RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 APBA3O96018 575 aa15.43■□□□□ 0.06
SRSF1-205ENST00000582730 CCT6AP40227 531 aaKnown RBP15.43■□□□□ 0.06
SRSF1-205ENST00000582730 GALNT17Q6IS24 598 aa15.43■□□□□ 0.06
SRSF1-205ENST00000582730 TMC4Q7Z404 712 aa15.43■□□□□ 0.06
SRSF1-205ENST00000582730 NLGN1Q8N2Q7 840 aa15.43■□□□□ 0.06
SRSF1-205ENST00000582730 BAG1Q99933 345 aaPredicted RBP15.43■□□□□ 0.06
SRSF1-205ENST00000582730 DBNDD1Q9H9R9 158 aa15.43■□□□□ 0.06
SRSF1-205ENST00000582730 PSDA5PKW4 1024 aaPredicted RBP15.43■□□□□ 0.06
SRSF1-205ENST00000582730 ERICH4A6NGS2 130 aa15.43■□□□□ 0.06
SRSF1-205ENST00000582730 M0R2N6 131 aa15.43■□□□□ 0.06
SRSF1-205ENST00000582730 SLURP2P0DP57 97 aa15.43■□□□□ 0.06
SRSF1-205ENST00000582730 GNA11P29992 359 aa15.43■□□□□ 0.06
SRSF1-205ENST00000582730 NONOQ15233 471 aaKnown RBP eCLIP15.43■□□□□ 0.06
SRSF1-205ENST00000582730 DISC1Q9NRI5 854 aa15.43■□□□□ 0.06
SRSF1-205ENST00000582730 GDAQ9Y2T3 454 aa15.43■□□□□ 0.06
SRSF1-205ENST00000582730 RPN1P04843 607 aaKnown RBP15.42■□□□□ 0.06
SRSF1-205ENST00000582730 NPR1P16066 1061 aa15.42■□□□□ 0.06
SRSF1-205ENST00000582730 PARP3Q9Y6F1 533 aa15.42■□□□□ 0.06
SRSF1-205ENST00000582730 DDX60LQ5H9U9 1706 aaKnown RBP15.42■□□□□ 0.06
SRSF1-205ENST00000582730 KIF2AO00139 706 aaPredicted RBP15.42■□□□□ 0.06
SRSF1-205ENST00000582730 SLU7O95391 586 aaKnown RBP15.42■□□□□ 0.06
SRSF1-205ENST00000582730 RBM5P52756 815 aaKnown RBP eCLIP15.42■□□□□ 0.065e-41■■■■□ 19.3
SRSF1-205ENST00000582730 KRT25Q7Z3Z0 450 aa15.42■□□□□ 0.06
SRSF1-205ENST00000582730 DAGLBQ8NCG7 672 aa15.42■□□□□ 0.06
SRSF1-205ENST00000582730 COA7Q96BR5 231 aa15.42■□□□□ 0.06
SRSF1-205ENST00000582730 ZMYND12Q9H0C1 365 aa15.42■□□□□ 0.06
SRSF1-205ENST00000582730 TMEM260Q9NX78 707 aa15.42■□□□□ 0.06
SRSF1-205ENST00000582730 PDHBP11177 359 aa15.41■□□□□ 0.06
SRSF1-205ENST00000582730 FILIP1LQ4L180 1135 aa15.41■□□□□ 0.06
SRSF1-205ENST00000582730 ZNF446Q9NWS9 450 aa15.41■□□□□ 0.06
SRSF1-205ENST00000582730 MTMR4Q9NYA4 1195 aa15.41■□□□□ 0.06
SRSF1-205ENST00000582730 SERPINB13Q9UIV8 391 aa15.41■□□□□ 0.06
SRSF1-205ENST00000582730 MYH1P12882 1939 aa15.41■□□□□ 0.06
SRSF1-205ENST00000582730 KLRG2A4D1S0 409 aaPredicted RBP15.41■□□□□ 0.06
SRSF1-205ENST00000582730 CACNB3P54284 484 aa15.41■□□□□ 0.06
SRSF1-205ENST00000582730 TCP10Q12799 353 aa15.41■□□□□ 0.06
SRSF1-205ENST00000582730 CCDC96Q2M329 555 aa15.41■□□□□ 0.06
SRSF1-205ENST00000582730 PPFIBP1Q86W92 1011 aa15.41■□□□□ 0.06
SRSF1-205ENST00000582730 REXO1Q8N1G1 1221 aaKnown RBP15.41■□□□□ 0.06
SRSF1-205ENST00000582730 NELFBQ8WX92 580 aa15.41■□□□□ 0.06
SRSF1-205ENST00000582730 TMX1Q9H3N1 280 aa15.41■□□□□ 0.06
SRSF1-205ENST00000582730 RMND1Q9NWS8 449 aa15.41■□□□□ 0.06
SRSF1-205ENST00000582730 DNAI1Q9UI46 699 aa15.41■□□□□ 0.06
SRSF1-205ENST00000582730 ALDH1B1P30837 517 aa15.41■□□□□ 0.06
SRSF1-205ENST00000582730 PAK1Q13153 545 aa15.41■□□□□ 0.06
SRSF1-205ENST00000582730 KIAA0825Q8IV33 1275 aa15.41■□□□□ 0.06
SRSF1-205ENST00000582730 IGSF22Q8N9C0 903 aa15.41■□□□□ 0.06
SRSF1-205ENST00000582730 TBCKQ8TEA7 893 aa15.41■□□□□ 0.06
SRSF1-205ENST00000582730 A0A1B0GTH6 734 aa15.4■□□□□ 0.06
SRSF1-205ENST00000582730 PES1O00541 588 aaKnown RBP15.4■□□□□ 0.06
SRSF1-205ENST00000582730 CCP110O43303 1012 aa15.4■□□□□ 0.06
SRSF1-205ENST00000582730 OR52Z1P0C646 297 aa15.4■□□□□ 0.06
SRSF1-205ENST00000582730 IRX5P78411 483 aaPredicted RBP15.4■□□□□ 0.06
SRSF1-205ENST00000582730 NR1I3Q14994 352 aa15.4■□□□□ 0.06
SRSF1-205ENST00000582730 NEK8Q86SG6 692 aa15.4■□□□□ 0.06
SRSF1-205ENST00000582730 KCNQ5Q9NR82 932 aa15.4■□□□□ 0.06
SRSF1-205ENST00000582730 CDK5RAP2Q96SN8 1893 aa15.4■□□□□ 0.06
SRSF1-205ENST00000582730 ARHGAP6O43182 974 aa15.4■□□□□ 0.06
SRSF1-205ENST00000582730 PDE6BP35913 854 aa15.4■□□□□ 0.06
SRSF1-205ENST00000582730 TECP42680 631 aa15.4■□□□□ 0.06
SRSF1-205ENST00000582730 TC2NQ8N9U0 490 aa15.4■□□□□ 0.06
SRSF1-205ENST00000582730 TEKT1Q969V4 418 aa15.4■□□□□ 0.06
SRSF1-205ENST00000582730 VPS16Q9H269 839 aa15.4■□□□□ 0.06
SRSF1-205ENST00000582730 GOLGB1Q14789 3259 aaKnown RBP15.4■□□□□ 0.06
SRSF1-205ENST00000582730 FAM196BA6NMK8 535 aa15.39■□□□□ 0.05
SRSF1-205ENST00000582730 N4BP3O15049 544 aa15.39■□□□□ 0.05
SRSF1-205ENST00000582730 HLA-DOAP06340 250 aa15.39■□□□□ 0.05
SRSF1-205ENST00000582730 ZNF658Q5TYW1 1059 aaPredicted RBP15.39■□□□□ 0.05
SRSF1-205ENST00000582730 CABP7Q86V35 215 aa15.39■□□□□ 0.05
SRSF1-205ENST00000582730 ZSCAN29Q8IWY8 852 aaPredicted RBP15.39■□□□□ 0.05
SRSF1-205ENST00000582730 DESI2Q9BSY9 194 aa15.39■□□□□ 0.05
SRSF1-205ENST00000582730 KCNJ6P48051 423 aa15.39■□□□□ 0.05
SRSF1-205ENST00000582730 NFIAQ12857 509 aa15.39■□□□□ 0.05
SRSF1-205ENST00000582730 TBX2Q13207 712 aaPredicted RBP15.39■□□□□ 0.05
SRSF1-205ENST00000582730 CDC42EP5Q6NZY7 148 aa15.39■□□□□ 0.05
SRSF1-205ENST00000582730 KCND1Q9NSA2 647 aa15.39■□□□□ 0.05
SRSF1-205ENST00000582730 TAB2Q9NYJ8 693 aa15.39■□□□□ 0.05
SRSF1-205ENST00000582730 AKR1B15C9JRZ8 316 aaPredicted RBP15.39■□□□□ 0.05
SRSF1-205ENST00000582730 SLC16A2P36021 539 aa15.39■□□□□ 0.05
SRSF1-205ENST00000582730 TXKP42681 527 aa15.39■□□□□ 0.05
SRSF1-205ENST00000582730 PRCPP42785 496 aa15.39■□□□□ 0.05
SRSF1-205ENST00000582730 NAALADL2Q58DX5 795 aa15.39■□□□□ 0.05
SRSF1-205ENST00000582730 CT47A1Q5JQC4 288 aaPredicted RBP15.39■□□□□ 0.05
SRSF1-205ENST00000582730 ANKRD20A12PQ8NF67 263 aa15.39■□□□□ 0.05
SRSF1-205ENST00000582730 CTAGE1Q96RT6 745 aa15.39■□□□□ 0.05
SRSF1-205ENST00000582730 TRIM49BA6NDI0 452 aa15.38■□□□□ 0.05
SRSF1-205ENST00000582730 ZSCAN12O43309 604 aa15.38■□□□□ 0.05
SRSF1-205ENST00000582730 TTLL1O95922 423 aa15.38■□□□□ 0.05
SRSF1-205ENST00000582730 PLCG1P19174 1290 aa15.38■□□□□ 0.05
SRSF1-205ENST00000582730 ERCC6LQ2NKX8 1250 aa15.38■□□□□ 0.05
SRSF1-205ENST00000582730 CDKAL1Q5VV42 579 aa15.38■□□□□ 0.05
SRSF1-205ENST00000582730 MASTLQ96GX5 879 aa15.38■□□□□ 0.05
SRSF1-205ENST00000582730 PPP2R2CQ9Y2T4 447 aa15.38■□□□□ 0.05
SRSF1-205ENST00000582730 PCDHAC2Q9Y5I4 1007 aa15.38■□□□□ 0.05
SRSF1-205ENST00000582730 BRWD3Q6RI45 1802 aa15.38■□□□□ 0.05
SRSF1-205ENST00000582730 TNNI2P48788 182 aa15.38■□□□□ 0.05
SRSF1-205ENST00000582730 GABPAQ06546 454 aa15.38■□□□□ 0.05
SRSF1-205ENST00000582730 RBL2Q08999 1139 aa15.38■□□□□ 0.05
SRSF1-205ENST00000582730 TTBK2Q6IQ55 1244 aa15.38■□□□□ 0.05
SRSF1-205ENST00000582730 TOGARAM2Q6ZUX3 1019 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms