.22
CLPTM1-208ENST00000588274 SLFN13Q68D06 897 aa16.45■□□□□ 0.22
CLPTM1-208ENST00000588274 PSRC1Q6PGN9 363 aaPredicted RBP16.45■□□□□ 0.22
CLPTM1-208ENST00000588274 CXCL17Q6UXB2 119 aa16.45■□□□□ 0.22
CLPTM1-208ENST00000588274 PI4K2BQ8TCG2 481 aa16.45■□□□□ 0.22
CLPTM1-208ENST00000588274 HERVK_113Q902F9 699 aa16.45■□□□□ 0.22
CLPTM1-208ENST00000588274 WNT8AQ9H1J5 351 aa16.45■□□□□ 0.22
CLPTM1-208ENST00000588274 PRDM12Q9H4Q4 367 aa16.45■□□□□ 0.22
CLPTM1-208ENST00000588274 DCTPP1Q9H773 170 aa16.45■□□□□ 0.22
CLPTM1-208ENST00000588274 YBX2Q9Y2T7 364 aaKnown RBP16.45■□□□□ 0.22
CLPTM1-208ENST00000588274 PATL2C9JE40 543 aaKnown RBP16.44■□□□□ 0.22
CLPTM1-208ENST00000588274 TMEM232C9JQI7 657 aa16.44■□□□□ 0.22
CLPTM1-208ENST00000588274 ZFYP08048 801 aaPredicted RBP16.44■□□□□ 0.22
CLPTM1-208ENST00000588274 SMPD1P17405 629 aa16.44■□□□□ 0.22
CLPTM1-208ENST00000588274 NOVP48745 357 aa16.44■□□□□ 0.22
CLPTM1-208ENST00000588274 AKNAD1Q5T1N1 836 aa16.44■□□□□ 0.22
CLPTM1-208ENST00000588274 TAPT1Q6NXT6 567 aa16.44■□□□□ 0.22
CLPTM1-208ENST00000588274 TLK2Q86UE8 772 aa16.44■□□□□ 0.22
CLPTM1-208ENST00000588274 TMEM199Q8N511 208 aa16.44■□□□□ 0.22
CLPTM1-208ENST00000588274 SYMPKQ92797 1274 aaKnown RBP16.44■□□□□ 0.22
CLPTM1-208ENST00000588274 IL23AQ9NPF7 189 aa16.44■□□□□ 0.22
CLPTM1-208ENST00000588274 PDGFCQ9NRA1 345 aa16.44■□□□□ 0.22
CLPTM1-208ENST00000588274 RNF146Q9NTX7 359 aa16.44■□□□□ 0.22
CLPTM1-208ENST00000588274 BDP1A6H8Y1 2624 aa16.43■□□□□ 0.22
CLPTM1-208ENST00000588274 PLA2G6O60733 806 aa16.43■□□□□ 0.22
CLPTM1-208ENST00000588274 STAT2P52630 851 aa16.43■□□□□ 0.22
CLPTM1-208ENST00000588274 TNFAIP2Q03169 654 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms