RNA–Protein interactions for RNA: ENST00000580898.5

PGAP3-207, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 4

Gene PGAP3, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-207ENST00000580898 PCSK9Q8NBP7 692 aaKnown RBP16.06■□□□□ 0.16
PGAP3-207ENST00000580898 SLC17A8Q8NDX2 589 aa16.06■□□□□ 0.16
PGAP3-207ENST00000580898 STARD7Q9NQZ5 370 aa16.06■□□□□ 0.16
PGAP3-207ENST00000580898 RNF146Q9NTX7 359 aa16.06■□□□□ 0.16
PGAP3-207ENST00000580898 SZT2Q5T011 3432 aa16.05■□□□□ 0.16
PGAP3-207ENST00000580898 ASB14A6NK59 587 aa16.05■□□□□ 0.16
PGAP3-207ENST00000580898 DCDC2CA8MYV0 355 aa16.05■□□□□ 0.16
PGAP3-207ENST00000580898 TRIM6-TRIM34B2RNG4 842 aa16.05■□□□□ 0.16
PGAP3-207ENST00000580898 PCP11498 1178 aaKnown RBP16.05■□□□□ 0.16
PGAP3-207ENST00000580898 ACLYP53396 1101 aa16.05■□□□□ 0.16
PGAP3-207ENST00000580898 TLE2Q04725 743 aa16.05■□□□□ 0.16
PGAP3-207ENST00000580898 CCDC96Q2M329 555 aa16.05■□□□□ 0.16
PGAP3-207ENST00000580898 FAM109BQ6ICB4 259 aaPredicted RBP16.05■□□□□ 0.16
PGAP3-207ENST00000580898 ARMCX2Q7L311 632 aa16.05■□□□□ 0.16
PGAP3-207ENST00000580898 DCAF4Q8WV16 495 aa16.05■□□□□ 0.16
PGAP3-207ENST00000580898 BADQ92934 168 aa16.05■□□□□ 0.16
PGAP3-207ENST00000580898 GLT1D1Q96MS3 346 aa16.05■□□□□ 0.16
PGAP3-207ENST00000580898 RWDD1Q9H446 243 aaPredicted RBP16.05■□□□□ 0.16
PGAP3-207ENST00000580898 STXBP5LQ9Y2K9 1186 aa16.05■□□□□ 0.16
PGAP3-207ENST00000580898 ZMYM6O95789 1325 aa16.04■□□□□ 0.16
PGAP3-207ENST00000580898 PQBP1O60828 265 aaKnown RBP16.04■□□□□ 0.16
PGAP3-207ENST00000580898 C6orf222P0C671 652 aaPredicted RBP16.04■□□□□ 0.16
PGAP3-207ENST00000580898 ALAS1P13196 640 aa16.04■□□□□ 0.16
PGAP3-207ENST00000580898 RAG1P15918 1043 aa16.04■□□□□ 0.16
PGAP3-207ENST00000580898 CST5P28325 142 aaPredicted RBP16.04■□□□□ 0.16
PGAP3-207ENST00000580898 VPS53Q5VIR6 699 aa16.04■□□□□ 0.16
PGAP3-207ENST00000580898 KCTD1Q719H9 257 aa16.04■□□□□ 0.16
PGAP3-207ENST00000580898 Q7L0L9 218 aa16.04■□□□□ 0.16
PGAP3-207ENST00000580898 TOX2Q96NM4 488 aa16.04■□□□□ 0.16
PGAP3-207ENST00000580898 TRERF1Q96PN7 1200 aa16.04■□□□□ 0.16
PGAP3-207ENST00000580898 MTMR10Q9NXD2 777 aa16.04■□□□□ 0.16
PGAP3-207ENST00000580898 PNMA2Q9UL42 364 aa16.04■□□□□ 0.16
PGAP3-207ENST00000580898 LTBP2Q14767 1821 aa16.03■□□□□ 0.16
PGAP3-207ENST00000580898 ELP1O95163 1332 aa16.03■□□□□ 0.16
PGAP3-207ENST00000580898 FOXP2O15409 715 aa16.03■□□□□ 0.16
PGAP3-207ENST00000580898 KCNA10Q16322 511 aa16.03■□□□□ 0.16
PGAP3-207ENST00000580898 CCDC144BQ3MJ40 725 aa16.03■□□□□ 0.16
PGAP3-207ENST00000580898 RRP12Q5JTH9 1297 aaKnown RBP16.03■□□□□ 0.16
PGAP3-207ENST00000580898 ZNF697Q5TEC3 545 aa16.03■□□□□ 0.16
PGAP3-207ENST00000580898 CCDC174Q6PII3 467 aa16.03■□□□□ 0.16
PGAP3-207ENST00000580898 ANKRD33Q7Z3H0 272 aa16.03■□□□□ 0.16
PGAP3-207ENST00000580898 CCDC144CPQ8IYA2 1237 aa16.03■□□□□ 0.16
PGAP3-207ENST00000580898 KLHDC9Q8NEP7 349 aa16.03■□□□□ 0.16
PGAP3-207ENST00000580898 RILPL2Q969X0 211 aa16.03■□□□□ 0.16
PGAP3-207ENST00000580898 LENG1Q96BZ8 264 aaPredicted RBP16.03■□□□□ 0.16
PGAP3-207ENST00000580898 AGBL1Q96MI9 1066 aa16.03■□□□□ 0.16
PGAP3-207ENST00000580898 LNPKQ9C0E8 428 aa16.03■□□□□ 0.16
PGAP3-207ENST00000580898 A1CFQ9NQ94 594 aaKnown RBP16.03■□□□□ 0.16
PGAP3-207ENST00000580898 IL17RBQ9NRM6 502 aa16.03■□□□□ 0.16
PGAP3-207ENST00000580898 TMEM39AQ9NV64 488 aa16.03■□□□□ 0.16
PGAP3-207ENST00000580898 CCPG1Q9ULG6 757 aa16.03■□□□□ 0.16
PGAP3-207ENST00000580898 MTMR7Q9Y216 660 aa16.03■□□□□ 0.16
PGAP3-207ENST00000580898 CCDC171Q6TFL3 1326 aa16.02■□□□□ 0.16
PGAP3-207ENST00000580898 TRIM43BA6NCK2 446 aa16.02■□□□□ 0.16
PGAP3-207ENST00000580898 KIAA0355O15063 1070 aa16.02■□□□□ 0.16
PGAP3-207ENST00000580898 FGAP02671 866 aa16.02■□□□□ 0.16
PGAP3-207ENST00000580898 FGRP09769 529 aa16.02■□□□□ 0.16
PGAP3-207ENST00000580898 TOP1P11387 765 aaKnown RBP16.02■□□□□ 0.16
PGAP3-207ENST00000580898 NT5C2P49902 561 aa16.02■□□□□ 0.16
PGAP3-207ENST00000580898 GJA9P57773 515 aa16.02■□□□□ 0.16
PGAP3-207ENST00000580898 NOL8Q76FK4 1167 aaKnown RBP16.02■□□□□ 0.16
PGAP3-207ENST00000580898 FAM133AQ8N9E0 248 aa16.02■□□□□ 0.16
PGAP3-207ENST00000580898 VTI1AQ96AJ9 217 aa16.02■□□□□ 0.16
PGAP3-207ENST00000580898 TRIM43Q96BQ3 446 aaPredicted RBP16.02■□□□□ 0.16
PGAP3-207ENST00000580898 FAM227BQ96M60 508 aa16.02■□□□□ 0.16
PGAP3-207ENST00000580898 RNF41Q9H4P4 317 aaPredicted RBP16.02■□□□□ 0.16
PGAP3-207ENST00000580898 TCP11L1Q9NUJ3 509 aa16.02■□□□□ 0.16
PGAP3-207ENST00000580898 PRR12Q9ULL5 1215 aa16.02■□□□□ 0.16
PGAP3-207ENST00000580898 ZNF536O15090 1300 aa16.01■□□□□ 0.15
PGAP3-207ENST00000580898 A0A0D9SFI3 127 aa16.01■□□□□ 0.15
PGAP3-207ENST00000580898 A0A0U1RQG5 324 aaPredicted RBP16.01■□□□□ 0.15
PGAP3-207ENST00000580898 TLR3O15455 904 aaKnown RBP16.01■□□□□ 0.15
PGAP3-207ENST00000580898 NMT2O60551 498 aa16.01■□□□□ 0.15
PGAP3-207ENST00000580898 ICAM1P05362 532 aa16.01■□□□□ 0.15
PGAP3-207ENST00000580898 HSPD1P10809 573 aaKnown RBP16.01■□□□□ 0.15
PGAP3-207ENST00000580898 NOVP48745 357 aa16.01■□□□□ 0.15
PGAP3-207ENST00000580898 CNTN2Q02246 1040 aa16.01■□□□□ 0.15
PGAP3-207ENST00000580898 SHHQ15465 462 aa16.01■□□□□ 0.15
PGAP3-207ENST00000580898 GNASQ5JWF2 1037 aa16.01■□□□□ 0.15
PGAP3-207ENST00000580898 MFSD6Q6ZSS7 791 aa16.01■□□□□ 0.15
PGAP3-207ENST00000580898 SH3RF1Q7Z6J0 888 aa16.01■□□□□ 0.15
PGAP3-207ENST00000580898 CHMP4CQ96CF2 233 aa16.01■□□□□ 0.15
PGAP3-207ENST00000580898 FGD4Q96M96 766 aa16.01■□□□□ 0.15
PGAP3-207ENST00000580898 UPF3AQ9H1J1 476 aaKnown RBP16.01■□□□□ 0.15
PGAP3-207ENST00000580898 LAMA3Q16787 3333 aa16■□□□□ 0.15
PGAP3-207ENST00000580898 ZEB2O60315 1214 aa16■□□□□ 0.15
PGAP3-207ENST00000580898 ASGR1P07306 291 aa16■□□□□ 0.15
PGAP3-207ENST00000580898 SMAD3P84022 425 aaKnown RBP16■□□□□ 0.15
PGAP3-207ENST00000580898 TNFAIP2Q03169 654 aa16■□□□□ 0.15
PGAP3-207ENST00000580898 FPGSQ05932 587 aa16■□□□□ 0.15
PGAP3-207ENST00000580898 NMIQ13287 307 aaPredicted RBP16■□□□□ 0.15
PGAP3-207ENST00000580898 CCSAPQ6IQ19 270 aaPredicted RBP16■□□□□ 0.15
PGAP3-207ENST00000580898 SMC5Q8IY18 1101 aa16■□□□□ 0.15
PGAP3-207ENST00000580898 TTC14Q96N46 770 aa16■□□□□ 0.15
PGAP3-207ENST00000580898 MPHOSPH6Q99547 160 aaKnown RBP16■□□□□ 0.15
PGAP3-207ENST00000580898 AP5M1Q9H0R1 490 aa16■□□□□ 0.15
PGAP3-207ENST00000580898 RANBP17Q9H2T7 1088 aaKnown RBP16■□□□□ 0.15
PGAP3-207ENST00000580898 INCENPQ9NQS7 918 aa16■□□□□ 0.15
PGAP3-207ENST00000580898 ADD3Q9UEY8 706 aaKnown RBP16■□□□□ 0.15
PGAP3-207ENST00000580898 LOC102724159A0A0B4J2E5 919 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms