RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 CLCQ05315 142 aa6.58□□□□□ -1.36
SMCHD1-206ENST00000581631 TMEM62Q0P6H9 643 aa6.58□□□□□ -1.36
SMCHD1-206ENST00000581631 RAB3GAP1Q15042 981 aa6.58□□□□□ -1.36
SMCHD1-206ENST00000581631 PLEKHN1Q494U1 663 aaPredicted RBP6.58□□□□□ -1.36
SMCHD1-206ENST00000581631 PWWP2AQ96N64 755 aa6.58□□□□□ -1.36
SMCHD1-206ENST00000581631 JMJD8Q96S16 334 aa6.58□□□□□ -1.36
SMCHD1-206ENST00000581631 GFOD1Q9NXC2 390 aa6.58□□□□□ -1.36
SMCHD1-206ENST00000581631 VTI1BQ9UEU0 232 aa6.58□□□□□ -1.36
SMCHD1-206ENST00000581631 NUDT19A8MXV4 375 aa6.57□□□□□ -1.36
SMCHD1-206ENST00000581631 SHOXO15266 292 aa6.57□□□□□ -1.36
SMCHD1-206ENST00000581631 BUB1BO60566 1050 aaPredicted RBP6.57□□□□□ -1.36
SMCHD1-206ENST00000581631 VAV1P15498 845 aa6.57□□□□□ -1.36
SMCHD1-206ENST00000581631 NME1P15531 152 aaKnown RBP6.57□□□□□ -1.36
SMCHD1-206ENST00000581631 ARL4AP40617 200 aa6.57□□□□□ -1.36
SMCHD1-206ENST00000581631 NCKAP1LP55160 1127 aa6.57□□□□□ -1.36
SMCHD1-206ENST00000581631 CYP4F8P98187 520 aa6.57□□□□□ -1.36
SMCHD1-206ENST00000581631 REXO1Q8N1G1 1221 aaKnown RBP6.57□□□□□ -1.36
SMCHD1-206ENST00000581631 NUP43Q8NFH3 380 aa6.57□□□□□ -1.36
SMCHD1-206ENST00000581631 ANTXR1Q9H6X2 564 aa6.57□□□□□ -1.36
SMCHD1-206ENST00000581631 AP5S1Q9NUS5 200 aa6.57□□□□□ -1.36
SMCHD1-206ENST00000581631 IMPACTQ9P2X3 320 aa6.57□□□□□ -1.36
SMCHD1-206ENST00000581631 MSL3P1P0C860 447 aa6.56□□□□□ -1.36
SMCHD1-206ENST00000581631 MVKQ03426 396 aa6.56□□□□□ -1.36
SMCHD1-206ENST00000581631 VWA3BQ502W6 1294 aa6.56□□□□□ -1.36
SMCHD1-206ENST00000581631 CRTC3Q6UUV7 619 aa6.56□□□□□ -1.36
SMCHD1-206ENST00000581631 ZNF296Q8WUU4 475 aaPredicted RBP6.56□□□□□ -1.36
SMCHD1-206ENST00000581631 ADAMTS1Q9UHI8 967 aa6.56□□□□□ -1.36
SMCHD1-206ENST00000581631 MEIS1O00470 390 aa6.55□□□□□ -1.36
SMCHD1-206ENST00000581631 MAPKAPK2P49137 400 aa6.55□□□□□ -1.36
SMCHD1-206ENST00000581631 AUHQ13825 339 aaKnown RBP6.55□□□□□ -1.36
SMCHD1-206ENST00000581631 SLC6A18Q96N87 628 aa6.55□□□□□ -1.36
SMCHD1-206ENST00000581631 CDADC1Q9BWV3 514 aa6.55□□□□□ -1.36
SMCHD1-206ENST00000581631 PLA2G2DQ9UNK4 145 aa6.55□□□□□ -1.36
SMCHD1-206ENST00000581631 PCDHB12Q9Y5F1 795 aa6.55□□□□□ -1.36
SMCHD1-206ENST00000581631 SRGAP3O43295 1099 aa6.54□□□□□ -1.36
SMCHD1-206ENST00000581631 PRICKLE3O43900 615 aaPredicted RBP6.54□□□□□ -1.36
SMCHD1-206ENST00000581631 PLA2G1BP04054 148 aaKnown RBP6.54□□□□□ -1.36
SMCHD1-206ENST00000581631 SLURP1P55000 103 aa6.54□□□□□ -1.36
SMCHD1-206ENST00000581631 SLC9A7Q96T83 725 aa6.54□□□□□ -1.36
SMCHD1-206ENST00000581631 SLC12A9Q9BXP2 914 aa6.54□□□□□ -1.36
SMCHD1-206ENST00000581631 SRRTQ9BXP5 876 aaKnown RBP6.54□□□□□ -1.36
SMCHD1-206ENST00000581631 MKRN2Q9H000 416 aaKnown RBP6.54□□□□□ -1.36
SMCHD1-206ENST00000581631 UBP1Q9NZI7 540 aa6.54□□□□□ -1.36
SMCHD1-206ENST00000581631 LIMS1P48059 325 aa6.53□□□□□ -1.36
SMCHD1-206ENST00000581631 HTRA3P83110 453 aa6.53□□□□□ -1.36
SMCHD1-206ENST00000581631 ZNF200P98182 395 aaPredicted RBP6.53□□□□□ -1.36
SMCHD1-206ENST00000581631 NR1I3Q14994 352 aa6.53□□□□□ -1.36
SMCHD1-206ENST00000581631 SPATS1Q496A3 300 aa6.53□□□□□ -1.36
SMCHD1-206ENST00000581631 ZFYVE27Q5T4F4 411 aa6.53□□□□□ -1.36
SMCHD1-206ENST00000581631 ZC3H14Q6PJT7 736 aaKnown RBP6.53□□□□□ -1.36
SMCHD1-206ENST00000581631 EAF1Q96JC9 268 aaPredicted RBP6.53□□□□□ -1.36
SMCHD1-206ENST00000581631 MRS2Q9HD23 443 aa6.53□□□□□ -1.36
SMCHD1-206ENST00000581631 C9IYK1 514 aa6.52□□□□□ -1.37
SMCHD1-206ENST00000581631 GSNP06396 782 aa6.52□□□□□ -1.37
SMCHD1-206ENST00000581631 DBHP09172 617 aa6.52□□□□□ -1.37
SMCHD1-206ENST00000581631 ACRP10323 421 aa6.52□□□□□ -1.37
SMCHD1-206ENST00000581631 RTP5Q14D33 572 aa6.52□□□□□ -1.37
SMCHD1-206ENST00000581631 SEZ6Q53EL9 994 aa6.52□□□□□ -1.37
SMCHD1-206ENST00000581631 ERICH6BQ5W0A0 696 aa6.52□□□□□ -1.37
SMCHD1-206ENST00000581631 GK5Q6ZS86 529 aa6.52□□□□□ -1.37
SMCHD1-206ENST00000581631 SLITRK4Q8IW52 837 aa6.52□□□□□ -1.37
SMCHD1-206ENST00000581631 SUCOQ9UBS9 1254 aaKnown RBP6.52□□□□□ -1.37
SMCHD1-206ENST00000581631 HCFC2Q9Y5Z7 792 aa6.52□□□□□ -1.37
SMCHD1-206ENST00000581631 DLX2Q07687 328 aaPredicted RBP6.51□□□□□ -1.37
SMCHD1-206ENST00000581631 LRRFIP1Q32MZ4 808 aaKnown RBP6.51□□□□□ -1.37
SMCHD1-206ENST00000581631 KRTAP5-3Q6L8H2 238 aa6.51□□□□□ -1.37
SMCHD1-206ENST00000581631 C7orf61Q8IZ16 206 aa6.51□□□□□ -1.37
SMCHD1-206ENST00000581631 FNIP1Q8TF40 1166 aa6.51□□□□□ -1.37
SMCHD1-206ENST00000581631 FBXL21Q9UKT6 434 aa6.51□□□□□ -1.37
SMCHD1-206ENST00000581631 FGF10O15520 208 aaPredicted RBP6.5□□□□□ -1.37
SMCHD1-206ENST00000581631 CYBBP04839 570 aa6.5□□□□□ -1.37
SMCHD1-206ENST00000581631 ATF2P15336 505 aa6.5□□□□□ -1.37
SMCHD1-206ENST00000581631 KCNC1P48547 511 aa6.5□□□□□ -1.37
SMCHD1-206ENST00000581631 PAQR3Q6TCH7 311 aa6.5□□□□□ -1.37
SMCHD1-206ENST00000581631 LIPIQ6XZB0 460 aa6.5□□□□□ -1.37
SMCHD1-206ENST00000581631 BORCS6Q96GS4 357 aa6.5□□□□□ -1.37
SMCHD1-206ENST00000581631 BDH2Q9BUT1 245 aa6.5□□□□□ -1.37
SMCHD1-206ENST00000581631 NT5C1AQ9BXI3 368 aa6.5□□□□□ -1.37
SMCHD1-206ENST00000581631 SH3D21A4FU49 640 aa6.49□□□□□ -1.37
SMCHD1-206ENST00000581631 H0Y8X5 98 aa6.49□□□□□ -1.37
SMCHD1-206ENST00000581631 PFKLP17858 780 aa6.49□□□□□ -1.37
SMCHD1-206ENST00000581631 ZNF165P49910 485 aa6.49□□□□□ -1.37
SMCHD1-206ENST00000581631 MRPL58Q14197 206 aaKnown RBP6.49□□□□□ -1.37
SMCHD1-206ENST00000581631 INTS3Q68E01 1043 aaKnown RBP6.49□□□□□ -1.37
SMCHD1-206ENST00000581631 SAPCD2Q86UD0 394 aa6.49□□□□□ -1.37
SMCHD1-206ENST00000581631 PPFIBP1Q86W92 1011 aa6.49□□□□□ -1.37
SMCHD1-206ENST00000581631 CNOT11Q9UKZ1 510 aaKnown RBP6.49□□□□□ -1.37
SMCHD1-206ENST00000581631 GSTM1P09488 218 aa6.48□□□□□ -1.37
SMCHD1-206ENST00000581631 PLP2Q04941 152 aa6.48□□□□□ -1.37
SMCHD1-206ENST00000581631 APOBRQ0VD83 1088 aa6.48□□□□□ -1.37
SMCHD1-206ENST00000581631 ANKRD39Q53RE8 183 aa6.48□□□□□ -1.37
SMCHD1-206ENST00000581631 HLA-DQA1Q5Y7H0 255 aa6.48□□□□□ -1.37
SMCHD1-206ENST00000581631 HHIPL2Q6UWX4 724 aa6.48□□□□□ -1.37
SMCHD1-206ENST00000581631 AEBP1Q8IUX7 1158 aa6.48□□□□□ -1.37
SMCHD1-206ENST00000581631 ADGRG2Q8IZP9 1017 aa6.48□□□□□ -1.37
SMCHD1-206ENST00000581631 NLGN1Q8N2Q7 840 aa6.48□□□□□ -1.37
SMCHD1-206ENST00000581631 A0A1B0GTL3 188 aa6.47□□□□□ -1.37
SMCHD1-206ENST00000581631 PMS1P54277 932 aaKnown RBP6.47□□□□□ -1.37
SMCHD1-206ENST00000581631 CORO7P57737 925 aa6.47□□□□□ -1.37
SMCHD1-206ENST00000581631 FOXO4P98177 505 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms