RNA–Protein interactions for RNA: ENST00000586253.1

SMAD4-204, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-204ENST00000586253 USP17L24Q0WX57 530 aa9.44□□□□□ -0.9
SMAD4-204ENST00000586253 DGKZQ13574 1117 aa9.44□□□□□ -0.9
SMAD4-204ENST00000586253 CREB3L3Q68CJ9 461 aa9.44□□□□□ -0.9
SMAD4-204ENST00000586253 ZNF598Q86UK7 904 aaKnown RBP9.44□□□□□ -0.9
SMAD4-204ENST00000586253 IQCA1Q86XH1 822 aa9.44□□□□□ -0.9
SMAD4-204ENST00000586253 GMCL1P1Q8NEA9 526 aa9.44□□□□□ -0.9
SMAD4-204ENST00000586253 NCOA7Q8NI08 942 aa9.44□□□□□ -0.9
SMAD4-204ENST00000586253 GTF3C2Q8WUA4 911 aaPredicted RBP9.44□□□□□ -0.9
SMAD4-204ENST00000586253 PRDM10Q9NQV6 1147 aa9.44□□□□□ -0.9
SMAD4-204ENST00000586253 CLIP2Q9UDT6 1046 aa9.44□□□□□ -0.9
SMAD4-204ENST00000586253 STX8Q9UNK0 236 aa9.44□□□□□ -0.9
SMAD4-204ENST00000586253 ADGRA2Q96PE1 1338 aa9.44□□□□□ -0.9
SMAD4-204ENST00000586253 MYPNQ86TC9 1320 aa9.43□□□□□ -0.9
SMAD4-204ENST00000586253 B4E1Z4 1266 aa9.43□□□□□ -0.9
SMAD4-204ENST00000586253 E7EWF7 191 aa9.43□□□□□ -0.9
SMAD4-204ENST00000586253 F5H6K3 240 aa9.43□□□□□ -0.9
SMAD4-204ENST00000586253 GPR25O00155 361 aa9.43□□□□□ -0.9
SMAD4-204ENST00000586253 SLC27A2O14975 620 aa9.43□□□□□ -0.9
SMAD4-204ENST00000586253 GDF9O60383 454 aa9.43□□□□□ -0.9
SMAD4-204ENST00000586253 TOP1P11387 765 aaKnown RBP9.43□□□□□ -0.9
SMAD4-204ENST00000586253 GCLCP48506 637 aaPredicted RBP9.43□□□□□ -0.9
SMAD4-204ENST00000586253 IRX3P78415 501 aaPredicted RBP9.43□□□□□ -0.9
SMAD4-204ENST00000586253 KLRC3Q07444 240 aa9.43□□□□□ -0.9
SMAD4-204ENST00000586253 ZYXQ15942 572 aaKnown RBP9.43□□□□□ -0.9
SMAD4-204ENST00000586253 TSGA10IPQ3SY00 556 aa9.43□□□□□ -0.9
SMAD4-204ENST00000586253 ZNF787Q6DD87 383 aa9.43□□□□□ -0.9
SMAD4-204ENST00000586253 C17orf99Q6UX52 265 aa9.43□□□□□ -0.9
SMAD4-204ENST00000586253 LBX2Q6XYB7 198 aa9.43□□□□□ -0.9
SMAD4-204ENST00000586253 CATSPERGQ6ZRH7 1159 aa9.43□□□□□ -0.9
SMAD4-204ENST00000586253 RALYLQ86SE5 291 aaKnown RBP9.43□□□□□ -0.9
SMAD4-204ENST00000586253 DGKHQ86XP1 1220 aa9.43□□□□□ -0.9
SMAD4-204ENST00000586253 SMCR8Q8TEV9 937 aaPredicted RBP9.43□□□□□ -0.9
SMAD4-204ENST00000586253 ANKS1AQ92625 1134 aa9.43□□□□□ -0.9
SMAD4-204ENST00000586253 MTA3Q9BTC8 594 aa9.43□□□□□ -0.9
SMAD4-204ENST00000586253 ASCC2Q9H1I8 757 aaPredicted RBP9.43□□□□□ -0.9
SMAD4-204ENST00000586253 RPAP3Q9H6T3 665 aaPredicted RBP9.43□□□□□ -0.9
SMAD4-204ENST00000586253 NMT2O60551 498 aa9.42□□□□□ -0.9
SMAD4-204ENST00000586253 FKTNO75072 461 aa9.42□□□□□ -0.9
SMAD4-204ENST00000586253 NDUFB10O96000 172 aa9.42□□□□□ -0.9
SMAD4-204ENST00000586253 ADH1BP00325 375 aa9.42□□□□□ -0.9
SMAD4-204ENST00000586253 CYP2C8P10632 490 aa9.42□□□□□ -0.9
SMAD4-204ENST00000586253 BCRP11274 1271 aa9.42□□□□□ -0.9
SMAD4-204ENST00000586253 ZKSCAN1P17029 563 aaPredicted RBP9.42□□□□□ -0.9
SMAD4-204ENST00000586253 HSPA4P34932 840 aa9.42□□□□□ -0.9
SMAD4-204ENST00000586253 LBX1P52954 281 aa9.42□□□□□ -0.9
SMAD4-204ENST00000586253 KRT32Q14532 448 aa9.42□□□□□ -0.9
SMAD4-204ENST00000586253 KMT5BQ4FZB7 885 aa9.42□□□□□ -0.9
SMAD4-204ENST00000586253 KIAA1755Q5JYT7 1200 aa9.42□□□□□ -0.9
SMAD4-204ENST00000586253 RCSD1Q6JBY9 416 aa9.42□□□□□ -0.9
SMAD4-204ENST00000586253 STOX1Q6ZVD7 989 aa9.42□□□□□ -0.9
SMAD4-204ENST00000586253 KCNB2Q92953 911 aa9.42□□□□□ -0.9
SMAD4-204ENST00000586253 GMCL1Q96IK5 515 aa9.42□□□□□ -0.9
SMAD4-204ENST00000586253 ZSCAN10Q96SZ4 725 aaPredicted RBP9.42□□□□□ -0.9
SMAD4-204ENST00000586253 UBAC1Q9BSL1 405 aa9.42□□□□□ -0.9
SMAD4-204ENST00000586253 R3HDMLQ9H3Y0 253 aa9.42□□□□□ -0.9
SMAD4-204ENST00000586253 ZSWIM5Q9P217 1185 aa9.42□□□□□ -0.9
SMAD4-204ENST00000586253 TAF6LQ9Y6J9 622 aa9.42□□□□□ -0.9
SMAD4-204ENST00000586253 RLFQ13129 1914 aa9.41□□□□□ -0.9
SMAD4-204ENST00000586253 TNKSO95271 1327 aa9.41□□□□□ -0.9
SMAD4-204ENST00000586253 PARP14Q460N5 1801 aa9.41□□□□□ -0.9
SMAD4-204ENST00000586253 HERVK_113P62684 666 aa9.41□□□□□ -0.9
SMAD4-204ENST00000586253 SP3Q02447 781 aa9.41□□□□□ -0.9
SMAD4-204ENST00000586253 COG2Q14746 738 aa9.41□□□□□ -0.9
SMAD4-204ENST00000586253 SART3Q15020 963 aaKnown RBP9.41□□□□□ -0.9
SMAD4-204ENST00000586253 AMHR2Q16671 573 aa9.41□□□□□ -0.9
SMAD4-204ENST00000586253 FAM110CQ1W6H9 321 aa9.41□□□□□ -0.9
SMAD4-204ENST00000586253 SLFN13Q68D06 897 aa9.41□□□□□ -0.9
SMAD4-204ENST00000586253 MB21D2Q8IYB1 491 aaPredicted RBP9.41□□□□□ -0.9
SMAD4-204ENST00000586253 SPICE1Q8N0Z3 855 aa9.41□□□□□ -0.9
SMAD4-204ENST00000586253 LRRC47Q8N1G4 583 aaKnown RBP9.41□□□□□ -0.9
SMAD4-204ENST00000586253 ENAHQ8N8S7 591 aaPredicted RBP9.41□□□□□ -0.9
SMAD4-204ENST00000586253 ZNF296Q8WUU4 475 aaPredicted RBP9.41□□□□□ -0.9
SMAD4-204ENST00000586253 P2RX7Q99572 595 aaKnown RBP9.41□□□□□ -0.9
SMAD4-204ENST00000586253 TMEM47Q9BQJ4 181 aa9.41□□□□□ -0.9
SMAD4-204ENST00000586253 USP26Q9BXU7 913 aa9.41□□□□□ -0.9
SMAD4-204ENST00000586253 FAM117AQ9C073 453 aa9.41□□□□□ -0.9
SMAD4-204ENST00000586253 TANGO6Q9C0B7 1094 aa9.41□□□□□ -0.9
SMAD4-204ENST00000586253 HOXC10Q9NYD6 342 aa9.41□□□□□ -0.9
SMAD4-204ENST00000586253 A0A0G2JMZ2 1700 aa9.4□□□□□ -0.9
SMAD4-204ENST00000586253 WDR19Q8NEZ3 1342 aa9.4□□□□□ -0.9
SMAD4-204ENST00000586253 ERICH2A1L162 156 aa9.4□□□□□ -0.9
SMAD4-204ENST00000586253 PLA2G6O60733 806 aa9.4□□□□□ -0.9
SMAD4-204ENST00000586253 FLOT1O75955 427 aa9.4□□□□□ -0.9
SMAD4-204ENST00000586253 HMGB1P09429 215 aaKnown RBP9.4□□□□□ -0.9
SMAD4-204ENST00000586253 MCCP23508 829 aa9.4□□□□□ -0.9
SMAD4-204ENST00000586253 MCM5P33992 734 aa9.4□□□□□ -0.9
SMAD4-204ENST00000586253 SLC1A4P43007 532 aa9.4□□□□□ -0.9
SMAD4-204ENST00000586253 HIC1Q14526 733 aa9.4□□□□□ -0.9
SMAD4-204ENST00000586253 ARHGEF6Q15052 776 aa9.4□□□□□ -0.9
SMAD4-204ENST00000586253 FAM83BQ5T0W9 1011 aa9.4□□□□□ -0.9
SMAD4-204ENST00000586253 CYB5R4Q7L1T6 521 aa9.4□□□□□ -0.9
SMAD4-204ENST00000586253 METTL3Q86U44 580 aaKnown RBP9.4□□□□□ -0.9
SMAD4-204ENST00000586253 SCUBE3Q8IX30 993 aa9.4□□□□□ -0.9
SMAD4-204ENST00000586253 MB21D1Q8N884 522 aa9.4□□□□□ -0.9
SMAD4-204ENST00000586253 DCAF4Q8WV16 495 aa9.4□□□□□ -0.9
SMAD4-204ENST00000586253 ZNF775Q96BV0 537 aaPredicted RBP9.4□□□□□ -0.9
SMAD4-204ENST00000586253 ERO1AQ96HE7 468 aa9.4□□□□□ -0.9
SMAD4-204ENST00000586253 ZKSCAN3Q9BRR0 538 aa9.4□□□□□ -0.9
SMAD4-204ENST00000586253 MORF4L1Q9UBU8 362 aa9.4□□□□□ -0.9
SMAD4-204ENST00000586253 CPA4Q9UI42 421 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms