RNA–Protein interactions for RNA: ENST00000584525.5

CDK5RAP3-234, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 530 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-234ENST00000584525 RAVER2Q9HCJ3 691 aaKnown RBP15.57■□□□□ 0.08
CDK5RAP3-234ENST00000584525 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.57■□□□□ 0.08
CDK5RAP3-234ENST00000584525 ELP1O95163 1332 aa15.57■□□□□ 0.08
CDK5RAP3-234ENST00000584525 SALL3Q9BXA9 1300 aa15.57■□□□□ 0.08
CDK5RAP3-234ENST00000584525 RLFQ13129 1914 aa15.56■□□□□ 0.08
CDK5RAP3-234ENST00000584525 CDH23Q9H251 3354 aa15.56■□□□□ 0.08
CDK5RAP3-234ENST00000584525 ASGR1P07306 291 aa15.56■□□□□ 0.08
CDK5RAP3-234ENST00000584525 TDO2P48775 406 aa15.56■□□□□ 0.08
CDK5RAP3-234ENST00000584525 IRX5P78411 483 aaPredicted RBP15.56■□□□□ 0.08
CDK5RAP3-234ENST00000584525 PPIGQ13427 754 aaKnown RBP eCLIP15.56■□□□□ 0.083e-14■■■■■ 29.6
CDK5RAP3-234ENST00000584525 MFSD5Q6N075 450 aa15.56■□□□□ 0.08
CDK5RAP3-234ENST00000584525 CCDC129Q6ZRS4 1044 aa15.56■□□□□ 0.08
CDK5RAP3-234ENST00000584525 CENPQQ7L2Z9 268 aaPredicted RBP15.56■□□□□ 0.08
CDK5RAP3-234ENST00000584525 ZNF467Q7Z7K2 595 aaPredicted RBP15.56■□□□□ 0.08
CDK5RAP3-234ENST00000584525 ZNF444Q8N0Y2 327 aaPredicted RBP15.56■□□□□ 0.08
CDK5RAP3-234ENST00000584525 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.56■□□□□ 0.089e-16■□□□□ 8.9
CDK5RAP3-234ENST00000584525 NACAP1Q9BZK3 213 aa15.56■□□□□ 0.08
CDK5RAP3-234ENST00000584525 PRDM6Q9NQX0 595 aa15.56■□□□□ 0.08
CDK5RAP3-234ENST00000584525 TBX21Q9UL17 535 aa15.56■□□□□ 0.08
CDK5RAP3-234ENST00000584525 MROH7Q68CQ1 1323 aa15.56■□□□□ 0.08
CDK5RAP3-234ENST00000584525 GSG1L2A8MUP6 293 aa15.55■□□□□ 0.08
CDK5RAP3-234ENST00000584525 ATP2A1O14983 1001 aa15.55■□□□□ 0.08
CDK5RAP3-234ENST00000584525 GPAA1O43292 621 aa15.55■□□□□ 0.08
CDK5RAP3-234ENST00000584525 CST5P28325 142 aaPredicted RBP15.55■□□□□ 0.08
CDK5RAP3-234ENST00000584525 CDK7P50613 346 aa15.55■□□□□ 0.08
CDK5RAP3-234ENST00000584525 CCDC144BQ3MJ40 725 aa15.55■□□□□ 0.08
CDK5RAP3-234ENST00000584525 GNASQ5JWF2 1037 aa15.55■□□□□ 0.08
CDK5RAP3-234ENST00000584525 GIMAP6Q6P9H5 292 aa15.55■□□□□ 0.08
CDK5RAP3-234ENST00000584525 PLEKHM2Q8IWE5 1019 aa15.55■□□□□ 0.08
CDK5RAP3-234ENST00000584525 ABHD16BQ9H3Z7 469 aa15.55■□□□□ 0.08
CDK5RAP3-234ENST00000584525 SLC38A10Q9HBR0 1119 aa15.55■□□□□ 0.08
CDK5RAP3-234ENST00000584525 DIAPH3Q9NSV4 1193 aa15.55■□□□□ 0.08
CDK5RAP3-234ENST00000584525 FBXO40Q9UH90 709 aa15.55■□□□□ 0.08
CDK5RAP3-234ENST00000584525 FEM1BQ9UK73 627 aa15.55■□□□□ 0.08
CDK5RAP3-234ENST00000584525 A0A0U1RQG5 324 aaPredicted RBP15.54■□□□□ 0.08
CDK5RAP3-234ENST00000584525 ARVCFO00192 962 aa15.54■□□□□ 0.08
CDK5RAP3-234ENST00000584525 HIP1O00291 1037 aa15.54■□□□□ 0.08
CDK5RAP3-234ENST00000584525 ADCY6O43306 1168 aa15.54■□□□□ 0.08
CDK5RAP3-234ENST00000584525 PRDM1O75626 825 aa15.54■□□□□ 0.08
CDK5RAP3-234ENST00000584525 CSF2RAP15509 400 aa15.54■□□□□ 0.08
CDK5RAP3-234ENST00000584525 MFAP1P55081 439 aaKnown RBP15.54■□□□□ 0.08
CDK5RAP3-234ENST00000584525 GJA9P57773 515 aa15.54■□□□□ 0.08
CDK5RAP3-234ENST00000584525 TMEM240Q5SV17 173 aa15.54■□□□□ 0.08
CDK5RAP3-234ENST00000584525 NOL8Q76FK4 1167 aaKnown RBP15.54■□□□□ 0.08
CDK5RAP3-234ENST00000584525 TMEM199Q8N511 208 aa15.54■□□□□ 0.08
CDK5RAP3-234ENST00000584525 USP38Q8NB14 1042 aa15.54■□□□□ 0.08
CDK5RAP3-234ENST00000584525 CHST13Q8NET6 341 aa15.54■□□□□ 0.08
CDK5RAP3-234ENST00000584525 PPM1EQ8WY54 764 aa15.54■□□□□ 0.08
CDK5RAP3-234ENST00000584525 OSBP2Q969R2 916 aa15.54■□□□□ 0.08
CDK5RAP3-234ENST00000584525 CEP95Q96GE4 821 aa15.54■□□□□ 0.08
CDK5RAP3-234ENST00000584525 OSBPL3Q9H4L5 887 aa15.54■□□□□ 0.08
CDK5RAP3-234ENST00000584525 ZNF287Q9HBT7 754 aa15.54■□□□□ 0.08
CDK5RAP3-234ENST00000584525 HOMER2Q9NSB8 354 aa15.54■□□□□ 0.08
CDK5RAP3-234ENST00000584525 ISY1Q9ULR0 285 aaKnown RBP15.54■□□□□ 0.08
CDK5RAP3-234ENST00000584525 PRUNE2Q8WUY3 3088 aa15.53■□□□□ 0.08
CDK5RAP3-234ENST00000584525 IGKV6D-41A0A0C4DH26 115 aa15.53■□□□□ 0.08
CDK5RAP3-234ENST00000584525 GRXCR1A8MXD5 290 aa15.53■□□□□ 0.08
CDK5RAP3-234ENST00000584525 TLR3O15455 904 aaKnown RBP15.53■□□□□ 0.08
CDK5RAP3-234ENST00000584525 ACRP10323 421 aa15.53■□□□□ 0.08
CDK5RAP3-234ENST00000584525 PBX2P40425 430 aa15.53■□□□□ 0.08
CDK5RAP3-234ENST00000584525 TJAP1Q5JTD0 557 aa15.53■□□□□ 0.08
CDK5RAP3-234ENST00000584525 C16orf59Q7L2K0 433 aa15.53■□□□□ 0.08
CDK5RAP3-234ENST00000584525 ARMCX2Q7L311 632 aa15.53■□□□□ 0.08
CDK5RAP3-234ENST00000584525 LRRC47Q8N1G4 583 aaKnown RBP15.53■□□□□ 0.08
CDK5RAP3-234ENST00000584525 MKL1Q969V6 931 aa15.53■□□□□ 0.08
CDK5RAP3-234ENST00000584525 PPP1R12CQ9BZL4 782 aa15.53■□□□□ 0.08
CDK5RAP3-234ENST00000584525 NAPBQ9H115 298 aa15.53■□□□□ 0.08
CDK5RAP3-234ENST00000584525 UPF3AQ9H1J1 476 aaKnown RBP15.53■□□□□ 0.08
CDK5RAP3-234ENST00000584525 MTMR4Q9NYA4 1195 aa15.53■□□□□ 0.08
CDK5RAP3-234ENST00000584525 M0R2C6 588 aa15.52■□□□□ 0.08
CDK5RAP3-234ENST00000584525 TTLL1O95922 423 aa15.52■□□□□ 0.08
CDK5RAP3-234ENST00000584525 SLC3A2P08195 630 aaKnown RBP15.52■□□□□ 0.08
CDK5RAP3-234ENST00000584525 OAZ1P54368 228 aa15.52■□□□□ 0.08
CDK5RAP3-234ENST00000584525 ZMYM1Q5SVZ6 1142 aa15.52■□□□□ 0.08
CDK5RAP3-234ENST00000584525 SLFN13Q68D06 897 aa15.52■□□□□ 0.08
CDK5RAP3-234ENST00000584525 ZNF365Q70YC5 407 aa15.52■□□□□ 0.08
CDK5RAP3-234ENST00000584525 TICAM2Q86XR7 235 aa15.52■□□□□ 0.08
CDK5RAP3-234ENST00000584525 CCDC144CPQ8IYA2 1237 aa15.52■□□□□ 0.08
CDK5RAP3-234ENST00000584525 FGD4Q96M96 766 aa15.52■□□□□ 0.08
CDK5RAP3-234ENST00000584525 GAS2L1Q99501 681 aaPredicted RBP15.52■□□□□ 0.08
CDK5RAP3-234ENST00000584525 PBX4Q9BYU1 374 aa15.52■□□□□ 0.08
CDK5RAP3-234ENST00000584525 HELLSQ9NRZ9 838 aa15.52■□□□□ 0.08
CDK5RAP3-234ENST00000584525 MYH8P13535 1937 aa15.51■□□□□ 0.07
CDK5RAP3-234ENST00000584525 BMP3P12645 472 aa15.51■□□□□ 0.07
CDK5RAP3-234ENST00000584525 BEX3Q00994 111 aa15.51■□□□□ 0.07
CDK5RAP3-234ENST00000584525 CNTN2Q02246 1040 aa15.51■□□□□ 0.07
CDK5RAP3-234ENST00000584525 TNFAIP2Q03169 654 aa15.51■□□□□ 0.07
CDK5RAP3-234ENST00000584525 PSRC1Q6PGN9 363 aaPredicted RBP15.51■□□□□ 0.07
CDK5RAP3-234ENST00000584525 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.51■□□□□ 0.07
CDK5RAP3-234ENST00000584525 FAM126BQ8IXS8 530 aa15.51■□□□□ 0.07
CDK5RAP3-234ENST00000584525 GMCL1P1Q8NEA9 526 aa15.51■□□□□ 0.07
CDK5RAP3-234ENST00000584525 CHMP4CQ96CF2 233 aa15.51■□□□□ 0.07
CDK5RAP3-234ENST00000584525 SEC62Q99442 399 aaKnown RBP15.51■□□□□ 0.07
CDK5RAP3-234ENST00000584525 PRDM12Q9H4Q4 367 aa15.51■□□□□ 0.07
CDK5RAP3-234ENST00000584525 EPB41L4AQ9HCS5 686 aaPredicted RBP15.51■□□□□ 0.07
CDK5RAP3-234ENST00000584525 BAZ2AQ9UIF9 1905 aaKnown RBP15.51■□□□□ 0.07
CDK5RAP3-234ENST00000584525 PATL2C9JE40 543 aaKnown RBP15.5■□□□□ 0.07
CDK5RAP3-234ENST00000584525 TMEM232C9JQI7 657 aa15.5■□□□□ 0.07
CDK5RAP3-234ENST00000584525 TSPY3P0CV98 308 aa15.5■□□□□ 0.07
CDK5RAP3-234ENST00000584525 TSPY8P0CW00 308 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms