RNA–Protein interactions for RNA: ENST00000580533.1

SNORD3C-201, Transcript of small nucleolar RNA, C/D box 3C, humanhuman

BASIC

Gene SNORD3C, Length 581 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3C-201ENST00000580533 HOMER1Q86YM7 354 aa13.58□□□□□ -0.24
SNORD3C-201ENST00000580533 CCDC82Q8N4S0 544 aa13.58□□□□□ -0.24
SNORD3C-201ENST00000580533 SRBD1Q8N5C6 995 aaKnown RBP13.58□□□□□ -0.24
SNORD3C-201ENST00000580533 CCDC148Q8NFR7 591 aa13.58□□□□□ -0.24
SNORD3C-201ENST00000580533 TEX13BQ9BXU2 312 aa13.58□□□□□ -0.24
SNORD3C-201ENST00000580533 MAF1Q9H063 256 aa13.58□□□□□ -0.24
SNORD3C-201ENST00000580533 JMJD4Q9H9V9 463 aa13.58□□□□□ -0.24
SNORD3C-201ENST00000580533 FAM217BQ9NTX9 383 aaPredicted RBP13.58□□□□□ -0.24
SNORD3C-201ENST00000580533 SAGE1Q9NXZ1 904 aa13.58□□□□□ -0.24
SNORD3C-201ENST00000580533 ADAMTS5Q9UNA0 930 aa13.58□□□□□ -0.24
SNORD3C-201ENST00000580533 CNTNAP5Q8WYK1 1306 aa13.58□□□□□ -0.24
SNORD3C-201ENST00000580533 THSD7BQ9C0I4 1608 aa13.57□□□□□ -0.24
SNORD3C-201ENST00000580533 PTPDC1A2A3K4 754 aa13.57□□□□□ -0.24
SNORD3C-201ENST00000580533 IGF2BP3O00425 579 aaKnown RBP eCLIP13.57□□□□□ -0.24
SNORD3C-201ENST00000580533 LARGE1O95461 756 aa13.57□□□□□ -0.24
SNORD3C-201ENST00000580533 SLC25A27O95847 323 aa13.57□□□□□ -0.24
SNORD3C-201ENST00000580533 ICAM1P05362 532 aa13.57□□□□□ -0.24
SNORD3C-201ENST00000580533 NTRK3Q16288 839 aa13.57□□□□□ -0.24
SNORD3C-201ENST00000580533 RASGRP2Q7LDG7 609 aa13.57□□□□□ -0.24
SNORD3C-201ENST00000580533 FBXO11Q86XK2 927 aa13.57□□□□□ -0.24
SNORD3C-201ENST00000580533 GPRC5AQ8NFJ5 357 aa13.57□□□□□ -0.24
SNORD3C-201ENST00000580533 ATG4CQ96DT6 458 aa13.57□□□□□ -0.24
SNORD3C-201ENST00000580533 P2RX7Q99572 595 aaKnown RBP13.57□□□□□ -0.24
SNORD3C-201ENST00000580533 PTPN18Q99952 460 aa13.57□□□□□ -0.24
SNORD3C-201ENST00000580533 CWC22Q9HCG8 908 aaKnown RBP13.57□□□□□ -0.24
SNORD3C-201ENST00000580533 FBXO28Q9NVF7 368 aa13.57□□□□□ -0.24
SNORD3C-201ENST00000580533 ORC3Q9UBD5 711 aaPredicted RBP13.57□□□□□ -0.24
SNORD3C-201ENST00000580533 FBXO40Q9UH90 709 aa13.57□□□□□ -0.24
SNORD3C-201ENST00000580533 V9GY48 417 aaPredicted RBP13.57□□□□□ -0.24
SNORD3C-201ENST00000580533 ABCB11O95342 1321 aa13.57□□□□□ -0.24
SNORD3C-201ENST00000580533 TLR2O60603 784 aa13.56□□□□□ -0.24
SNORD3C-201ENST00000580533 SCG2P13521 617 aa13.56□□□□□ -0.24
SNORD3C-201ENST00000580533 STAT3P40763 770 aa13.56□□□□□ -0.24
SNORD3C-201ENST00000580533 PLS1Q14651 629 aa13.56□□□□□ -0.24
SNORD3C-201ENST00000580533 PFKFB3Q16875 520 aaPredicted RBP13.56□□□□□ -0.24
SNORD3C-201ENST00000580533 FAM110CQ1W6H9 321 aa13.56□□□□□ -0.24
SNORD3C-201ENST00000580533 QRICH1Q2TAL8 776 aa13.56□□□□□ -0.24
SNORD3C-201ENST00000580533 CCDC174Q6PII3 467 aa13.56□□□□□ -0.24
SNORD3C-201ENST00000580533 RGS22Q8NE09 1264 aa13.56□□□□□ -0.24
SNORD3C-201ENST00000580533 NSUN7Q8NE18 718 aaKnown RBP13.56□□□□□ -0.24
SNORD3C-201ENST00000580533 PHKBQ93100 1093 aa13.56□□□□□ -0.24
SNORD3C-201ENST00000580533 MTMR8Q96EF0 704 aa13.56□□□□□ -0.24
SNORD3C-201ENST00000580533 PIGSQ96S52 555 aa13.56□□□□□ -0.24
SNORD3C-201ENST00000580533 PAGR1Q9BTK6 254 aa13.56□□□□□ -0.24
SNORD3C-201ENST00000580533 CFHR5Q9BXR6 569 aa13.56□□□□□ -0.24
SNORD3C-201ENST00000580533 BRMS1Q9HCU9 246 aa13.56□□□□□ -0.24
SNORD3C-201ENST00000580533 SH3GLB2Q9NR46 395 aa13.56□□□□□ -0.24
SNORD3C-201ENST00000580533 CCPG1Q9ULG6 757 aa13.56□□□□□ -0.24
SNORD3C-201ENST00000580533 MRPL11Q9Y3B7 192 aaKnown RBP13.56□□□□□ -0.24
SNORD3C-201ENST00000580533 CYP2C8P10632 490 aa13.55□□□□□ -0.24
SNORD3C-201ENST00000580533 HTRA3P83110 453 aa13.55□□□□□ -0.24
SNORD3C-201ENST00000580533 FUT2Q10981 343 aa13.55□□□□□ -0.24
SNORD3C-201ENST00000580533 ARHGEF6Q15052 776 aa13.55□□□□□ -0.24
SNORD3C-201ENST00000580533 SNRNP48Q6IEG0 339 aaKnown RBP13.55□□□□□ -0.24
SNORD3C-201ENST00000580533 HEATR3Q7Z4Q2 680 aa13.55□□□□□ -0.24
SNORD3C-201ENST00000580533 NBPF11Q86T75 865 aa13.55□□□□□ -0.24
SNORD3C-201ENST00000580533 MCF2L2Q86YR7 1114 aa13.55□□□□□ -0.24
SNORD3C-201ENST00000580533 CMTR1Q8N1G2 835 aaKnown RBP13.55□□□□□ -0.24
SNORD3C-201ENST00000580533 SAMD3Q8N6K7 520 aa13.55□□□□□ -0.24
SNORD3C-201ENST00000580533 SHCBP1Q8NEM2 672 aa13.55□□□□□ -0.24
SNORD3C-201ENST00000580533 SMARCC2Q8TAQ2 1214 aa13.55□□□□□ -0.24
SNORD3C-201ENST00000580533 BICD2Q8TD16 824 aa13.55□□□□□ -0.24
SNORD3C-201ENST00000580533 MROH8Q9H579 483 aa13.55□□□□□ -0.24
SNORD3C-201ENST00000580533 MORF4L1Q9UBU8 362 aa13.55□□□□□ -0.24
SNORD3C-201ENST00000580533 PCDHA1Q9Y5I3 950 aa13.55□□□□□ -0.24
SNORD3C-201ENST00000580533 CYTH3O43739 400 aa13.54□□□□□ -0.24
SNORD3C-201ENST00000580533 CALML3P27482 149 aa13.54□□□□□ -0.24
SNORD3C-201ENST00000580533 GNA11P29992 359 aa13.54□□□□□ -0.24
SNORD3C-201ENST00000580533 NAPAP54920 295 aa13.54□□□□□ -0.24
SNORD3C-201ENST00000580533 ERVK-9P63128 1117 aa13.54□□□□□ -0.24
SNORD3C-201ENST00000580533 ERVK-24P63145 666 aa13.54□□□□□ -0.24
SNORD3C-201ENST00000580533 KIF22Q14807 665 aa13.54□□□□□ -0.24
SNORD3C-201ENST00000580533 SAFBQ15424 915 aaKnown RBP eCLIP13.54□□□□□ -0.24
SNORD3C-201ENST00000580533 MCTP2Q6DN12 878 aa13.54□□□□□ -0.24
SNORD3C-201ENST00000580533 GALNT17Q6IS24 598 aa13.54□□□□□ -0.24
SNORD3C-201ENST00000580533 CPXCR1Q8N123 301 aa13.54□□□□□ -0.24
SNORD3C-201ENST00000580533 CHST13Q8NET6 341 aa13.54□□□□□ -0.24
SNORD3C-201ENST00000580533 CUL5Q93034 780 aa13.54□□□□□ -0.24
SNORD3C-201ENST00000580533 SPATC1LQ9H0A9 340 aa13.54□□□□□ -0.24
SNORD3C-201ENST00000580533 BARHL2Q9NY43 387 aa13.54□□□□□ -0.24
SNORD3C-201ENST00000580533 GJB2P29033 226 aa13.53□□□□□ -0.24
SNORD3C-201ENST00000580533 MAPK4P31152 587 aa13.53□□□□□ -0.24
SNORD3C-201ENST00000580533 CRHR2Q13324 411 aa13.53□□□□□ -0.24
SNORD3C-201ENST00000580533 TMEM132BQ14DG7 1078 aa13.53□□□□□ -0.24
SNORD3C-201ENST00000580533 RIOX2Q8IUF8 465 aa13.53□□□□□ -0.24
SNORD3C-201ENST00000580533 ANKRD13CQ8N6S4 541 aa13.53□□□□□ -0.24
SNORD3C-201ENST00000580533 PIBF1Q8WXW3 757 aa13.53□□□□□ -0.24
SNORD3C-201ENST00000580533 DDX11Q96FC9 970 aa13.53□□□□□ -0.24
SNORD3C-201ENST00000580533 C8orf76Q96K31 380 aa13.53□□□□□ -0.24
SNORD3C-201ENST00000580533 ALG1Q9BT22 464 aa13.53□□□□□ -0.24
SNORD3C-201ENST00000580533 CPVLQ9H3G5 476 aa13.53□□□□□ -0.24
SNORD3C-201ENST00000580533 ACAD9Q9H845 621 aa13.53□□□□□ -0.24
SNORD3C-201ENST00000580533 RAVER2Q9HCJ3 691 aaKnown RBP13.53□□□□□ -0.24
SNORD3C-201ENST00000580533 C6orf50Q9HD87 102 aa13.53□□□□□ -0.24
SNORD3C-201ENST00000580533 MAP3K20Q9NYL2 800 aaKnown RBP13.53□□□□□ -0.24
SNORD3C-201ENST00000580533 ZNF214Q9UL59 606 aaPredicted RBP13.53□□□□□ -0.24
SNORD3C-201ENST00000580533 IVNS1ABPQ9Y6Y0 642 aa13.53□□□□□ -0.24
SNORD3C-201ENST00000580533 A0A0G2JMZ2 1700 aa13.53□□□□□ -0.24
SNORD3C-201ENST00000580533 H3BQV1 296 aa13.52□□□□□ -0.25
SNORD3C-201ENST00000580533 CTDNEP1O95476 244 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms