RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 PGRP06401 933 aa2.62□□□□□ -1.99
SMCHD1-211ENST00000584897 FANCCQ00597 558 aa2.62□□□□□ -1.99
SMCHD1-211ENST00000584897 TARBP2Q15633 366 aaKnown RBP2.62□□□□□ -1.99
SMCHD1-211ENST00000584897 CCDC85BQ15834 202 aaPredicted RBP2.62□□□□□ -1.99
SMCHD1-211ENST00000584897 SYDE1Q6ZW31 735 aaPredicted RBP2.62□□□□□ -1.99
SMCHD1-211ENST00000584897 SP8Q8IXZ3 490 aa2.62□□□□□ -1.99
SMCHD1-211ENST00000584897 PDZD8Q8NEN9 1154 aa2.62□□□□□ -1.99
SMCHD1-211ENST00000584897 CCDC74BQ96LY2 380 aa2.62□□□□□ -1.99
SMCHD1-211ENST00000584897 SIRT5Q9NXA8 310 aa2.62□□□□□ -1.99
SMCHD1-211ENST00000584897 PEAK1Q9H792 1746 aa2.62□□□□□ -1.99
SMCHD1-211ENST00000584897 TTBK1Q5TCY1 1321 aaPredicted RBP2.62□□□□□ -1.99
SMCHD1-211ENST00000584897 DHX29Q7Z478 1369 aaKnown RBP2.62□□□□□ -1.99
SMCHD1-211ENST00000584897 U2SURPO15042 1029 aaKnown RBP2.62□□□□□ -1.99
SMCHD1-211ENST00000584897 PEX10O60683 326 aa2.62□□□□□ -1.99
SMCHD1-211ENST00000584897 C8AP07357 584 aa2.62□□□□□ -1.99
SMCHD1-211ENST00000584897 PFKLP17858 780 aa2.62□□□□□ -1.99
SMCHD1-211ENST00000584897 GRIA4P48058 902 aa2.62□□□□□ -1.99
SMCHD1-211ENST00000584897 PCBP3P57721 371 aaKnown RBP2.62□□□□□ -1.99
SMCHD1-211ENST00000584897 HDLBPQ00341 1268 aaKnown RBP2.62□□□□□ -1.99
SMCHD1-211ENST00000584897 GALNT18Q6P9A2 607 aa2.62□□□□□ -1.99
SMCHD1-211ENST00000584897 GPBAR1Q8TDU6 330 aa2.62□□□□□ -1.99
SMCHD1-211ENST00000584897 RELTQ969Z4 430 aa2.62□□□□□ -1.99
SMCHD1-211ENST00000584897 SETDB2Q96T68 719 aa2.62□□□□□ -1.99
SMCHD1-211ENST00000584897 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP2.62□□□□□ -1.993e-7■■■■□ 21.5
SMCHD1-211ENST00000584897 TRPM2O94759 1503 aa2.62□□□□□ -1.99
SMCHD1-211ENST00000584897 PAPPAQ13219 1627 aa2.62□□□□□ -1.99
SMCHD1-211ENST00000584897 RRBP1Q9P2E9 1410 aaKnown RBP2.62□□□□□ -1.99
SMCHD1-211ENST00000584897 STK10O94804 968 aaKnown RBP2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 PDE6BP35913 854 aa2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 ST13P50502 369 aaKnown RBP2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 BBS9Q3SYG4 887 aa2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 ARMCX6Q7L4S7 300 aa2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 CREG2Q8IUH2 290 aa2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 ISL2Q96A47 359 aa2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 DNAJC2Q99543 621 aaKnown RBP2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 DUSP23Q9BVJ7 150 aa2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 ABCB6Q9NP58 842 aa2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 KCNQ5Q9NR82 932 aa2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 DISC1Q9NRI5 854 aa2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 PITPNM2Q9BZ72 1349 aa2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 CRYBG1Q9Y4K1 1723 aa2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 OR14I1A6ND48 311 aa2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 WTIPA6NIX2 430 aaPredicted RBP2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 HRKO00198 91 aa2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 HCLS1P14317 486 aaPredicted RBP2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 ZNF76P36508 570 aa2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 ZBTB37Q5TC79 503 aa2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 CWF19L1Q69YN2 538 aaKnown RBP2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 TTBK2Q6IQ55 1244 aa2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 TPTE2Q6XPS3 522 aa2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 CRACR2BQ8N4Y2 399 aaPredicted RBP2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 ZMYM5Q9UJ78 669 aa2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 INPP5FQ9Y2H2 1132 aa2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 CLSPNQ9HAW4 1339 aa2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 THSD7BQ9C0I4 1608 aa2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 KIF1AQ12756 1690 aa2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 A6NHS1 94 aa2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 CCNFP41002 786 aa2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 OXCT1P55809 520 aa2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 TAF7LQ5H9L4 462 aa2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 SNAP47Q5SQN1 464 aa2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 OGFOD2Q6N063 350 aa2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 RNF141Q8WVD5 230 aa2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 SMARCC1Q92922 1105 aaPredicted RBP2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 ZC3H12CQ9C0D7 883 aaKnown RBP2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 CARS2Q9HA77 564 aaKnown RBP2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 NGRNQ9NPE2 291 aaKnown RBP2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 FAM105AQ9NUU6 356 aa2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 PRR13Q9NZ81 148 aa2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 SLC12A7Q9Y666 1083 aa2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 AK5Q9Y6K8 562 aa2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 HFM1A2PYH4 1435 aa2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 NRXN3Q9Y4C0 1643 aa2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 CYP7B1O75881 506 aa2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 TSPAN15O95858 294 aa2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 MPOP05164 745 aa2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 PLCG1P19174 1290 aa2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 DAB2P98082 770 aa2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 NR1I3Q14994 352 aa2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 TAF1CQ15572 869 aaPredicted RBP2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 FBLN7Q53RD9 439 aa2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 TCERG1LQ5VWI1 586 aa2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 LETMD1Q6P1Q0 360 aa2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 USP51Q70EK9 711 aa2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 CBLL1Q75N03 491 aa2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 FAM13CQ8NE31 585 aa2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 CCDC136Q96JN2 1154 aa2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 CFDP1Q9UEE9 299 aaPredicted RBP2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 NUDT5Q9UKK9 219 aa2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 NUB1Q9Y5A7 615 aa2.61□□□□□ -1.99
SMCHD1-211ENST00000584897 TRBV23OR9-2A0A075B6M9 112 aa2.6□□□□□ -1.99
SMCHD1-211ENST00000584897 CBX7O95931 251 aa2.6□□□□□ -1.99
SMCHD1-211ENST00000584897 USP17L7P0C7H9 530 aa2.6□□□□□ -1.99
SMCHD1-211ENST00000584897 CD8BP10966 210 aa2.6□□□□□ -1.99
SMCHD1-211ENST00000584897 HMGB2P26583 209 aaKnown RBP2.6□□□□□ -1.99
SMCHD1-211ENST00000584897 ANAPC15P60006 121 aa2.6□□□□□ -1.99
SMCHD1-211ENST00000584897 RPL6Q02878 288 aaKnown RBP2.6□□□□□ -1.99
SMCHD1-211ENST00000584897 CWF19L2Q2TBE0 894 aaKnown RBP2.6□□□□□ -1.99
SMCHD1-211ENST00000584897 SOGA3Q5TF21 947 aa2.6□□□□□ -1.99
SMCHD1-211ENST00000584897 PCNX4Q63HM2 1172 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms