RNA–Protein interactions for RNA: ENST00000587062.1

VAT1-203, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-203ENST00000587062 LHX8Q68G74 356 aa23.76■■□□□ 1.39
VAT1-203ENST00000587062 CCDC174Q6PII3 467 aa23.76■■□□□ 1.39
VAT1-203ENST00000587062 PNMA1Q8ND90 353 aa23.76■■□□□ 1.39
VAT1-203ENST00000587062 ANKS1AQ92625 1134 aa23.76■■□□□ 1.39
VAT1-203ENST00000587062 TRERF1Q96PN7 1200 aa23.76■■□□□ 1.39
VAT1-203ENST00000587062 HOMER2Q9NSB8 354 aa23.76■■□□□ 1.39
VAT1-203ENST00000587062 CCPG1Q9ULG6 757 aa23.76■■□□□ 1.39
VAT1-203ENST00000587062 ALAS1P13196 640 aa23.75■■□□□ 1.39
VAT1-203ENST00000587062 SART3Q15020 963 aaKnown RBP23.75■■□□□ 1.39
VAT1-203ENST00000587062 BMP2KLQ5H9B9 411 aa23.75■■□□□ 1.39
VAT1-203ENST00000587062 ZNF467Q7Z7K2 595 aaPredicted RBP23.75■■□□□ 1.39
VAT1-203ENST00000587062 RNF146Q9NTX7 359 aa23.75■■□□□ 1.39
VAT1-203ENST00000587062 PFASO15067 1338 aa23.75■■□□□ 1.39
VAT1-203ENST00000587062 FRMPD2Q68DX3 1309 aaPredicted RBP23.75■■□□□ 1.39
VAT1-203ENST00000587062 IGHA2P01877 340 aa23.74■■□□□ 1.39
VAT1-203ENST00000587062 ICAM1P05362 532 aa23.74■■□□□ 1.39
VAT1-203ENST00000587062 ZNF543Q08ER8 600 aa23.74■■□□□ 1.39
VAT1-203ENST00000587062 IFIT1BQ5T764 474 aaKnown RBP23.74■■□□□ 1.39
VAT1-203ENST00000587062 NCOA7Q8NI08 942 aa23.74■■□□□ 1.39
VAT1-203ENST00000587062 AGBL1Q96MI9 1066 aa23.74■■□□□ 1.39
VAT1-203ENST00000587062 IL25Q9H293 177 aa23.74■■□□□ 1.39
VAT1-203ENST00000587062 RANBP17Q9H2T7 1088 aaKnown RBP23.74■■□□□ 1.39
VAT1-203ENST00000587062 TNKSO95271 1327 aa23.74■■□□□ 1.39
VAT1-203ENST00000587062 SYNGAP1Q96PV0 1343 aa23.74■■□□□ 1.39
VAT1-203ENST00000587062 POTEB2H3BUK9 544 aa23.73■■□□□ 1.39
VAT1-203ENST00000587062 SNHG28P0DPA3 235 aa23.73■■□□□ 1.39
VAT1-203ENST00000587062 SLC16A2P36021 539 aa23.73■■□□□ 1.39
VAT1-203ENST00000587062 PTH1RQ03431 593 aa23.73■■□□□ 1.39
VAT1-203ENST00000587062 TTBK2Q6IQ55 1244 aa23.73■■□□□ 1.39
VAT1-203ENST00000587062 MAP4K1Q92918 833 aa23.73■■□□□ 1.39
VAT1-203ENST00000587062 DNAJC25-GNG10A0A024R161 153 aa23.72■■□□□ 1.39
VAT1-203ENST00000587062 CYP21A2P08686 494 aa23.72■■□□□ 1.39
VAT1-203ENST00000587062 RARBP10826 455 aa23.72■■□□□ 1.39
VAT1-203ENST00000587062 ASPRV1Q53RT3 343 aa23.72■■□□□ 1.39
VAT1-203ENST00000587062 MAMDC4Q6UXC1 1216 aa23.72■■□□□ 1.39
VAT1-203ENST00000587062 ENAHQ8N8S7 591 aaPredicted RBP23.72■■□□□ 1.39
VAT1-203ENST00000587062 ZNF536O15090 1300 aa23.72■■□□□ 1.39
VAT1-203ENST00000587062 PLXNA1Q9UIW2 1896 aa23.72■■□□□ 1.39
VAT1-203ENST00000587062 TNRC18O15417 2968 aaPredicted RBP23.71■■□□□ 1.39
VAT1-203ENST00000587062 KBTBD13C9JR72 458 aa23.71■■□□□ 1.39
VAT1-203ENST00000587062 AKR1A1P14550 325 aa23.71■■□□□ 1.39
VAT1-203ENST00000587062 PRAMEF19Q5SWL8 479 aa23.71■■□□□ 1.39
VAT1-203ENST00000587062 TRPV1Q8NER1 839 aa23.71■■□□□ 1.39
VAT1-203ENST00000587062 DIS3LQ8TF46 1054 aaKnown RBP23.71■■□□□ 1.39
VAT1-203ENST00000587062 ASB14A6NK59 587 aa23.7■■□□□ 1.38
VAT1-203ENST00000587062 DNM1LO00429 736 aa23.7■■□□□ 1.38
VAT1-203ENST00000587062 PARP1P09874 1014 aaKnown RBP23.7■■□□□ 1.38
VAT1-203ENST00000587062 ESYT1Q9BSJ8 1104 aa23.7■■□□□ 1.38
VAT1-203ENST00000587062 ABHD16BQ9H3Z7 469 aa23.7■■□□□ 1.38
VAT1-203ENST00000587062 FAM184BQ9ULE4 1060 aa23.7■■□□□ 1.38
VAT1-203ENST00000587062 RBM8AQ9Y5S9 174 aaKnown RBP23.7■■□□□ 1.38
VAT1-203ENST00000587062 E7EWF7 191 aa23.69■■□□□ 1.38
VAT1-203ENST00000587062 IFIT3O14879 490 aaKnown RBP23.69■■□□□ 1.38
VAT1-203ENST00000587062 DHX16O60231 1041 aaKnown RBP23.69■■□□□ 1.38
VAT1-203ENST00000587062 SNAP25P60880 206 aa23.69■■□□□ 1.38
VAT1-203ENST00000587062 RASGRP2Q7LDG7 609 aa23.69■■□□□ 1.38
VAT1-203ENST00000587062 MPHOSPH6Q99547 160 aaKnown RBP23.69■■□□□ 1.38
VAT1-203ENST00000587062 H0YGN5 161 aa23.68■■□□□ 1.38
VAT1-203ENST00000587062 MYCNP04198 464 aaPredicted RBP23.68■■□□□ 1.38
VAT1-203ENST00000587062 CENPBP07199 599 aaPredicted RBP23.68■■□□□ 1.38
VAT1-203ENST00000587062 NSMFQ6X4W1 530 aa23.68■■□□□ 1.38
VAT1-203ENST00000587062 RNF180Q86T96 592 aa23.68■■□□□ 1.38
VAT1-203ENST00000587062 SENP6Q9GZR1 1112 aaPredicted RBP23.68■■□□□ 1.38
VAT1-203ENST00000587062 A1CFQ9NQ94 594 aaKnown RBP23.68■■□□□ 1.38
VAT1-203ENST00000587062 ADD3Q9UEY8 706 aaKnown RBP23.68■■□□□ 1.38
VAT1-203ENST00000587062 WDR19Q8NEZ3 1342 aa23.67■■□□□ 1.38
VAT1-203ENST00000587062 GOLGA8HP0CJ92 632 aa23.67■■□□□ 1.38
VAT1-203ENST00000587062 RNF20Q5VTR2 975 aa23.67■■□□□ 1.38
VAT1-203ENST00000587062 SPC25Q9HBM1 224 aa23.67■■□□□ 1.38
VAT1-203ENST00000587062 ANO2Q9NQ90 1003 aa23.67■■□□□ 1.38
VAT1-203ENST00000587062 XPNPEP3Q9NQH7 507 aa23.67■■□□□ 1.38
VAT1-203ENST00000587062 ZHX1Q9UKY1 873 aaPredicted RBP23.67■■□□□ 1.38
VAT1-203ENST00000587062 B4DLN1 442 aa23.66■■□□□ 1.38
VAT1-203ENST00000587062 MNX1P50219 401 aaPredicted RBP23.66■■□□□ 1.38
VAT1-203ENST00000587062 MRPL12P52815 198 aaKnown RBP23.66■■□□□ 1.38
VAT1-203ENST00000587062 ACVR2BQ13705 512 aa23.66■■□□□ 1.38
VAT1-203ENST00000587062 WTAPQ15007 396 aa23.66■■□□□ 1.38
VAT1-203ENST00000587062 MAF1Q9H063 256 aa23.66■■□□□ 1.38
VAT1-203ENST00000587062 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.66■■□□□ 1.38
VAT1-203ENST00000587062 ZNF865P0CJ78 1059 aaPredicted RBP23.65■■□□□ 1.38
VAT1-203ENST00000587062 COL6A1P12109 1028 aa23.65■■□□□ 1.38
VAT1-203ENST00000587062 TRAF1Q13077 416 aa23.65■■□□□ 1.38
VAT1-203ENST00000587062 MUM1L1Q5H9M0 696 aa23.65■■□□□ 1.38
VAT1-203ENST00000587062 GJC2Q5T442 439 aaPredicted RBP23.65■■□□□ 1.38
VAT1-203ENST00000587062 ANO1Q5XXA6 986 aa23.65■■□□□ 1.38
VAT1-203ENST00000587062 CYB5R4Q7L1T6 521 aa23.65■■□□□ 1.38
VAT1-203ENST00000587062 ARMCX2Q7L311 632 aa23.65■■□□□ 1.38
VAT1-203ENST00000587062 TMTC2Q8N394 836 aa23.65■■□□□ 1.38
VAT1-203ENST00000587062 FAM133AQ8N9E0 248 aa23.65■■□□□ 1.38
VAT1-203ENST00000587062 UBA5Q9GZZ9 404 aa23.65■■□□□ 1.38
VAT1-203ENST00000587062 CYP39A1Q9NYL5 469 aa23.65■■□□□ 1.38
VAT1-203ENST00000587062 BRCA2P51587 3418 aa23.65■■□□□ 1.38
VAT1-203ENST00000587062 LOC102724159A0A0B4J2E5 919 aa23.64■■□□□ 1.37
VAT1-203ENST00000587062 PTPDC1A2A3K4 754 aa23.64■■□□□ 1.37
VAT1-203ENST00000587062 CDC45O75419 566 aa23.64■■□□□ 1.37
VAT1-203ENST00000587062 SNAI1O95863 264 aaPredicted RBP23.64■■□□□ 1.37
VAT1-203ENST00000587062 CNTN2Q02246 1040 aa23.64■■□□□ 1.37
VAT1-203ENST00000587062 PWP2Q15269 919 aaKnown RBP23.64■■□□□ 1.37
VAT1-203ENST00000587062 SEC23AQ15436 765 aa23.64■■□□□ 1.37
VAT1-203ENST00000587062 TMEM67Q5HYA8 995 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms