RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 TUBGCP2Q9BSJ2 902 aa14.28□□□□□ -0.12
RNF43-208ENST00000584437 ANKRD35Q8N283 1001 aa14.28□□□□□ -0.12
RNF43-208ENST00000584437 FBXO41Q8TF61 875 aa14.28□□□□□ -0.12
RNF43-208ENST00000584437 TCP11Q8WWU5 503 aa14.28□□□□□ -0.12
RNF43-208ENST00000584437 MAP4K1Q92918 833 aa14.28□□□□□ -0.12
RNF43-208ENST00000584437 ZSCAN10Q96SZ4 725 aaPredicted RBP14.28□□□□□ -0.12
RNF43-208ENST00000584437 USP44Q9H0E7 712 aa14.28□□□□□ -0.12
RNF43-208ENST00000584437 JAG2Q9Y219 1238 aa14.28□□□□□ -0.12
RNF43-208ENST00000584437 NDUFB9Q9Y6M9 179 aa14.28□□□□□ -0.12
RNF43-208ENST00000584437 LMNB1P20700 586 aa14.28□□□□□ -0.12
RNF43-208ENST00000584437 SERPINB6P35237 376 aa14.28□□□□□ -0.12
RNF43-208ENST00000584437 PRR16Q569H4 304 aa14.28□□□□□ -0.12
RNF43-208ENST00000584437 TTC19Q6DKK2 380 aaPredicted RBP14.28□□□□□ -0.12
RNF43-208ENST00000584437 DHTKD1Q96HY7 919 aaPredicted RBP14.28□□□□□ -0.12
RNF43-208ENST00000584437 TXLNGQ9NUQ3 528 aa14.28□□□□□ -0.12
RNF43-208ENST00000584437 PANK4Q9NVE7 773 aa14.28□□□□□ -0.12
RNF43-208ENST00000584437 RPSAP08865 295 aaKnown RBP14.28□□□□□ -0.12
RNF43-208ENST00000584437 KRT3P12035 628 aa14.28□□□□□ -0.12
RNF43-208ENST00000584437 ADD1P35611 737 aaKnown RBP14.28□□□□□ -0.12
RNF43-208ENST00000584437 PDE6CP51160 858 aa14.28□□□□□ -0.12
RNF43-208ENST00000584437 ARHGEF18Q6ZSZ5 1173 aa14.28□□□□□ -0.12
RNF43-208ENST00000584437 hCG_1642624A0A1W2PR95 340 aa14.27□□□□□ -0.12
RNF43-208ENST00000584437 EIF6P56537 245 aaKnown RBP14.27□□□□□ -0.12
RNF43-208ENST00000584437 CNOT6LQ96LI5 555 aaKnown RBP14.27□□□□□ -0.12
RNF43-208ENST00000584437 CLIC6Q96NY7 704 aa14.27□□□□□ -0.12
RNF43-208ENST00000584437 EPB41L5Q9HCM4 733 aa14.27□□□□□ -0.12
RNF43-208ENST00000584437 SCOCQ9UIL1 159 aa14.27□□□□□ -0.12
RNF43-208ENST00000584437 DAAM1Q9Y4D1 1078 aa14.27□□□□□ -0.12
RNF43-208ENST00000584437 BTBD18B2RXH4 712 aa14.27□□□□□ -0.12
RNF43-208ENST00000584437 SCG2P13521 617 aa14.27□□□□□ -0.12
RNF43-208ENST00000584437 TNNI1P19237 187 aa14.27□□□□□ -0.12
RNF43-208ENST00000584437 TRAPPC10P48553 1259 aa14.27□□□□□ -0.12
RNF43-208ENST00000584437 FAM26FQ5R3K3 315 aa14.27□□□□□ -0.12
RNF43-208ENST00000584437 MAEAQ7L5Y9 396 aa14.27□□□□□ -0.12
RNF43-208ENST00000584437 NEK8Q86SG6 692 aa14.27□□□□□ -0.12
RNF43-208ENST00000584437 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.27□□□□□ -0.12
RNF43-208ENST00000584437 WHAMMQ8TF30 809 aa14.27□□□□□ -0.12
RNF43-208ENST00000584437 SYMPKQ92797 1274 aaKnown RBP14.27□□□□□ -0.12
RNF43-208ENST00000584437 MIS12Q9H081 205 aa14.27□□□□□ -0.12
RNF43-208ENST00000584437 HSPA6P17066 643 aa14.27□□□□□ -0.13
RNF43-208ENST00000584437 RASSF7Q02833 373 aa14.27□□□□□ -0.13
RNF43-208ENST00000584437 SLFN12Q8IYM2 578 aa14.27□□□□□ -0.13
RNF43-208ENST00000584437 ARHGEF10O15013 1369 aa14.27□□□□□ -0.13
RNF43-208ENST00000584437 DDAH1O94760 285 aa14.27□□□□□ -0.13
RNF43-208ENST00000584437 VPS41P49754 854 aa14.27□□□□□ -0.13
RNF43-208ENST00000584437 E2F5Q15329 346 aa14.27□□□□□ -0.13
RNF43-208ENST00000584437 TERF2Q15554 542 aa14.27□□□□□ -0.13
RNF43-208ENST00000584437 FOXP1Q9H334 677 aaPredicted RBP14.27□□□□□ -0.13
RNF43-208ENST00000584437 RCOR1Q9UKL0 485 aa14.27□□□□□ -0.13
RNF43-208ENST00000584437 MED23Q9ULK4 1368 aa14.27□□□□□ -0.13
RNF43-208ENST00000584437 PGRMC1O00264 195 aaKnown RBP14.26□□□□□ -0.13
RNF43-208ENST00000584437 LAD1O00515 517 aa14.26□□□□□ -0.13
RNF43-208ENST00000584437 SKIP12755 728 aa14.26□□□□□ -0.13
RNF43-208ENST00000584437 IFNAR2P48551 515 aa14.26□□□□□ -0.13
RNF43-208ENST00000584437 CYP2J2P51589 502 aa14.26□□□□□ -0.13
RNF43-208ENST00000584437 RBL2Q08999 1139 aa14.26□□□□□ -0.13
RNF43-208ENST00000584437 SCRN1Q12765 414 aa14.26□□□□□ -0.13
RNF43-208ENST00000584437 ADAM9Q13443 819 aa14.26□□□□□ -0.13
RNF43-208ENST00000584437 DPCR1Q3MIW9 517 aa14.26□□□□□ -0.13
RNF43-208ENST00000584437 C11orf57Q6ZUT1 292 aaPredicted RBP14.26□□□□□ -0.13
RNF43-208ENST00000584437 UHMK1Q8TAS1 419 aaKnown RBP14.26□□□□□ -0.13
RNF43-208ENST00000584437 SLC52A2Q9HAB3 445 aa14.26□□□□□ -0.13
RNF43-208ENST00000584437 COL4A3BPQ9Y5P4 624 aa14.26□□□□□ -0.13
RNF43-208ENST00000584437 RIMBP2O15034 1052 aa14.26□□□□□ -0.13
RNF43-208ENST00000584437 PNMA6AP0CW24 399 aaPredicted RBP14.26□□□□□ -0.13
RNF43-208ENST00000584437 MAGEA9P43362 315 aa14.26□□□□□ -0.13
RNF43-208ENST00000584437 EIF4A1P60842 406 aaKnown RBP14.26□□□□□ -0.13
RNF43-208ENST00000584437 BFSP1Q12934 665 aa14.26□□□□□ -0.13
RNF43-208ENST00000584437 EIF3CLB5ME19 914 aaKnown RBP14.26□□□□□ -0.13
RNF43-208ENST00000584437 ENC1O14682 589 aa14.26□□□□□ -0.13
RNF43-208ENST00000584437 CTNND1O60716 968 aaKnown RBP14.26□□□□□ -0.13
RNF43-208ENST00000584437 HOXA7P31268 230 aaPredicted RBP14.26□□□□□ -0.13
RNF43-208ENST00000584437 NNTQ13423 1086 aa14.26□□□□□ -0.13
RNF43-208ENST00000584437 SLMAPQ14BN4 828 aa14.26□□□□□ -0.13
RNF43-208ENST00000584437 CCHCR1Q8TD31 782 aa14.26□□□□□ -0.13
RNF43-208ENST00000584437 EAF2Q96CJ1 260 aaPredicted RBP14.26□□□□□ -0.13
RNF43-208ENST00000584437 EIF3CQ99613 913 aaKnown RBP14.26□□□□□ -0.13
RNF43-208ENST00000584437 C1orf112Q9NSG2 853 aa14.26□□□□□ -0.13
RNF43-208ENST00000584437 PCDHA12Q9UN75 941 aa14.26□□□□□ -0.13
RNF43-208ENST00000584437 KDM5DQ9BY66 1539 aa14.26□□□□□ -0.13
RNF43-208ENST00000584437 ZNF518AQ6AHZ1 1483 aa14.26□□□□□ -0.13
RNF43-208ENST00000584437 KDRP35968 1356 aa14.26□□□□□ -0.13
RNF43-208ENST00000584437 NEURL1BA8MQ27 555 aa14.26□□□□□ -0.13
RNF43-208ENST00000584437 UFL1O94874 794 aa14.26□□□□□ -0.13
RNF43-208ENST00000584437 PCP11498 1178 aaKnown RBP14.26□□□□□ -0.13
RNF43-208ENST00000584437 GARSP41250 739 aaKnown RBP14.26□□□□□ -0.13
RNF43-208ENST00000584437 TECP42680 631 aa14.26□□□□□ -0.13
RNF43-208ENST00000584437 EIF3BP55884 814 aaKnown RBP14.26□□□□□ -0.13
RNF43-208ENST00000584437 CASP8Q14790 479 aa14.26□□□□□ -0.13
RNF43-208ENST00000584437 EXOC3L4Q17RC7 722 aa14.26□□□□□ -0.13
RNF43-208ENST00000584437 ANKRD20A4Q4UJ75 823 aa14.26□□□□□ -0.13
RNF43-208ENST00000584437 ANKRD20A8PQ5CZ79 823 aa14.26□□□□□ -0.13
RNF43-208ENST00000584437 ANKRD20A2Q5SQ80 823 aa14.26□□□□□ -0.13
RNF43-208ENST00000584437 ANKRD20A1Q5TYW2 823 aa14.26□□□□□ -0.13
RNF43-208ENST00000584437 NXNQ6DKJ4 435 aa14.26□□□□□ -0.13
RNF43-208ENST00000584437 IFNL3Q8IZI9 196 aa14.26□□□□□ -0.13
RNF43-208ENST00000584437 MAGOHBQ96A72 148 aaKnown RBP14.26□□□□□ -0.13
RNF43-208ENST00000584437 SDCCAG3Q96C92 435 aa14.26□□□□□ -0.13
RNF43-208ENST00000584437 BIN2Q9UBW5 565 aaPredicted RBP14.26□□□□□ -0.13
RNF43-208ENST00000584437 ATP10BO94823 1461 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms