RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 CWF19L1Q69YN2 538 aaKnown RBP7.04□□□□□ -1.28
VMP1-205ENST00000587470 CRTC3Q6UUV7 619 aa7.04□□□□□ -1.28
VMP1-205ENST00000587470 CCDC81Q6ZN84 652 aa7.04□□□□□ -1.28
VMP1-205ENST00000587470 PPFIBP1Q86W92 1011 aa7.04□□□□□ -1.28
VMP1-205ENST00000587470 NT5DC4Q86YG4 428 aa7.04□□□□□ -1.28
VMP1-205ENST00000587470 SIAH1Q8IUQ4 282 aa7.04□□□□□ -1.28
VMP1-205ENST00000587470 GPRASP2Q96D09 838 aa7.04□□□□□ -1.28
VMP1-205ENST00000587470 GP6Q9HCN6 339 aa7.04□□□□□ -1.28
VMP1-205ENST00000587470 AP5S1Q9NUS5 200 aa7.04□□□□□ -1.28
VMP1-205ENST00000587470 ERVK13-1Q9NX77 482 aa7.04□□□□□ -1.28
VMP1-205ENST00000587470 ZNF214Q9UL59 606 aaPredicted RBP7.04□□□□□ -1.28
VMP1-205ENST00000587470 SLC12A7Q9Y666 1083 aa7.04□□□□□ -1.28
VMP1-205ENST00000587470 SCRIBQ14160 1630 aa7.03□□□□□ -1.28
VMP1-205ENST00000587470 A0A1W2PQ45 241 aaPredicted RBP7.03□□□□□ -1.28
VMP1-205ENST00000587470 A0A1W2PQY0 241 aa7.03□□□□□ -1.28
VMP1-205ENST00000587470 TP53P04637 393 aaPredicted RBP7.03□□□□□ -1.28
VMP1-205ENST00000587470 CD247P20963 164 aa7.03□□□□□ -1.28
VMP1-205ENST00000587470 NOP2P46087 812 aaKnown RBP7.03□□□□□ -1.28
VMP1-205ENST00000587470 EIF6P56537 245 aaKnown RBP7.03□□□□□ -1.28
VMP1-205ENST00000587470 ZNF445P59923 1031 aa7.03□□□□□ -1.28
VMP1-205ENST00000587470 HSF5Q4G112 596 aaPredicted RBP7.03□□□□□ -1.28
VMP1-205ENST00000587470 LCE5AQ5TCM9 118 aa7.03□□□□□ -1.28
VMP1-205ENST00000587470 AMIGO3Q86WK7 504 aa7.03□□□□□ -1.28
VMP1-205ENST00000587470 PLCD4Q9BRC7 762 aa7.03□□□□□ -1.28
VMP1-205ENST00000587470 GPR55Q9Y2T6 319 aaPredicted RBP7.03□□□□□ -1.28
VMP1-205ENST00000587470 FHOD1Q9Y613 1164 aa7.03□□□□□ -1.28
VMP1-205ENST00000587470 HRKO00198 91 aa7.02□□□□□ -1.29
VMP1-205ENST00000587470 GJA8P48165 433 aa7.02□□□□□ -1.29
VMP1-205ENST00000587470 GIPRP48546 466 aa7.02□□□□□ -1.29
VMP1-205ENST00000587470 RTP2Q5QGT7 225 aa7.02□□□□□ -1.29
VMP1-205ENST00000587470 C9orf131Q5VYM1 1079 aa7.02□□□□□ -1.29
VMP1-205ENST00000587470 SLCO6A1Q86UG4 719 aa7.02□□□□□ -1.29
VMP1-205ENST00000587470 OR6P1Q8NGX9 317 aa7.02□□□□□ -1.29
VMP1-205ENST00000587470 BRF1Q92994 677 aa7.02□□□□□ -1.29
VMP1-205ENST00000587470 SLC12A9Q9BXP2 914 aa7.02□□□□□ -1.29
VMP1-205ENST00000587470 KIAA1522Q9P206 1035 aaPredicted RBP7.02□□□□□ -1.29
VMP1-205ENST00000587470 ZNF451Q9Y4E5 1061 aa7.02□□□□□ -1.29
VMP1-205ENST00000587470 TAF6LQ9Y6J9 622 aa7.02□□□□□ -1.29
VMP1-205ENST00000587470 LTBP3Q9NS15 1303 aa7.01□□□□□ -1.29
VMP1-205ENST00000587470 A0A087WZG4 1122 aa7.01□□□□□ -1.29
VMP1-205ENST00000587470 ZSCAN22P10073 491 aaPredicted RBP7.01□□□□□ -1.29
VMP1-205ENST00000587470 ITGA4P13612 1032 aa7.01□□□□□ -1.29
VMP1-205ENST00000587470 ARL4AP40617 200 aa7.01□□□□□ -1.29
VMP1-205ENST00000587470 LINC00310P59036 64 aa7.01□□□□□ -1.29
VMP1-205ENST00000587470 LAPTM5Q13571 262 aa7.01□□□□□ -1.29
VMP1-205ENST00000587470 TCEAL1Q15170 157 aa7.01□□□□□ -1.29
VMP1-205ENST00000587470 CIAPIN1Q6FI81 312 aa7.01□□□□□ -1.29
VMP1-205ENST00000587470 TTLL10Q6ZVT0 673 aa7.01□□□□□ -1.29
VMP1-205ENST00000587470 TMEM52Q8NDY8 209 aa7.01□□□□□ -1.29
VMP1-205ENST00000587470 SRRTQ9BXP5 876 aaKnown RBP7.01□□□□□ -1.29
VMP1-205ENST00000587470 KRTAP9-3Q9BYQ3 159 aa7.01□□□□□ -1.29
VMP1-205ENST00000587470 KRTAP4-5Q9BYR2 181 aa7.01□□□□□ -1.29
VMP1-205ENST00000587470 FAM86C1Q9NVL1 165 aa7.01□□□□□ -1.29
VMP1-205ENST00000587470 SF3B6Q9Y3B4 125 aaKnown RBP7.01□□□□□ -1.29
VMP1-205ENST00000587470 H0Y8X5 98 aa7□□□□□ -1.29
VMP1-205ENST00000587470 ABLIM1O14639 778 aa7□□□□□ -1.29
VMP1-205ENST00000587470 MPOP05164 745 aa7□□□□□ -1.29
VMP1-205ENST00000587470 GSTM1P09488 218 aa7□□□□□ -1.29
VMP1-205ENST00000587470 CEBPAP49715 358 aaPredicted RBP7□□□□□ -1.29
VMP1-205ENST00000587470 ERVFRD-1P60508 538 aa7□□□□□ -1.29
VMP1-205ENST00000587470 HLA-DQA1Q5Y7H0 255 aa7□□□□□ -1.29
VMP1-205ENST00000587470 FIBCD1Q8N539 461 aa7□□□□□ -1.29
VMP1-205ENST00000587470 NAT16Q8N8M0 369 aa7□□□□□ -1.29
VMP1-205ENST00000587470 C19orf47Q8N9M1 422 aaKnown RBP7□□□□□ -1.29
VMP1-205ENST00000587470 SGPP1Q9BX95 441 aa7□□□□□ -1.29
VMP1-205ENST00000587470 PHAXQ9H814 394 aaKnown RBP7□□□□□ -1.29
VMP1-205ENST00000587470 GCM1Q9NP62 436 aa7□□□□□ -1.29
VMP1-205ENST00000587470 ACSL6Q9UKU0 697 aa7□□□□□ -1.29
VMP1-205ENST00000587470 DIS3Q9Y2L1 958 aaKnown RBP7□□□□□ -1.29
VMP1-205ENST00000587470 UNCXA6NJT0 531 aa6.99□□□□□ -1.29
VMP1-205ENST00000587470 PRKCAP17252 672 aa6.99□□□□□ -1.29
VMP1-205ENST00000587470 YBX1P67809 324 aaKnown RBP6.99□□□□□ -1.29
VMP1-205ENST00000587470 SRSF3P84103 164 aaKnown RBP6.99□□□□□ -1.29
VMP1-205ENST00000587470 CYP4F8P98187 520 aa6.99□□□□□ -1.29
VMP1-205ENST00000587470 KIR3DS1Q14943 382 aa6.99□□□□□ -1.29
VMP1-205ENST00000587470 GNPTABQ3T906 1256 aa6.99□□□□□ -1.29
VMP1-205ENST00000587470 OLFML2BQ68BL8 750 aa6.99□□□□□ -1.29
VMP1-205ENST00000587470 RGS22Q8NE09 1264 aa6.99□□□□□ -1.29
VMP1-205ENST00000587470 SEC16BQ96JE7 1060 aa6.99□□□□□ -1.29
VMP1-205ENST00000587470 SIRT5Q9NXA8 310 aa6.99□□□□□ -1.29
VMP1-205ENST00000587470 A0A1W2PQH9 124 aa6.98□□□□□ -1.29
VMP1-205ENST00000587470 CBFA2T2O43439 604 aa6.98□□□□□ -1.29
VMP1-205ENST00000587470 NUAK1O60285 661 aa6.98□□□□□ -1.29
VMP1-205ENST00000587470 SDHBP21912 280 aa6.98□□□□□ -1.29
VMP1-205ENST00000587470 NASPP49321 788 aaPredicted RBP6.98□□□□□ -1.29
VMP1-205ENST00000587470 POU4F1Q01851 419 aa6.98□□□□□ -1.29
VMP1-205ENST00000587470 NUP43Q8NFH3 380 aa6.98□□□□□ -1.29
VMP1-205ENST00000587470 CPLX3Q8WVH0 158 aa6.98□□□□□ -1.29
VMP1-205ENST00000587470 FCRL3Q96P31 734 aaPredicted RBP6.98□□□□□ -1.29
VMP1-205ENST00000587470 JMJD8Q96S16 334 aa6.98□□□□□ -1.29
VMP1-205ENST00000587470 HAUS7Q99871 368 aa6.98□□□□□ -1.29
VMP1-205ENST00000587470 TGIF2Q9GZN2 237 aa6.98□□□□□ -1.29
VMP1-205ENST00000587470 NOL6Q9H6R4 1146 aaKnown RBP6.98□□□□□ -1.29
VMP1-205ENST00000587470 WHRNQ9P202 907 aa6.98□□□□□ -1.29
VMP1-205ENST00000587470 FGF10O15520 208 aaPredicted RBP6.97□□□□□ -1.29
VMP1-205ENST00000587470 VIPR1P32241 457 aa6.97□□□□□ -1.29
VMP1-205ENST00000587470 SLC7A5Q01650 507 aa6.97□□□□□ -1.29
VMP1-205ENST00000587470 TMEM62Q0P6H9 643 aa6.97□□□□□ -1.29
VMP1-205ENST00000587470 HEATR6Q6AI08 1181 aaKnown RBP6.97□□□□□ -1.29
VMP1-205ENST00000587470 LILRA6Q6PI73 481 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms