RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 ATP2C1P98194 919 aaPredicted RBP16.94■□□□□ 0.3
CDK5RAP3-218ENST00000580391 PTGDRQ13258 359 aa16.94■□□□□ 0.3
CDK5RAP3-218ENST00000580391 QRICH1Q2TAL8 776 aa16.94■□□□□ 0.3
CDK5RAP3-218ENST00000580391 GPC2Q8N158 579 aa16.94■□□□□ 0.3
CDK5RAP3-218ENST00000580391 CSRNP2Q9H175 543 aa16.94■□□□□ 0.3
CDK5RAP3-218ENST00000580391 SYNPO2Q9UMS6 1093 aa16.94■□□□□ 0.3
CDK5RAP3-218ENST00000580391 BMP3P12645 472 aa16.93■□□□□ 0.3
CDK5RAP3-218ENST00000580391 CDC37Q16543 378 aaPredicted RBP16.93■□□□□ 0.3
CDK5RAP3-218ENST00000580391 PPP1R18Q6NYC8 613 aa16.93■□□□□ 0.3
CDK5RAP3-218ENST00000580391 REXO1Q8N1G1 1221 aaKnown RBP16.93■□□□□ 0.3
CDK5RAP3-218ENST00000580391 GLIS2Q9BZE0 524 aaPredicted RBP16.93■□□□□ 0.3
CDK5RAP3-218ENST00000580391 DEFB129Q9H1M3 183 aa16.93■□□□□ 0.3
CDK5RAP3-218ENST00000580391 TMEM260Q9NX78 707 aa16.93■□□□□ 0.3
CDK5RAP3-218ENST00000580391 TMX2Q9Y320 296 aa16.93■□□□□ 0.3
CDK5RAP3-218ENST00000580391 PHF20L1A8MW92 1017 aa16.93■□□□□ 0.3
CDK5RAP3-218ENST00000580391 TMEM232C9JQI7 657 aa16.93■□□□□ 0.3
CDK5RAP3-218ENST00000580391 ADCY7P51828 1080 aa16.93■□□□□ 0.3
CDK5RAP3-218ENST00000580391 ZYXQ15942 572 aaKnown RBP16.93■□□□□ 0.3
CDK5RAP3-218ENST00000580391 ANGEL2Q5VTE6 544 aaKnown RBP16.93■□□□□ 0.3
CDK5RAP3-218ENST00000580391 JAKMIP3Q5VZ66 844 aa16.93■□□□□ 0.3
CDK5RAP3-218ENST00000580391 KRT25Q7Z3Z0 450 aa16.93■□□□□ 0.3
CDK5RAP3-218ENST00000580391 SDF4Q9BRK5 362 aa16.93■□□□□ 0.3
CDK5RAP3-218ENST00000580391 BIN2Q9UBW5 565 aaPredicted RBP16.93■□□□□ 0.3
CDK5RAP3-218ENST00000580391 EPS15P42566 896 aa16.92■□□□□ 0.3
CDK5RAP3-218ENST00000580391 SNAP25P60880 206 aa16.92■□□□□ 0.3
CDK5RAP3-218ENST00000580391 IKQ13123 557 aaPredicted RBP16.92■□□□□ 0.3
CDK5RAP3-218ENST00000580391 NBPF12Q5TAG4 269 aaPredicted RBP16.92■□□□□ 0.3
CDK5RAP3-218ENST00000580391 SASS6Q6UVJ0 657 aa16.92■□□□□ 0.3
CDK5RAP3-218ENST00000580391 USP49Q70CQ1 688 aa16.92■□□□□ 0.3
CDK5RAP3-218ENST00000580391 ZNF579Q8NAF0 562 aaKnown RBP16.92■□□□□ 0.3
CDK5RAP3-218ENST00000580391 RNF181Q9P0P0 153 aa16.92■□□□□ 0.3
CDK5RAP3-218ENST00000580391 KCNH3Q9ULD8 1083 aa16.92■□□□□ 0.3
CDK5RAP3-218ENST00000580391 A0A087WWV3 80 aa16.91■□□□□ 0.3
CDK5RAP3-218ENST00000580391 ASNSP08243 561 aa16.91■□□□□ 0.3
CDK5RAP3-218ENST00000580391 NONOQ15233 471 aaKnown RBP eCLIP16.91■□□□□ 0.3
CDK5RAP3-218ENST00000580391 SYDE2Q5VT97 1194 aa16.91■□□□□ 0.3
CDK5RAP3-218ENST00000580391 GOPCQ9HD26 462 aa16.91■□□□□ 0.3
CDK5RAP3-218ENST00000580391 GGA3Q9NZ52 723 aa16.91■□□□□ 0.3
CDK5RAP3-218ENST00000580391 UBE2SQ16763 222 aa16.91■□□□□ 0.3
CDK5RAP3-218ENST00000580391 ANO6Q4KMQ2 910 aa16.91■□□□□ 0.3
CDK5RAP3-218ENST00000580391 FAM83BQ5T0W9 1011 aa16.91■□□□□ 0.3
CDK5RAP3-218ENST00000580391 FERMT2Q96AC1 680 aa16.91■□□□□ 0.3
CDK5RAP3-218ENST00000580391 TIGD1Q96MW7 591 aa16.91■□□□□ 0.3
CDK5RAP3-218ENST00000580391 VCPKMTQ9H867 229 aa16.91■□□□□ 0.3
CDK5RAP3-218ENST00000580391 FAM13BQ9NYF5 915 aa16.91■□□□□ 0.3
CDK5RAP3-218ENST00000580391 PHIPQ8WWQ0 1821 aa16.9■□□□□ 0.3
CDK5RAP3-218ENST00000580391 VWA3AA6NCI4 1184 aa16.9■□□□□ 0.3
CDK5RAP3-218ENST00000580391 DDNO94850 711 aaPredicted RBP16.9■□□□□ 0.3
CDK5RAP3-218ENST00000580391 TAL1P17542 331 aaPredicted RBP16.9■□□□□ 0.3
CDK5RAP3-218ENST00000580391 HIRAP54198 1017 aaPredicted RBP16.9■□□□□ 0.3
CDK5RAP3-218ENST00000580391 APOBEC3FQ8IUX4 373 aaKnown RBP16.9■□□□□ 0.3
CDK5RAP3-218ENST00000580391 C4orf32Q8N8J7 132 aa16.9■□□□□ 0.3
CDK5RAP3-218ENST00000580391 RIC8AQ9NPQ8 531 aa16.9■□□□□ 0.3
CDK5RAP3-218ENST00000580391 IL17AQ16552 155 aa16.89■□□□□ 0.3
CDK5RAP3-218ENST00000580391 PRAMEF18Q5VWM3 479 aa16.89■□□□□ 0.3
CDK5RAP3-218ENST00000580391 BTNL9Q6UXG8 535 aa16.89■□□□□ 0.3
CDK5RAP3-218ENST00000580391 TBCKQ8TEA7 893 aa16.89■□□□□ 0.3
CDK5RAP3-218ENST00000580391 EPSTI1Q96J88 318 aa16.89■□□□□ 0.3
CDK5RAP3-218ENST00000580391 DNAJC25Q9H1X3 360 aa16.89■□□□□ 0.3
CDK5RAP3-218ENST00000580391 TMEM60Q9H2L4 133 aa16.89■□□□□ 0.3
CDK5RAP3-218ENST00000580391 SSC5DA1L4H1 1573 aa16.89■□□□□ 0.29
CDK5RAP3-218ENST00000580391 PARP14Q460N5 1801 aa16.89■□□□□ 0.29
CDK5RAP3-218ENST00000580391 STAT2P52630 851 aa16.89■□□□□ 0.29
CDK5RAP3-218ENST00000580391 LETM2Q2VYF4 491 aa16.89■□□□□ 0.29
CDK5RAP3-218ENST00000580391 LONRF3Q496Y0 759 aa16.89■□□□□ 0.29
CDK5RAP3-218ENST00000580391 NEK8Q86SG6 692 aa16.89■□□□□ 0.29
CDK5RAP3-218ENST00000580391 PDILTQ8N807 584 aa16.89■□□□□ 0.29
CDK5RAP3-218ENST00000580391 SYMPKQ92797 1274 aaKnown RBP16.89■□□□□ 0.29
CDK5RAP3-218ENST00000580391 CUL5Q93034 780 aa16.89■□□□□ 0.29
CDK5RAP3-218ENST00000580391 ZNF341Q9BYN7 854 aa16.89■□□□□ 0.29
CDK5RAP3-218ENST00000580391 SH2D4AQ9H788 454 aa16.89■□□□□ 0.29
CDK5RAP3-218ENST00000580391 PRR12Q9ULL5 1215 aa16.89■□□□□ 0.29
CDK5RAP3-218ENST00000580391 PCDHA1Q9Y5I3 950 aa16.89■□□□□ 0.29
CDK5RAP3-218ENST00000580391 A0A087X0B3 334 aa16.88■□□□□ 0.29
CDK5RAP3-218ENST00000580391 POLR2DO15514 142 aaKnown RBP16.88■□□□□ 0.29
CDK5RAP3-218ENST00000580391 INPP5BP32019 993 aa16.88■□□□□ 0.29
CDK5RAP3-218ENST00000580391 CLK2P49760 499 aaKnown RBP16.88■□□□□ 0.29
CDK5RAP3-218ENST00000580391 STX1AQ16623 288 aa16.88■□□□□ 0.29
CDK5RAP3-218ENST00000580391 KRBA2Q6ZNG9 492 aa16.88■□□□□ 0.29
CDK5RAP3-218ENST00000580391 FAM200AQ8TCP9 573 aa16.88■□□□□ 0.29
CDK5RAP3-218ENST00000580391 KIAA1468Q9P260 1216 aa16.88■□□□□ 0.29
CDK5RAP3-218ENST00000580391 FZD1Q9UP38 647 aa16.88■□□□□ 0.29
CDK5RAP3-218ENST00000580391 USH1GQ495M9 461 aa16.88■□□□□ 0.29
CDK5RAP3-218ENST00000580391 C11orf57Q6ZUT1 292 aaPredicted RBP16.88■□□□□ 0.29
CDK5RAP3-218ENST00000580391 CNNM3Q8NE01 707 aa16.88■□□□□ 0.29
CDK5RAP3-218ENST00000580391 FEZ1Q99689 392 aa16.88■□□□□ 0.29
CDK5RAP3-218ENST00000580391 OTOFQ9HC10 1997 aa16.87■□□□□ 0.29
CDK5RAP3-218ENST00000580391 CCNT1O60563 726 aaKnown RBP16.87■□□□□ 0.29
CDK5RAP3-218ENST00000580391 C9orf131Q5VYM1 1079 aa16.87■□□□□ 0.29
CDK5RAP3-218ENST00000580391 ARL6IP4Q66PJ3 421 aaKnown RBP16.87■□□□□ 0.29
CDK5RAP3-218ENST00000580391 FBXO11Q86XK2 927 aa16.87■□□□□ 0.29
CDK5RAP3-218ENST00000580391 AMNQ9BXJ7 453 aa16.87■□□□□ 0.29
CDK5RAP3-218ENST00000580391 PSTPIP2Q9H939 334 aa16.87■□□□□ 0.29
CDK5RAP3-218ENST00000580391 SERTAD1Q9UHV2 236 aa16.87■□□□□ 0.29
CDK5RAP3-218ENST00000580391 FOXN1O15353 648 aa16.86■□□□□ 0.29
CDK5RAP3-218ENST00000580391 CTNND1O60716 968 aaKnown RBP16.86■□□□□ 0.29
CDK5RAP3-218ENST00000580391 PNOCQ13519 176 aa16.86■□□□□ 0.29
CDK5RAP3-218ENST00000580391 DCAF15Q66K64 600 aa16.86■□□□□ 0.29
CDK5RAP3-218ENST00000580391 ANP32BQ92688 251 aaKnown RBP16.86■□□□□ 0.29
CDK5RAP3-218ENST00000580391 CBX8Q9HC52 389 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms