RNA–Protein interactions for RNA: ENST00000583391.1

ERBB2-215, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-215ENST00000583391 GNAQP50148 359 aa15.14■□□□□ 0.01
ERBB2-215ENST00000583391 SNRNP48Q6IEG0 339 aaKnown RBP15.14■□□□□ 0.01
ERBB2-215ENST00000583391 CCDC82Q8N4S0 544 aa15.14■□□□□ 0.01
ERBB2-215ENST00000583391 SRBD1Q8N5C6 995 aaKnown RBP15.14■□□□□ 0.01
ERBB2-215ENST00000583391 GPRC5AQ8NFJ5 357 aa15.14■□□□□ 0.01
ERBB2-215ENST00000583391 ZNF274Q96GC6 653 aaPredicted RBP15.14■□□□□ 0.01
ERBB2-215ENST00000583391 SPATC1LQ9H0A9 340 aa15.14■□□□□ 0.01
ERBB2-215ENST00000583391 JMJD4Q9H9V9 463 aa15.14■□□□□ 0.01
ERBB2-215ENST00000583391 ZNF214Q9UL59 606 aaPredicted RBP15.14■□□□□ 0.01
ERBB2-215ENST00000583391 CD2BP2O95400 341 aaKnown RBP15.13■□□□□ 0.01
ERBB2-215ENST00000583391 FDX1P10109 184 aa15.13■□□□□ 0.01
ERBB2-215ENST00000583391 ADD1P35611 737 aaKnown RBP15.13■□□□□ 0.01
ERBB2-215ENST00000583391 SP3Q02447 781 aa15.13■□□□□ 0.01
ERBB2-215ENST00000583391 Q3C1V9 767 aa15.13■□□□□ 0.01
ERBB2-215ENST00000583391 ZNF296Q8WUU4 475 aaPredicted RBP15.13■□□□□ 0.01
ERBB2-215ENST00000583391 PIGSQ96S52 555 aa15.13■□□□□ 0.01
ERBB2-215ENST00000583391 LZTS2Q9BRK4 669 aa15.13■□□□□ 0.01
ERBB2-215ENST00000583391 SPZ1Q9BXG8 430 aa15.13■□□□□ 0.01
ERBB2-215ENST00000583391 MOV10L1Q9BXT6 1211 aaKnown RBP15.13■□□□□ 0.01
ERBB2-215ENST00000583391 TEX13BQ9BXU2 312 aa15.13■□□□□ 0.01
ERBB2-215ENST00000583391 SLKQ9H2G2 1235 aaPredicted RBP15.13■□□□□ 0.01
ERBB2-215ENST00000583391 FAM217BQ9NTX9 383 aaPredicted RBP15.13■□□□□ 0.01
ERBB2-215ENST00000583391 ZNF536O15090 1300 aa15.13■□□□□ 0.01
ERBB2-215ENST00000583391 CCDC196A0A1B0GTZ2 297 aa15.12■□□□□ 0.01
ERBB2-215ENST00000583391 PFKFB2O60825 505 aa15.12■□□□□ 0.01
ERBB2-215ENST00000583391 FKTNO75072 461 aa15.12■□□□□ 0.01
ERBB2-215ENST00000583391 PPFIA3O75145 1194 aa15.12■□□□□ 0.01
ERBB2-215ENST00000583391 CTCFP49711 727 aaPredicted RBP15.12■□□□□ 0.01
ERBB2-215ENST00000583391 CCNA1P78396 465 aa15.12■□□□□ 0.01
ERBB2-215ENST00000583391 LACTBP83111 547 aaPredicted RBP15.12■□□□□ 0.01
ERBB2-215ENST00000583391 SCRN1Q12765 414 aa15.12■□□□□ 0.01
ERBB2-215ENST00000583391 ME3Q16798 604 aa15.12■□□□□ 0.01
ERBB2-215ENST00000583391 QRICH1Q2TAL8 776 aa15.12■□□□□ 0.01
ERBB2-215ENST00000583391 USH1GQ495M9 461 aa15.12■□□□□ 0.01
ERBB2-215ENST00000583391 WDR78Q5VTH9 848 aa15.12■□□□□ 0.01
ERBB2-215ENST00000583391 NECAB1Q8N987 351 aa15.12■□□□□ 0.01
ERBB2-215ENST00000583391 CD99L2Q8TCZ2 262 aa15.12■□□□□ 0.01
ERBB2-215ENST00000583391 AGBL1Q96MI9 1066 aa15.12■□□□□ 0.01
ERBB2-215ENST00000583391 ARHGAP39Q9C0H5 1083 aa15.12■□□□□ 0.01
ERBB2-215ENST00000583391 PORCNQ9H237 461 aa15.12■□□□□ 0.01
ERBB2-215ENST00000583391 RIOX1Q9H6W3 641 aa15.12■□□□□ 0.01
ERBB2-215ENST00000583391 CWC22Q9HCG8 908 aaKnown RBP15.12■□□□□ 0.01
ERBB2-215ENST00000583391 HOMER2Q9NSB8 354 aa15.12■□□□□ 0.01
ERBB2-215ENST00000583391 CCPG1Q9ULG6 757 aa15.12■□□□□ 0.01
ERBB2-215ENST00000583391 LIMCH1Q9UPQ0 1083 aa15.12■□□□□ 0.01
ERBB2-215ENST00000583391 hCG_1642624A0A1W2PR95 340 aa15.11■□□□□ 0.01
ERBB2-215ENST00000583391 CPLX1O14810 134 aa15.11■□□□□ 0.01
ERBB2-215ENST00000583391 ICAM1P05362 532 aa15.11■□□□□ 0.01
ERBB2-215ENST00000583391 STAT3P40763 770 aa15.11■□□□□ 0.01
ERBB2-215ENST00000583391 LBX1P52954 281 aa15.11■□□□□ 0.01
ERBB2-215ENST00000583391 OAZ1P54368 228 aa15.11■□□□□ 0.01
ERBB2-215ENST00000583391 KIF22Q14807 665 aa15.11■□□□□ 0.01
ERBB2-215ENST00000583391 PPP2R5BQ15173 497 aa15.11■□□□□ 0.01
ERBB2-215ENST00000583391 NOM1Q5C9Z4 860 aaKnown RBP15.11■□□□□ 0.01
ERBB2-215ENST00000583391 NCAPG2Q86XI2 1143 aa15.11■□□□□ 0.01
ERBB2-215ENST00000583391 CCAR1Q8IX12 1150 aaKnown RBP15.11■□□□□ 0.01
ERBB2-215ENST00000583391 GTF3C6Q969F1 213 aa15.11■□□□□ 0.01
ERBB2-215ENST00000583391 MTMR8Q96EF0 704 aa15.11■□□□□ 0.01
ERBB2-215ENST00000583391 RRP36Q96EU6 259 aaKnown RBP15.11■□□□□ 0.01
ERBB2-215ENST00000583391 EFCC1Q9HA90 598 aa15.11■□□□□ 0.01
ERBB2-215ENST00000583391 SEC63Q9UGP8 760 aaKnown RBP15.11■□□□□ 0.01
ERBB2-215ENST00000583391 HTTP42858 3142 aa15.11■□□□□ 0.01
ERBB2-215ENST00000583391 ATP2A1O14983 1001 aa15.1■□□□□ 0.01
ERBB2-215ENST00000583391 ZBTB5O15062 677 aa15.1■□□□□ 0.01
ERBB2-215ENST00000583391 PPP1R11O60927 126 aaPredicted RBP15.1■□□□□ 0.01
ERBB2-215ENST00000583391 ALAS1P13196 640 aa15.1■□□□□ 0.01
ERBB2-215ENST00000583391 ERCC3P19447 782 aa15.1■□□□□ 0.01
ERBB2-215ENST00000583391 CTGFP29279 349 aa15.1■□□□□ 0.01
ERBB2-215ENST00000583391 CAP1Q01518 475 aa15.1■□□□□ 0.01
ERBB2-215ENST00000583391 RIOX2Q8IUF8 465 aa15.1■□□□□ 0.01
ERBB2-215ENST00000583391 PHKBQ93100 1093 aa15.1■□□□□ 0.01
ERBB2-215ENST00000583391 ERO1AQ96HE7 468 aa15.1■□□□□ 0.01
ERBB2-215ENST00000583391 RNF146Q9NTX7 359 aa15.1■□□□□ 0.01
ERBB2-215ENST00000583391 RIPK3Q9Y572 518 aa15.1■□□□□ 0.01
ERBB2-215ENST00000583391 LRRC37A2A6NM11 1700 aa15.09■□□□□ 0.01
ERBB2-215ENST00000583391 TNPO2O14787 897 aaKnown RBP15.09■□□□□ 0.01
ERBB2-215ENST00000583391 DTNBO60941 627 aa15.09■□□□□ 0.01
ERBB2-215ENST00000583391 SLC25A27O95847 323 aa15.09■□□□□ 0.01
ERBB2-215ENST00000583391 SMARCA1P28370 1054 aa15.09■□□□□ 0.01
ERBB2-215ENST00000583391 MAPK4P31152 587 aa15.09■□□□□ 0.01
ERBB2-215ENST00000583391 PSMC4P43686 418 aa15.09■□□□□ 0.01
ERBB2-215ENST00000583391 FCGRTP55899 365 aa15.09■□□□□ 0.01
ERBB2-215ENST00000583391 FUT2Q10981 343 aa15.09■□□□□ 0.01
ERBB2-215ENST00000583391 ST3GAL1Q11201 340 aa15.09■□□□□ 0.01
ERBB2-215ENST00000583391 CPLX2Q6PUV4 134 aaKnown RBP15.09■□□□□ 0.01
ERBB2-215ENST00000583391 FBXO11Q86XK2 927 aa15.09■□□□□ 0.01
ERBB2-215ENST00000583391 CCDC83Q8IWF9 413 aa15.09■□□□□ 0.01
ERBB2-215ENST00000583391 SHCBP1Q8NEM2 672 aa15.09■□□□□ 0.01
ERBB2-215ENST00000583391 IL27Q8NEV9 243 aa15.09■□□□□ 0.01
ERBB2-215ENST00000583391 TRIM47Q96LD4 638 aa15.09■□□□□ 0.01
ERBB2-215ENST00000583391 ZSCAN31Q96LW9 406 aaPredicted RBP15.09■□□□□ 0.01
ERBB2-215ENST00000583391 SLC26A6Q9BXS9 759 aa15.09■□□□□ 0.01
ERBB2-215ENST00000583391 PNMA6FA0A0J9YX94 578 aa15.08■□□□□ 0
ERBB2-215ENST00000583391 FMNL1O95466 1100 aaPredicted RBP15.08■□□□□ 0
ERBB2-215ENST00000583391 IFNAR1P17181 557 aa15.08■□□□□ 0
ERBB2-215ENST00000583391 COPB2P35606 906 aa15.08■□□□□ 0
ERBB2-215ENST00000583391 NTRK3Q16288 839 aa15.08■□□□□ 0
ERBB2-215ENST00000583391 GPR142Q7Z601 462 aa15.08■□□□□ 0
ERBB2-215ENST00000583391 GPKOWQ92917 476 aaPredicted RBP eCLIP15.08■□□□□ 0
ERBB2-215ENST00000583391 TRERF1Q96PN7 1200 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms