RNA–Protein interactions for RNA: ENST00000584966.1

CDH8-213, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-213ENST00000584966 TSHZ3Q63HK5 1081 aa6.87□□□□□ -1.31
CDH8-213ENST00000584966 CHD1LQ86WJ1 897 aa6.87□□□□□ -1.31
CDH8-213ENST00000584966 VPS37DQ86XT2 251 aa6.87□□□□□ -1.31
CDH8-213ENST00000584966 ANKMY2Q8IV38 441 aa6.87□□□□□ -1.31
CDH8-213ENST00000584966 WDR66Q8TBY9 1149 aa6.87□□□□□ -1.31
CDH8-213ENST00000584966 PI4K2BQ8TCG2 481 aa6.87□□□□□ -1.31
CDH8-213ENST00000584966 FAM200AQ8TCP9 573 aa6.87□□□□□ -1.31
CDH8-213ENST00000584966 TRPM4Q8TD43 1214 aa6.87□□□□□ -1.31
CDH8-213ENST00000584966 ZNF526Q8TF50 670 aaPredicted RBP6.87□□□□□ -1.31
CDH8-213ENST00000584966 TBC1D22AQ8WUA7 517 aa6.87□□□□□ -1.31
CDH8-213ENST00000584966 MRIQ9BWK5 157 aa6.87□□□□□ -1.31
CDH8-213ENST00000584966 TAF1DQ9H5J8 278 aaPredicted RBP6.87□□□□□ -1.31
CDH8-213ENST00000584966 ANTXR1Q9H6X2 564 aa6.87□□□□□ -1.31
CDH8-213ENST00000584966 PIH1D3Q9NQM4 214 aaKnown RBP6.87□□□□□ -1.31
CDH8-213ENST00000584966 GNL3LQ9NVN8 582 aaKnown RBP6.87□□□□□ -1.31
CDH8-213ENST00000584966 STAP2Q9UGK3 403 aa6.87□□□□□ -1.31
CDH8-213ENST00000584966 PGAP2Q9UHJ9 254 aa6.87□□□□□ -1.31
CDH8-213ENST00000584966 BAZ2AQ9UIF9 1905 aaKnown RBP6.87□□□□□ -1.31
CDH8-213ENST00000584966 CEP350Q5VT06 3117 aa6.86□□□□□ -1.31
CDH8-213ENST00000584966 ASTN2O75129 1339 aaPredicted RBP6.86□□□□□ -1.31
CDH8-213ENST00000584966 MYO3BQ8WXR4 1341 aa6.86□□□□□ -1.31
CDH8-213ENST00000584966 A0A1W2PNR3 127 aa6.86□□□□□ -1.31
CDH8-213ENST00000584966 M0R082 166 aa6.86□□□□□ -1.31
CDH8-213ENST00000584966 VEGFAP15692 232 aaPredicted RBP6.86□□□□□ -1.31
CDH8-213ENST00000584966 PRDX5P30044 214 aa6.86□□□□□ -1.31
CDH8-213ENST00000584966 EPHX2P34913 555 aa6.86□□□□□ -1.31
CDH8-213ENST00000584966 PDE1AP54750 535 aa6.86□□□□□ -1.31
CDH8-213ENST00000584966 CLDN10P78369 228 aa6.86□□□□□ -1.31
CDH8-213ENST00000584966 ARSJQ5FYB0 599 aaPredicted RBP6.86□□□□□ -1.31
CDH8-213ENST00000584966 TTC39AQ5SRH9 613 aa6.86□□□□□ -1.31
CDH8-213ENST00000584966 LCE1DQ5T752 114 aa6.86□□□□□ -1.31
CDH8-213ENST00000584966 GORABQ5T7V8 394 aa6.86□□□□□ -1.31
CDH8-213ENST00000584966 KIAA0825Q8IV33 1275 aa6.86□□□□□ -1.31
CDH8-213ENST00000584966 ZNF417Q8TAU3 575 aa6.86□□□□□ -1.31
CDH8-213ENST00000584966 EDC3Q96F86 508 aaKnown RBP6.86□□□□□ -1.31
CDH8-213ENST00000584966 ZNF587Q96SQ5 575 aaPredicted RBP6.86□□□□□ -1.31
CDH8-213ENST00000584966 HAUS7Q99871 368 aa6.86□□□□□ -1.31
CDH8-213ENST00000584966 LNPKQ9C0E8 428 aa6.86□□□□□ -1.31
CDH8-213ENST00000584966 BOLA2Q9H3K6 86 aa6.86□□□□□ -1.31
CDH8-213ENST00000584966 MYOZ2Q9NPC6 264 aa6.86□□□□□ -1.31
CDH8-213ENST00000584966 ADARB2Q9NS39 739 aaKnown RBP6.86□□□□□ -1.31
CDH8-213ENST00000584966 HACL1Q9UJ83 578 aa6.86□□□□□ -1.31
CDH8-213ENST00000584966 SUGT1Q9Y2Z0 365 aa6.86□□□□□ -1.31
CDH8-213ENST00000584966 SIPA1L1O43166 1804 aa6.85□□□□□ -1.31
CDH8-213ENST00000584966 TTC41PQ6P2S7 1318 aa6.85□□□□□ -1.31
CDH8-213ENST00000584966 F8W031 263 aaPredicted RBP6.85□□□□□ -1.31
CDH8-213ENST00000584966 FRAT2O75474 233 aaPredicted RBP6.85□□□□□ -1.31
CDH8-213ENST00000584966 DKK1O94907 266 aa6.85□□□□□ -1.31
CDH8-213ENST00000584966 CHGBP05060 677 aa6.85□□□□□ -1.31
CDH8-213ENST00000584966 MMP14P50281 582 aa6.85□□□□□ -1.31
CDH8-213ENST00000584966 HDLBPQ00341 1268 aaKnown RBP6.85□□□□□ -1.31
CDH8-213ENST00000584966 COL9A3Q14050 684 aaPredicted RBP6.85□□□□□ -1.31
CDH8-213ENST00000584966 NBPF9Q3BBW0 867 aa6.85□□□□□ -1.31
CDH8-213ENST00000584966 APOBEC3HQ6NTF7 200 aaKnown RBP6.85□□□□□ -1.31
CDH8-213ENST00000584966 C8orf86Q6ZUL3 223 aa6.85□□□□□ -1.31
CDH8-213ENST00000584966 USP50Q70EL3 339 aaPredicted RBP6.85□□□□□ -1.31
CDH8-213ENST00000584966 SKAP1Q86WV1 359 aa6.85□□□□□ -1.31
CDH8-213ENST00000584966 TRIM50Q86XT4 487 aa6.85□□□□□ -1.31
CDH8-213ENST00000584966 OGFOD1Q8N543 542 aa6.85□□□□□ -1.31
CDH8-213ENST00000584966 NSUN4Q96CB9 384 aaKnown RBP6.85□□□□□ -1.31
CDH8-213ENST00000584966 PRMT6Q96LA8 375 aaPredicted RBP6.85□□□□□ -1.31
CDH8-213ENST00000584966 ETNK1Q9HBU6 452 aa6.85□□□□□ -1.31
CDH8-213ENST00000584966 ECHDC1Q9NTX5 307 aa6.85□□□□□ -1.31
CDH8-213ENST00000584966 PPP4R2Q9NY27 417 aa6.85□□□□□ -1.31
CDH8-213ENST00000584966 TTF2Q9UNY4 1162 aaKnown RBP6.85□□□□□ -1.31
CDH8-213ENST00000584966 GAKO14976 1311 aa6.84□□□□□ -1.31
CDH8-213ENST00000584966 TCRBV5S4A2TA0A5A2 114 aa6.84□□□□□ -1.31
CDH8-213ENST00000584966 IQCA1LA6NCM1 817 aa6.84□□□□□ -1.31
CDH8-213ENST00000584966 H7C1D1 291 aa6.84□□□□□ -1.31
CDH8-213ENST00000584966 WNT10BO00744 389 aa6.84□□□□□ -1.31
CDH8-213ENST00000584966 LDHBP07195 334 aaKnown RBP6.84□□□□□ -1.31
CDH8-213ENST00000584966 NEFLP07196 543 aa6.84□□□□□ -1.31
CDH8-213ENST00000584966 MX1P20591 662 aa6.84□□□□□ -1.31
CDH8-213ENST00000584966 CRKP46108 304 aa6.84□□□□□ -1.31
CDH8-213ENST00000584966 MECOMQ03112 1051 aa6.84□□□□□ -1.31
CDH8-213ENST00000584966 DPYDQ12882 1025 aa6.84□□□□□ -1.31
CDH8-213ENST00000584966 SWI5Q1ZZU3 235 aa6.84□□□□□ -1.31
CDH8-213ENST00000584966 CFAP100Q494V2 611 aa6.84□□□□□ -1.31
CDH8-213ENST00000584966 TBC1D10BQ4KMP7 808 aaPredicted RBP6.84□□□□□ -1.31
CDH8-213ENST00000584966 HHIPL2Q6UWX4 724 aa6.84□□□□□ -1.31
CDH8-213ENST00000584966 CENPQQ7L2Z9 268 aaPredicted RBP6.84□□□□□ -1.31
CDH8-213ENST00000584966 ADGRA1Q86SQ6 560 aa6.84□□□□□ -1.31
CDH8-213ENST00000584966 C1orf216Q8TAB5 229 aa6.84□□□□□ -1.31
CDH8-213ENST00000584966 ZDHHC15Q96MV8 337 aa6.84□□□□□ -1.31
CDH8-213ENST00000584966 BCL11AQ9H165 835 aa6.84□□□□□ -1.31
CDH8-213ENST00000584966 MARK1Q9P0L2 795 aa6.84□□□□□ -1.31
CDH8-213ENST00000584966 DOLKQ9UPQ8 538 aa6.84□□□□□ -1.31
CDH8-213ENST00000584966 NOD1Q9Y239 953 aa6.84□□□□□ -1.31
CDH8-213ENST00000584966 PAPPA2Q9BXP8 1791 aa6.84□□□□□ -1.31
CDH8-213ENST00000584966 DDX60LQ5H9U9 1706 aaKnown RBP6.84□□□□□ -1.31
CDH8-213ENST00000584966 MYH8P13535 1937 aa6.84□□□□□ -1.32
CDH8-213ENST00000584966 NAV1Q8NEY1 1877 aa6.83□□□□□ -1.32
CDH8-213ENST00000584966 GPR75-ASB3A0A0A6YYF3 556 aa6.83□□□□□ -1.32
CDH8-213ENST00000584966 GOLIM4O00461 696 aa6.83□□□□□ -1.32
CDH8-213ENST00000584966 PAX4O43316 350 aa6.83□□□□□ -1.32
CDH8-213ENST00000584966 IGSF3O75054 1194 aa6.83□□□□□ -1.32
CDH8-213ENST00000584966 GLRX3O76003 335 aaKnown RBP6.83□□□□□ -1.32
CDH8-213ENST00000584966 MAP4K4O95819 1239 aaPredicted RBP6.83□□□□□ -1.32
CDH8-213ENST00000584966 ATP1A2P50993 1020 aa6.83□□□□□ -1.32
CDH8-213ENST00000584966 KIF4BQ2VIQ3 1234 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms