RNA–Protein interactions for RNA: ENST00000588228.5

NFIX-210, Transcript of nuclear factor I X, humanhuman

TSL 2 BASIC

Gene NFIX, Length 1,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-210ENST00000588228 ECE1P42892 770 aa18.85■□□□□ 0.61
NFIX-210ENST00000588228 CCDC173Q0VFZ6 552 aa18.85■□□□□ 0.61
NFIX-210ENST00000588228 ARL6IP4Q66PJ3 421 aaKnown RBP18.85■□□□□ 0.61
NFIX-210ENST00000588228 ELOA2Q8IYF1 753 aaPredicted RBP18.85■□□□□ 0.61
NFIX-210ENST00000588228 FAM200AQ8TCP9 573 aa18.85■□□□□ 0.61
NFIX-210ENST00000588228 RIC8AQ9NPQ8 531 aa18.85■□□□□ 0.61
NFIX-210ENST00000588228 GPRC5DQ9NZD1 345 aa18.85■□□□□ 0.61
NFIX-210ENST00000588228 PHF20L1A8MW92 1017 aa18.84■□□□□ 0.61
NFIX-210ENST00000588228 CDC37Q16543 378 aaPredicted RBP18.84■□□□□ 0.61
NFIX-210ENST00000588228 QRICH1Q2TAL8 776 aa18.84■□□□□ 0.61
NFIX-210ENST00000588228 SPECC1Q5M775 1068 aa18.84■□□□□ 0.61
NFIX-210ENST00000588228 SYDE2Q5VT97 1194 aa18.84■□□□□ 0.61
NFIX-210ENST00000588228 C4orf32Q8N8J7 132 aa18.84■□□□□ 0.61
NFIX-210ENST00000588228 ACER1Q8TDN7 264 aa18.84■□□□□ 0.61
NFIX-210ENST00000588228 NUP88Q99567 741 aaPredicted RBP18.84■□□□□ 0.61
NFIX-210ENST00000588228 DEFB129Q9H1M3 183 aa18.84■□□□□ 0.61
NFIX-210ENST00000588228 GINM1Q9NU53 330 aa18.84■□□□□ 0.61
NFIX-210ENST00000588228 KIAA1468Q9P260 1216 aa18.84■□□□□ 0.61
NFIX-210ENST00000588228 ASTN2O75129 1339 aaPredicted RBP18.84■□□□□ 0.61
NFIX-210ENST00000588228 TMEM232C9JQI7 657 aa18.83■□□□□ 0.61
NFIX-210ENST00000588228 STX1AQ16623 288 aa18.83■□□□□ 0.61
NFIX-210ENST00000588228 ANO6Q4KMQ2 910 aa18.83■□□□□ 0.61
NFIX-210ENST00000588228 KRBA2Q6ZNG9 492 aa18.83■□□□□ 0.61
NFIX-210ENST00000588228 APOBEC3FQ8IUX4 373 aaKnown RBP18.83■□□□□ 0.61
NFIX-210ENST00000588228 SYT17Q9BSW7 474 aa18.83■□□□□ 0.61
NFIX-210ENST00000588228 GLT8D2Q9H1C3 349 aa18.83■□□□□ 0.61
NFIX-210ENST00000588228 SCAF8Q9UPN6 1271 aaKnown RBP18.83■□□□□ 0.61
NFIX-210ENST00000588228 LAD1O00515 517 aa18.82■□□□□ 0.6
NFIX-210ENST00000588228 MRPL12P52815 198 aaKnown RBP18.82■□□□□ 0.6
NFIX-210ENST00000588228 ORC2Q13416 577 aaPredicted RBP18.82■□□□□ 0.6
NFIX-210ENST00000588228 NEK8Q86SG6 692 aa18.82■□□□□ 0.6
NFIX-210ENST00000588228 CUL5Q93034 780 aa18.82■□□□□ 0.6
NFIX-210ENST00000588228 PPP1R9BQ96SB3 815 aa18.82■□□□□ 0.6
NFIX-210ENST00000588228 VCPKMTQ9H867 229 aa18.82■□□□□ 0.6
NFIX-210ENST00000588228 BIN2Q9UBW5 565 aaPredicted RBP18.82■□□□□ 0.6
NFIX-210ENST00000588228 IKQ13123 557 aaPredicted RBP18.82■□□□□ 0.6
NFIX-210ENST00000588228 LONRF3Q496Y0 759 aa18.82■□□□□ 0.6
NFIX-210ENST00000588228 JAKMIP3Q5VZ66 844 aa18.82■□□□□ 0.6
NFIX-210ENST00000588228 CNNM3Q8NE01 707 aa18.82■□□□□ 0.6
NFIX-210ENST00000588228 ANO10Q9NW15 660 aa18.82■□□□□ 0.6
NFIX-210ENST00000588228 VWA3AA6NCI4 1184 aa18.81■□□□□ 0.6
NFIX-210ENST00000588228 POLR2DO15514 142 aaKnown RBP18.81■□□□□ 0.6
NFIX-210ENST00000588228 CLK2P49760 499 aaKnown RBP18.81■□□□□ 0.6
NFIX-210ENST00000588228 SPICE1Q8N0Z3 855 aa18.81■□□□□ 0.6
NFIX-210ENST00000588228 TRPM4Q8TD43 1214 aa18.81■□□□□ 0.6
NFIX-210ENST00000588228 TBCKQ8TEA7 893 aa18.81■□□□□ 0.6
NFIX-210ENST00000588228 HOOK2Q96ED9 719 aa18.81■□□□□ 0.6
NFIX-210ENST00000588228 AMNQ9BXJ7 453 aa18.81■□□□□ 0.6
NFIX-210ENST00000588228 TMEM260Q9NX78 707 aa18.81■□□□□ 0.6
NFIX-210ENST00000588228 HOOK1Q9UJC3 728 aaKnown RBP18.81■□□□□ 0.6
NFIX-210ENST00000588228 PCDHA1Q9Y5I3 950 aa18.81■□□□□ 0.6
NFIX-210ENST00000588228 CTNND1O60716 968 aaKnown RBP18.8■□□□□ 0.6
NFIX-210ENST00000588228 LONP1P36776 959 aaKnown RBP18.8■□□□□ 0.6
NFIX-210ENST00000588228 PRPHP41219 470 aa18.8■□□□□ 0.6
NFIX-210ENST00000588228 STAT2P52630 851 aa18.8■□□□□ 0.6
NFIX-210ENST00000588228 KIAA1755Q5JYT7 1200 aa18.8■□□□□ 0.6
NFIX-210ENST00000588228 ANGEL2Q5VTE6 544 aaKnown RBP18.8■□□□□ 0.6
NFIX-210ENST00000588228 DCAF15Q66K64 600 aa18.8■□□□□ 0.6
NFIX-210ENST00000588228 USP49Q70CQ1 688 aa18.8■□□□□ 0.6
NFIX-210ENST00000588228 SYMPKQ92797 1274 aaKnown RBP18.8■□□□□ 0.6
NFIX-210ENST00000588228 PSTPIP2Q9H939 334 aa18.8■□□□□ 0.6
NFIX-210ENST00000588228 PLA2G6O60733 806 aa18.79■□□□□ 0.6
NFIX-210ENST00000588228 ZNF165P49910 485 aa18.79■□□□□ 0.6
NFIX-210ENST00000588228 ZRSR1Q15695 479 aaKnown RBP18.79■□□□□ 0.6
NFIX-210ENST00000588228 LETM2Q2VYF4 491 aa18.79■□□□□ 0.6
NFIX-210ENST00000588228 KANK3Q6NY19 840 aa18.79■□□□□ 0.6
NFIX-210ENST00000588228 EPSTI1Q96J88 318 aa18.79■□□□□ 0.6
NFIX-210ENST00000588228 DNAJC25Q9H1X3 360 aa18.79■□□□□ 0.6
NFIX-210ENST00000588228 CBX8Q9HC52 389 aa18.79■□□□□ 0.6
NFIX-210ENST00000588228 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.79■□□□□ 0.6
NFIX-210ENST00000588228 PRR12Q9ULL5 1215 aa18.79■□□□□ 0.6
NFIX-210ENST00000588228 CCNT1O60563 726 aaKnown RBP18.79■□□□□ 0.6
NFIX-210ENST00000588228 IL17AQ16552 155 aa18.79■□□□□ 0.6
NFIX-210ENST00000588228 FAM83BQ5T0W9 1011 aa18.79■□□□□ 0.6
NFIX-210ENST00000588228 NBPF12Q5TAG4 269 aaPredicted RBP18.79■□□□□ 0.6
NFIX-210ENST00000588228 DTHD1Q6ZMT9 781 aa18.79■□□□□ 0.6
NFIX-210ENST00000588228 FBXO11Q86XK2 927 aa18.79■□□□□ 0.6
NFIX-210ENST00000588228 CHURC1Q8WUH1 139 aa18.79■□□□□ 0.6
NFIX-210ENST00000588228 ERCC4Q92889 916 aaPredicted RBP18.79■□□□□ 0.6
NFIX-210ENST00000588228 PDLIM2Q96JY6 352 aa18.79■□□□□ 0.6
NFIX-210ENST00000588228 PYM1Q9BRP8 204 aaKnown RBP18.79■□□□□ 0.6
NFIX-210ENST00000588228 TUBE1Q9UJT0 475 aa18.79■□□□□ 0.6
NFIX-210ENST00000588228 PPP2R3BQ9Y5P8 575 aa18.79■□□□□ 0.6
NFIX-210ENST00000588228 DICER1Q9UPY3 1922 aaKnown RBP18.79■□□□□ 0.6
NFIX-210ENST00000588228 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.78■□□□□ 0.6
NFIX-210ENST00000588228 ACTN4O43707 911 aaKnown RBP18.78■□□□□ 0.6
NFIX-210ENST00000588228 NEMFO60524 1076 aa18.78■□□□□ 0.6
NFIX-210ENST00000588228 TRAF1Q13077 416 aa18.78■□□□□ 0.6
NFIX-210ENST00000588228 FAM160B2Q86V87 743 aa18.78■□□□□ 0.6
NFIX-210ENST00000588228 CCDC34Q96HJ3 373 aa18.78■□□□□ 0.6
NFIX-210ENST00000588228 ZNF341Q9BYN7 854 aa18.78■□□□□ 0.6
NFIX-210ENST00000588228 TMEM60Q9H2L4 133 aa18.78■□□□□ 0.6
NFIX-210ENST00000588228 RNF181Q9P0P0 153 aa18.78■□□□□ 0.6
NFIX-210ENST00000588228 USP25Q9UHP3 1055 aa18.78■□□□□ 0.6
NFIX-210ENST00000588228 SERTAD1Q9UHV2 236 aa18.78■□□□□ 0.6
NFIX-210ENST00000588228 OR52Z1P0C646 297 aa18.77■□□□□ 0.6
NFIX-210ENST00000588228 EPS15P42566 896 aa18.77■□□□□ 0.6
NFIX-210ENST00000588228 UBE2SQ16763 222 aa18.77■□□□□ 0.6
NFIX-210ENST00000588228 MCTP2Q6DN12 878 aa18.77■□□□□ 0.6
NFIX-210ENST00000588228 FEZ1Q99689 392 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms