RNA–Protein interactions for RNA: ENST00000586134.5

ZNF540-203, Transcript of zinc finger protein 540, humanhuman

TSL 5

Gene ZNF540, Length 2,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-203ENST00000586134 GSPT1P15170 499 aaKnown RBP11.14□□□□□ -0.63
ZNF540-203ENST00000586134 SFPQP23246 707 aaKnown RBP eCLIP11.14□□□□□ -0.63
ZNF540-203ENST00000586134 DYNC1I2Q13409 638 aaKnown RBP11.14□□□□□ -0.63
ZNF540-203ENST00000586134 C15orf52Q6ZUT6 534 aaKnown RBP11.14□□□□□ -0.63
ZNF540-203ENST00000586134 LSM14AQ8ND56 463 aaKnown RBP11.14□□□□□ -0.63
ZNF540-203ENST00000586134 FAM76AQ8TAV0 307 aa11.14□□□□□ -0.63
ZNF540-203ENST00000586134 HHIPL1Q96JK4 782 aa11.14□□□□□ -0.63
ZNF540-203ENST00000586134 CLSTN2Q9H4D0 955 aa11.14□□□□□ -0.63
ZNF540-203ENST00000586134 DBNDD1Q9H9R9 158 aa11.14□□□□□ -0.63
ZNF540-203ENST00000586134 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.14□□□□□ -0.63
ZNF540-203ENST00000586134 IPO5O00410 1097 aaKnown RBP11.13□□□□□ -0.63
ZNF540-203ENST00000586134 FIBPO43427 364 aa11.13□□□□□ -0.63
ZNF540-203ENST00000586134 STX6O43752 255 aa11.13□□□□□ -0.63
ZNF540-203ENST00000586134 ITGA6P23229 1130 aa11.13□□□□□ -0.63
ZNF540-203ENST00000586134 CCT4P50991 539 aaKnown RBP11.13□□□□□ -0.63
ZNF540-203ENST00000586134 FOXO4P98177 505 aa11.13□□□□□ -0.63
ZNF540-203ENST00000586134 KLHL10Q6JEL2 608 aa11.13□□□□□ -0.63
ZNF540-203ENST00000586134 BZW1Q7L1Q6 419 aaKnown RBP11.13□□□□□ -0.63
ZNF540-203ENST00000586134 LEO1Q8WVC0 666 aaPredicted RBP11.13□□□□□ -0.63
ZNF540-203ENST00000586134 CUL5Q93034 780 aa11.13□□□□□ -0.63
ZNF540-203ENST00000586134 TSC22D3Q99576 134 aa11.13□□□□□ -0.63
ZNF540-203ENST00000586134 SLC40A1Q9NP59 571 aa11.13□□□□□ -0.63
ZNF540-203ENST00000586134 SPATA7Q9P0W8 599 aa11.13□□□□□ -0.63
ZNF540-203ENST00000586134 ABCF2Q9UG63 623 aa11.13□□□□□ -0.63
ZNF540-203ENST00000586134 WDR37Q9Y2I8 494 aa11.13□□□□□ -0.63
ZNF540-203ENST00000586134 RIMBP2O15034 1052 aa11.13□□□□□ -0.63
ZNF540-203ENST00000586134 SESN3P58005 492 aa11.13□□□□□ -0.63
ZNF540-203ENST00000586134 ZNF280AP59817 542 aaPredicted RBP11.13□□□□□ -0.63
ZNF540-203ENST00000586134 USP4Q13107 963 aa11.13□□□□□ -0.63
ZNF540-203ENST00000586134 SRGAP1Q7Z6B7 1085 aa11.13□□□□□ -0.63
ZNF540-203ENST00000586134 MICALL2Q8IY33 904 aa11.13□□□□□ -0.63
ZNF540-203ENST00000586134 MRPL50Q8N5N7 158 aaKnown RBP11.13□□□□□ -0.63
ZNF540-203ENST00000586134 SAMD3Q8N6K7 520 aa11.13□□□□□ -0.63
ZNF540-203ENST00000586134 GBP7Q8N8V2 638 aaPredicted RBP11.13□□□□□ -0.63
ZNF540-203ENST00000586134 POLR3CQ9BUI4 534 aaPredicted RBP11.13□□□□□ -0.63
ZNF540-203ENST00000586134 COA1Q9GZY4 146 aa11.13□□□□□ -0.63
ZNF540-203ENST00000586134 EBF2Q9HAK2 575 aa11.13□□□□□ -0.63
ZNF540-203ENST00000586134 DNAAF2Q9NVR5 837 aaKnown RBP11.13□□□□□ -0.63
ZNF540-203ENST00000586134 HOOK1Q9UJC3 728 aaKnown RBP11.13□□□□□ -0.63
ZNF540-203ENST00000586134 MYO3BQ8WXR4 1341 aa11.12□□□□□ -0.63
ZNF540-203ENST00000586134 B4DLN1 442 aa11.12□□□□□ -0.63
ZNF540-203ENST00000586134 LUC7L3O95232 432 aaKnown RBP11.12□□□□□ -0.63
ZNF540-203ENST00000586134 MCM3P25205 808 aa11.12□□□□□ -0.63
ZNF540-203ENST00000586134 RSBN1LQ6PCB5 846 aaPredicted RBP11.12□□□□□ -0.63
ZNF540-203ENST00000586134 CRELD2Q6UXH1 353 aaPredicted RBP11.12□□□□□ -0.63
ZNF540-203ENST00000586134 CDC37L1Q7L3B6 337 aa11.12□□□□□ -0.63
ZNF540-203ENST00000586134 CCHCR1Q8TD31 782 aa11.12□□□□□ -0.63
ZNF540-203ENST00000586134 KCNV2Q8TDN2 545 aa11.12□□□□□ -0.63
ZNF540-203ENST00000586134 GMLQ99445 158 aa11.12□□□□□ -0.63
ZNF540-203ENST00000586134 F6X3S4 739 aa11.11□□□□□ -0.63
ZNF540-203ENST00000586134 F8VZ95 297 aa11.11□□□□□ -0.63
ZNF540-203ENST00000586134 G3V3G9 751 aa11.11□□□□□ -0.63
ZNF540-203ENST00000586134 CREB3O43889 395 aa11.11□□□□□ -0.63
ZNF540-203ENST00000586134 MGRN1O60291 552 aa11.11□□□□□ -0.63
ZNF540-203ENST00000586134 HIRAP54198 1017 aaPredicted RBP11.11□□□□□ -0.63
ZNF540-203ENST00000586134 CHMP4BP1P59074 171 aa11.11□□□□□ -0.63
ZNF540-203ENST00000586134 IFIT5Q13325 482 aaKnown RBP11.11□□□□□ -0.63
ZNF540-203ENST00000586134 PRPF4BQ13523 1007 aaKnown RBP11.11□□□□□ -0.63
ZNF540-203ENST00000586134 DCAF8Q5TAQ9 597 aa11.11□□□□□ -0.63
ZNF540-203ENST00000586134 CYB5D1Q6P9G0 228 aa11.11□□□□□ -0.63
ZNF540-203ENST00000586134 PLEKHM2Q8IWE5 1019 aa11.11□□□□□ -0.63
ZNF540-203ENST00000586134 LZICQ8WZA0 190 aa11.11□□□□□ -0.63
ZNF540-203ENST00000586134 CCDC85AQ96PX6 553 aaPredicted RBP11.11□□□□□ -0.63
ZNF540-203ENST00000586134 CAPS2Q9BXY5 557 aa11.11□□□□□ -0.63
ZNF540-203ENST00000586134 EPC1Q9H2F5 836 aa11.11□□□□□ -0.63
ZNF540-203ENST00000586134 ABCB6Q9NP58 842 aa11.11□□□□□ -0.63
ZNF540-203ENST00000586134 FRMD4BQ9Y2L6 1034 aa11.11□□□□□ -0.63
ZNF540-203ENST00000586134 ECM29Q5VYK3 1845 aa11.11□□□□□ -0.63
ZNF540-203ENST00000586134 USP17L3A6NCW0 530 aa11.11□□□□□ -0.63
ZNF540-203ENST00000586134 USP17L4A6NCW7 530 aa11.11□□□□□ -0.63
ZNF540-203ENST00000586134 SYF2O95926 243 aaKnown RBP11.11□□□□□ -0.63
ZNF540-203ENST00000586134 PABPC4Q13310 644 aaKnown RBP eCLIP11.11□□□□□ -0.63
ZNF540-203ENST00000586134 DOK7Q18PE1 504 aa11.11□□□□□ -0.63
ZNF540-203ENST00000586134 DEFB115Q30KQ5 88 aa11.11□□□□□ -0.63
ZNF540-203ENST00000586134 USP17L1Q7RTZ2 530 aa11.11□□□□□ -0.63
ZNF540-203ENST00000586134 CXorf38Q8TB03 319 aa11.11□□□□□ -0.63
ZNF540-203ENST00000586134 TRPM4Q8TD43 1214 aa11.11□□□□□ -0.63
ZNF540-203ENST00000586134 JAKMIP2Q96AA8 810 aa11.11□□□□□ -0.63
ZNF540-203ENST00000586134 KAT14Q9H8E8 782 aa11.11□□□□□ -0.63
ZNF540-203ENST00000586134 ANKZF1Q9H8Y5 726 aa11.11□□□□□ -0.63
ZNF540-203ENST00000586134 RTEL1Q9NZ71 1219 aa11.11□□□□□ -0.63
ZNF540-203ENST00000586134 TPCN1Q9ULQ1 816 aa11.11□□□□□ -0.63
ZNF540-203ENST00000586134 TMEM98Q9Y2Y6 226 aa11.11□□□□□ -0.63
ZNF540-203ENST00000586134 TLL2Q9Y6L7 1015 aa11.11□□□□□ -0.63
ZNF540-203ENST00000586134 ZNF804BA4D1E1 1349 aa11.11□□□□□ -0.63
ZNF540-203ENST00000586134 A6NHS1 94 aa11.1□□□□□ -0.63
ZNF540-203ENST00000586134 ABLIM1O14639 778 aa11.1□□□□□ -0.63
ZNF540-203ENST00000586134 ATP6V1G1O75348 118 aa11.1□□□□□ -0.63
ZNF540-203ENST00000586134 SLC4A8Q2Y0W8 1093 aa11.1□□□□□ -0.63
ZNF540-203ENST00000586134 KBTBD12Q3ZCT8 623 aa11.1□□□□□ -0.63
ZNF540-203ENST00000586134 STRIP1Q5VSL9 837 aa11.1□□□□□ -0.63
ZNF540-203ENST00000586134 KIAA0825Q8IV33 1275 aa11.1□□□□□ -0.63
ZNF540-203ENST00000586134 CCDC13Q8IYE1 715 aa11.1□□□□□ -0.63
ZNF540-203ENST00000586134 DNAJC25Q9H1X3 360 aa11.1□□□□□ -0.63
ZNF540-203ENST00000586134 TMEM165Q9HC07 324 aa11.1□□□□□ -0.63
ZNF540-203ENST00000586134 C9orf78Q9NZ63 289 aaPredicted RBP11.1□□□□□ -0.63
ZNF540-203ENST00000586134 GMEB1Q9Y692 573 aa11.1□□□□□ -0.63
ZNF540-203ENST00000586134 PITPNM2Q9BZ72 1349 aa11.1□□□□□ -0.63
ZNF540-203ENST00000586134 ARAP2Q8WZ64 1704 aa11.09□□□□□ -0.63
ZNF540-203ENST00000586134 PHACTR2O75167 634 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms