RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 HSP90AA2PQ14568 343 aaPredicted RBP8.29□□□□□ -1.08
SMARCE1-219ENST00000583294 GAB4Q2WGN9 574 aa8.29□□□□□ -1.08
SMARCE1-219ENST00000583294 CRACR2BQ8N4Y2 399 aaPredicted RBP8.29□□□□□ -1.08
SMARCE1-219ENST00000583294 USHBP1Q8N6Y0 703 aa8.29□□□□□ -1.08
SMARCE1-219ENST00000583294 THAP3Q8WTV1 239 aaPredicted RBP8.29□□□□□ -1.08
SMARCE1-219ENST00000583294 FOXP3Q9BZS1 431 aa8.29□□□□□ -1.08
SMARCE1-219ENST00000583294 ARHGEF4Q9NR80 690 aa8.29□□□□□ -1.08
SMARCE1-219ENST00000583294 FKTNO75072 461 aa8.28□□□□□ -1.08
SMARCE1-219ENST00000583294 AMPD2Q01433 879 aa8.28□□□□□ -1.08
SMARCE1-219ENST00000583294 POU4F1Q01851 419 aa8.28□□□□□ -1.08
SMARCE1-219ENST00000583294 PRKCQQ04759 706 aa8.28□□□□□ -1.08
SMARCE1-219ENST00000583294 C2orf27AQ580R0 203 aa8.28□□□□□ -1.08
SMARCE1-219ENST00000583294 YOD1Q5VVQ6 348 aaPredicted RBP8.28□□□□□ -1.08
SMARCE1-219ENST00000583294 GTF2IRD2BQ6EKJ0 949 aa8.28□□□□□ -1.08
SMARCE1-219ENST00000583294 GTF2IRD2Q86UP8 949 aa8.28□□□□□ -1.08
SMARCE1-219ENST00000583294 NLGN1Q8N2Q7 840 aa8.28□□□□□ -1.08
SMARCE1-219ENST00000583294 ZBTB38Q8NAP3 1195 aaPredicted RBP8.28□□□□□ -1.08
SMARCE1-219ENST00000583294 ASB11Q8WXH4 323 aa8.28□□□□□ -1.08
SMARCE1-219ENST00000583294 MCMBPQ9BTE3 642 aa8.28□□□□□ -1.08
SMARCE1-219ENST00000583294 AARSD1Q9BTE6 412 aaKnown RBP8.28□□□□□ -1.08
SMARCE1-219ENST00000583294 VAV3Q9UKW4 847 aa8.28□□□□□ -1.08
SMARCE1-219ENST00000583294 PCDHA11Q9Y5I1 949 aa8.28□□□□□ -1.08
SMARCE1-219ENST00000583294 PTCH2Q9Y6C5 1203 aa8.28□□□□□ -1.08
SMARCE1-219ENST00000583294 TRAV20A0A0B4J274 112 aa8.27□□□□□ -1.09
SMARCE1-219ENST00000583294 ESYT3A0FGR9 886 aa8.27□□□□□ -1.09
SMARCE1-219ENST00000583294 STXBP3O00186 592 aa8.27□□□□□ -1.09
SMARCE1-219ENST00000583294 PRODHO43272 600 aa8.27□□□□□ -1.09
SMARCE1-219ENST00000583294 VAV1P15498 845 aa8.27□□□□□ -1.09
SMARCE1-219ENST00000583294 PCBP3P57721 371 aaKnown RBP8.27□□□□□ -1.09
SMARCE1-219ENST00000583294 IKZF1Q13422 519 aa8.27□□□□□ -1.09
SMARCE1-219ENST00000583294 SQSTM1Q13501 440 aa8.27□□□□□ -1.09
SMARCE1-219ENST00000583294 SF1Q15637 639 aaKnown RBP8.27□□□□□ -1.09
SMARCE1-219ENST00000583294 FOXB2Q5VYV0 432 aa8.27□□□□□ -1.09
SMARCE1-219ENST00000583294 SDE2Q6IQ49 451 aa8.27□□□□□ -1.09
SMARCE1-219ENST00000583294 FLCNQ8NFG4 579 aa8.27□□□□□ -1.09
SMARCE1-219ENST00000583294 CDC6Q99741 560 aa8.27□□□□□ -1.09
SMARCE1-219ENST00000583294 TCFL5Q9UL49 500 aa8.27□□□□□ -1.09
SMARCE1-219ENST00000583294 ESR1P03372 595 aa8.26□□□□□ -1.09
SMARCE1-219ENST00000583294 IFNGR1P15260 489 aa8.26□□□□□ -1.09
SMARCE1-219ENST00000583294 L1CAMP32004 1257 aa8.26□□□□□ -1.09
SMARCE1-219ENST00000583294 BMP8BP34820 402 aa8.26□□□□□ -1.09
SMARCE1-219ENST00000583294 KCNJ6P48051 423 aa8.26□□□□□ -1.09
SMARCE1-219ENST00000583294 EGR3Q06889 387 aa8.26□□□□□ -1.09
SMARCE1-219ENST00000583294 GRB10Q13322 594 aa8.26□□□□□ -1.09
SMARCE1-219ENST00000583294 ZNF574Q6ZN55 896 aaPredicted RBP8.26□□□□□ -1.09
SMARCE1-219ENST00000583294 TMPRSS7Q7RTY8 843 aa8.26□□□□□ -1.09
SMARCE1-219ENST00000583294 BCL7CQ8WUZ0 217 aaPredicted RBP8.26□□□□□ -1.09
SMARCE1-219ENST00000583294 IER2Q9BTL4 223 aa8.26□□□□□ -1.09
SMARCE1-219ENST00000583294 PAK6Q9NQU5 681 aaPredicted RBP8.26□□□□□ -1.09
SMARCE1-219ENST00000583294 GSTM1P09488 218 aa8.25□□□□□ -1.09
SMARCE1-219ENST00000583294 ECI1P42126 302 aa8.25□□□□□ -1.09
SMARCE1-219ENST00000583294 FAM209AQ5JX71 171 aa8.25□□□□□ -1.09
SMARCE1-219ENST00000583294 ZPBP2Q6X784 338 aa8.25□□□□□ -1.09
SMARCE1-219ENST00000583294 CBLL1Q75N03 491 aa8.25□□□□□ -1.09
SMARCE1-219ENST00000583294 SPRED2Q7Z698 418 aa8.25□□□□□ -1.09
SMARCE1-219ENST00000583294 JMYQ8N9B5 988 aa8.25□□□□□ -1.09
SMARCE1-219ENST00000583294 LINC00116Q8NCU8 138 aa8.25□□□□□ -1.09
SMARCE1-219ENST00000583294 MISP3Q96FF7 219 aa8.25□□□□□ -1.09
SMARCE1-219ENST00000583294 FCRL3Q96P31 734 aaPredicted RBP8.25□□□□□ -1.09
SMARCE1-219ENST00000583294 SLC12A9Q9BXP2 914 aa8.25□□□□□ -1.09
SMARCE1-219ENST00000583294 NKX2-4Q9H2Z4 354 aa8.25□□□□□ -1.09
SMARCE1-219ENST00000583294 CARS2Q9HA77 564 aaKnown RBP8.25□□□□□ -1.09
SMARCE1-219ENST00000583294 FANCLQ9NW38 375 aa8.25□□□□□ -1.09
SMARCE1-219ENST00000583294 SLC5A6Q9Y289 635 aa8.25□□□□□ -1.09
SMARCE1-219ENST00000583294 SNRPB2P08579 225 aaKnown RBP8.24□□□□□ -1.09
SMARCE1-219ENST00000583294 CD8BP10966 210 aa8.24□□□□□ -1.09
SMARCE1-219ENST00000583294 RPL10P27635 214 aaKnown RBP8.24□□□□□ -1.09
SMARCE1-219ENST00000583294 NOP2P46087 812 aaKnown RBP8.24□□□□□ -1.09
SMARCE1-219ENST00000583294 SCRN1Q12765 414 aa8.24□□□□□ -1.09
SMARCE1-219ENST00000583294 NSMFQ6X4W1 530 aa8.24□□□□□ -1.09
SMARCE1-219ENST00000583294 STK11IPQ8N1F8 1099 aa8.24□□□□□ -1.09
SMARCE1-219ENST00000583294 ZSWIM2Q8NEG5 633 aa8.24□□□□□ -1.09
SMARCE1-219ENST00000583294 IPO9Q96P70 1041 aaKnown RBP8.24□□□□□ -1.09
SMARCE1-219ENST00000583294 CDADC1Q9BWV3 514 aa8.24□□□□□ -1.09
SMARCE1-219ENST00000583294 C2orf71A6NGG8 1288 aa8.23□□□□□ -1.09
SMARCE1-219ENST00000583294 AURKAO14965 403 aa8.23□□□□□ -1.09
SMARCE1-219ENST00000583294 ZNF205O95201 554 aa8.23□□□□□ -1.09
SMARCE1-219ENST00000583294 CAPNS1P04632 268 aa8.23□□□□□ -1.09
SMARCE1-219ENST00000583294 PABPC1P11940 636 aaKnown RBP8.23□□□□□ -1.09
SMARCE1-219ENST00000583294 HOXC12P31275 282 aa8.23□□□□□ -1.09
SMARCE1-219ENST00000583294 PRSS53Q2L4Q9 553 aa8.23□□□□□ -1.09
SMARCE1-219ENST00000583294 RNF111Q6ZNA4 994 aa8.23□□□□□ -1.09
SMARCE1-219ENST00000583294 OSBP2Q969R2 916 aa8.23□□□□□ -1.09
SMARCE1-219ENST00000583294 EXOC2Q96KP1 924 aa8.23□□□□□ -1.09
SMARCE1-219ENST00000583294 SLC26A8Q96RN1 970 aa8.23□□□□□ -1.09
SMARCE1-219ENST00000583294 GPRC5CQ9NQ84 441 aa8.23□□□□□ -1.09
SMARCE1-219ENST00000583294 CYP26B1Q9NR63 512 aa8.23□□□□□ -1.09
SMARCE1-219ENST00000583294 AP5S1Q9NUS5 200 aa8.23□□□□□ -1.09
SMARCE1-219ENST00000583294 TRBV23-1A0A0A0MS06 115 aa8.22□□□□□ -1.09
SMARCE1-219ENST00000583294 FGFR1P11362 822 aa8.22□□□□□ -1.09
SMARCE1-219ENST00000583294 TEKQ02763 1124 aa8.22□□□□□ -1.09
SMARCE1-219ENST00000583294 ZP2Q05996 745 aa8.22□□□□□ -1.09
SMARCE1-219ENST00000583294 LONRF2Q1L5Z9 754 aa8.22□□□□□ -1.09
SMARCE1-219ENST00000583294 RTP2Q5QGT7 225 aa8.22□□□□□ -1.09
SMARCE1-219ENST00000583294 WAPLQ7Z5K2 1190 aa8.22□□□□□ -1.09
SMARCE1-219ENST00000583294 HOMER1Q86YM7 354 aa8.22□□□□□ -1.09
SMARCE1-219ENST00000583294 APPBP2Q92624 585 aa8.22□□□□□ -1.09
SMARCE1-219ENST00000583294 TMEM260Q9NX78 707 aa8.22□□□□□ -1.09
SMARCE1-219ENST00000583294 BACE2Q9Y5Z0 518 aa8.22□□□□□ -1.09
SMARCE1-219ENST00000583294 CADPSQ9ULU8 1353 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms