RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 PLS1Q14651 629 aa12.68□□□□□ -0.38
TOP3A-216ENST00000583804 SLC35G1Q2M3R5 365 aa12.68□□□□□ -0.38
TOP3A-216ENST00000583804 CPXCR1Q8N123 301 aa12.68□□□□□ -0.38
TOP3A-216ENST00000583804 RRP36Q96EU6 259 aaKnown RBP12.68□□□□□ -0.38
TOP3A-216ENST00000583804 PIGSQ96S52 555 aa12.68□□□□□ -0.38
TOP3A-216ENST00000583804 BEGAINQ9BUH8 593 aa12.68□□□□□ -0.38
TOP3A-216ENST00000583804 SPZ1Q9BXG8 430 aa12.68□□□□□ -0.38
TOP3A-216ENST00000583804 RNF186Q9NXI6 227 aa12.68□□□□□ -0.38
TOP3A-216ENST00000583804 V9GY48 417 aaPredicted RBP12.68□□□□□ -0.38
TOP3A-216ENST00000583804 PEX10O60683 326 aa12.67□□□□□ -0.38
TOP3A-216ENST00000583804 FDX1P10109 184 aa12.67□□□□□ -0.38
TOP3A-216ENST00000583804 IFNAR1P17181 557 aa12.67□□□□□ -0.38
TOP3A-216ENST00000583804 MAP2K1Q02750 393 aaPredicted RBP12.67□□□□□ -0.38
TOP3A-216ENST00000583804 SSRP1Q08945 709 aaKnown RBP12.67□□□□□ -0.38
TOP3A-216ENST00000583804 NTRK3Q16288 839 aa12.67□□□□□ -0.38
TOP3A-216ENST00000583804 CDC37Q16543 378 aaPredicted RBP12.67□□□□□ -0.38
TOP3A-216ENST00000583804 LBX2Q6XYB7 198 aa12.67□□□□□ -0.38
TOP3A-216ENST00000583804 TRIM22Q8IYM9 498 aa12.67□□□□□ -0.38
TOP3A-216ENST00000583804 ANKRD13CQ8N6S4 541 aa12.67□□□□□ -0.38
TOP3A-216ENST00000583804 NSUN7Q8NE18 718 aaKnown RBP12.67□□□□□ -0.38
TOP3A-216ENST00000583804 GTF3C2Q8WUA4 911 aaPredicted RBP12.67□□□□□ -0.38
TOP3A-216ENST00000583804 SLC26A6Q9BXS9 759 aa12.67□□□□□ -0.38
TOP3A-216ENST00000583804 RANBP17Q9H2T7 1088 aaKnown RBP12.67□□□□□ -0.38
TOP3A-216ENST00000583804 SLC38A10Q9HBR0 1119 aa12.67□□□□□ -0.38
TOP3A-216ENST00000583804 RAVER2Q9HCJ3 691 aaKnown RBP12.67□□□□□ -0.38
TOP3A-216ENST00000583804 RBPJLQ9UBG7 517 aa12.67□□□□□ -0.38
TOP3A-216ENST00000583804 SEC63Q9UGP8 760 aaKnown RBP12.67□□□□□ -0.38
TOP3A-216ENST00000583804 CPA4Q9UI42 421 aa12.67□□□□□ -0.38
TOP3A-216ENST00000583804 ADAMTS5Q9UNA0 930 aa12.67□□□□□ -0.38
TOP3A-216ENST00000583804 CNTNAP5Q8WYK1 1306 aa12.67□□□□□ -0.38
TOP3A-216ENST00000583804 TLR2O60603 784 aa12.66□□□□□ -0.38
TOP3A-216ENST00000583804 FUT2Q10981 343 aa12.66□□□□□ -0.38
TOP3A-216ENST00000583804 PKP1Q13835 747 aa12.66□□□□□ -0.38
TOP3A-216ENST00000583804 TMEM132BQ14DG7 1078 aa12.66□□□□□ -0.38
TOP3A-216ENST00000583804 QRICH1Q2TAL8 776 aa12.66□□□□□ -0.38
TOP3A-216ENST00000583804 MB21D1Q8N884 522 aa12.66□□□□□ -0.38
TOP3A-216ENST00000583804 TXNRD2Q9NNW7 524 aa12.66□□□□□ -0.38
TOP3A-216ENST00000583804 BTBD7Q9P203 1132 aa12.66□□□□□ -0.38
TOP3A-216ENST00000583804 RABGAP1Q9Y3P9 1069 aa12.66□□□□□ -0.38
TOP3A-216ENST00000583804 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.66□□□□□ -0.38
TOP3A-216ENST00000583804 PNMA6FA0A0J9YX94 578 aa12.65□□□□□ -0.38
TOP3A-216ENST00000583804 ZBTB5O15062 677 aa12.65□□□□□ -0.38
TOP3A-216ENST00000583804 PRPF3O43395 683 aaKnown RBP12.65□□□□□ -0.38
TOP3A-216ENST00000583804 STAT3P40763 770 aa12.65□□□□□ -0.38
TOP3A-216ENST00000583804 NBR1Q14596 966 aa12.65□□□□□ -0.38
TOP3A-216ENST00000583804 USH1GQ495M9 461 aa12.65□□□□□ -0.38
TOP3A-216ENST00000583804 POTEEQ6S8J3 1075 aa12.65□□□□□ -0.38
TOP3A-216ENST00000583804 FBXO11Q86XK2 927 aa12.65□□□□□ -0.38
TOP3A-216ENST00000583804 REPS2Q8NFH8 660 aa12.65□□□□□ -0.38
TOP3A-216ENST00000583804 GPRC5AQ8NFJ5 357 aa12.65□□□□□ -0.38
TOP3A-216ENST00000583804 MTMR8Q96EF0 704 aa12.65□□□□□ -0.38
TOP3A-216ENST00000583804 AGBL1Q96MI9 1066 aa12.65□□□□□ -0.38
TOP3A-216ENST00000583804 AIFM3Q96NN9 605 aa12.65□□□□□ -0.38
TOP3A-216ENST00000583804 LLPHQ9BRT6 129 aaKnown RBP12.65□□□□□ -0.38
TOP3A-216ENST00000583804 SPATC1LQ9H0A9 340 aa12.65□□□□□ -0.38
TOP3A-216ENST00000583804 R3HDMLQ9H3Y0 253 aa12.65□□□□□ -0.38
TOP3A-216ENST00000583804 CCPG1Q9ULG6 757 aa12.65□□□□□ -0.38
TOP3A-216ENST00000583804 CNMDO75829 334 aa12.65□□□□□ -0.38
TOP3A-216ENST00000583804 ECM2O94769 699 aaPredicted RBP12.65□□□□□ -0.38
TOP3A-216ENST00000583804 FMNL1O95466 1100 aaPredicted RBP12.65□□□□□ -0.38
TOP3A-216ENST00000583804 ICAM1P05362 532 aa12.65□□□□□ -0.38
TOP3A-216ENST00000583804 TAL1P17542 331 aaPredicted RBP12.65□□□□□ -0.38
TOP3A-216ENST00000583804 ERVK-9P63128 1117 aa12.65□□□□□ -0.38
TOP3A-216ENST00000583804 ERVK-24P63145 666 aa12.65□□□□□ -0.38
TOP3A-216ENST00000583804 GUCY1B3Q02153 619 aa12.65□□□□□ -0.38
TOP3A-216ENST00000583804 Q3C1V9 767 aa12.65□□□□□ -0.38
TOP3A-216ENST00000583804 SNRNP48Q6IEG0 339 aaKnown RBP12.65□□□□□ -0.38
TOP3A-216ENST00000583804 C17orf99Q6UX52 265 aa12.65□□□□□ -0.38
TOP3A-216ENST00000583804 CCAR1Q8IX12 1150 aaKnown RBP12.65□□□□□ -0.38
TOP3A-216ENST00000583804 FAM184AQ8NB25 1140 aa12.65□□□□□ -0.38
TOP3A-216ENST00000583804 AMNQ9BXJ7 453 aa12.65□□□□□ -0.38
TOP3A-216ENST00000583804 TEX13BQ9BXU2 312 aa12.65□□□□□ -0.38
TOP3A-216ENST00000583804 RNF26Q9BY78 433 aaPredicted RBP12.65□□□□□ -0.38
TOP3A-216ENST00000583804 ORC3Q9UBD5 711 aaPredicted RBP12.65□□□□□ -0.38
TOP3A-216ENST00000583804 ZNF214Q9UL59 606 aaPredicted RBP12.65□□□□□ -0.38
TOP3A-216ENST00000583804 ZNF536O15090 1300 aa12.64□□□□□ -0.39
TOP3A-216ENST00000583804 VPS37CA5D8V6 355 aaPredicted RBP12.64□□□□□ -0.39
TOP3A-216ENST00000583804 ALAS1P13196 640 aa12.64□□□□□ -0.39
TOP3A-216ENST00000583804 OAZ1P54368 228 aa12.64□□□□□ -0.39
TOP3A-216ENST00000583804 CCNA1P78396 465 aa12.64□□□□□ -0.39
TOP3A-216ENST00000583804 WDR78Q5VTH9 848 aa12.64□□□□□ -0.39
TOP3A-216ENST00000583804 HEATR3Q7Z4Q2 680 aa12.64□□□□□ -0.39
TOP3A-216ENST00000583804 NCAPG2Q86XI2 1143 aa12.64□□□□□ -0.39
TOP3A-216ENST00000583804 COA7Q96BR5 231 aa12.64□□□□□ -0.39
TOP3A-216ENST00000583804 INTS4Q96HW7 963 aaKnown RBP12.64□□□□□ -0.39
TOP3A-216ENST00000583804 CWC22Q9HCG8 908 aaKnown RBP12.64□□□□□ -0.39
TOP3A-216ENST00000583804 HOMER2Q9NSB8 354 aa12.64□□□□□ -0.39
TOP3A-216ENST00000583804 GJB4Q9NTQ9 266 aa12.64□□□□□ -0.39
TOP3A-216ENST00000583804 RBM27Q9P2N5 1060 aaKnown RBP12.64□□□□□ -0.39
TOP3A-216ENST00000583804 MORF4L1Q9UBU8 362 aa12.64□□□□□ -0.39
TOP3A-216ENST00000583804 BAZ2BQ9UIF8 2168 aaKnown RBP12.64□□□□□ -0.39
TOP3A-216ENST00000583804 PCDHA1Q9Y5I3 950 aa12.64□□□□□ -0.39
TOP3A-216ENST00000583804 ADGRA2Q96PE1 1338 aa12.63□□□□□ -0.39
TOP3A-216ENST00000583804 RLFQ13129 1914 aa12.63□□□□□ -0.39
TOP3A-216ENST00000583804 ATP2A1O14983 1001 aa12.63□□□□□ -0.39
TOP3A-216ENST00000583804 PPP1R11O60927 126 aaPredicted RBP12.63□□□□□ -0.39
TOP3A-216ENST00000583804 DEXIO95424 95 aa12.63□□□□□ -0.39
TOP3A-216ENST00000583804 BCRP11274 1271 aa12.63□□□□□ -0.39
TOP3A-216ENST00000583804 SCG2P13521 617 aa12.63□□□□□ -0.39
TOP3A-216ENST00000583804 TRAF1Q13077 416 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms