RNA–Protein interactions for RNA: ENST00000580012.1

NDEL1-207, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3

Gene NDEL1, Length 790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-207ENST00000580012 CPXCR1Q8N123 301 aa26.45■■□□□ 1.82
NDEL1-207ENST00000580012 SRBD1Q8N5C6 995 aaKnown RBP26.45■■□□□ 1.82
NDEL1-207ENST00000580012 SPZ1Q9BXG8 430 aa26.45■■□□□ 1.82
NDEL1-207ENST00000580012 MROH8Q9H579 483 aa26.45■■□□□ 1.82
NDEL1-207ENST00000580012 NID2Q14112 1375 aa26.45■■□□□ 1.82
NDEL1-207ENST00000580012 FMNL1O95466 1100 aaPredicted RBP26.44■■□□□ 1.82
NDEL1-207ENST00000580012 ICAM1P05362 532 aa26.44■■□□□ 1.82
NDEL1-207ENST00000580012 ERCC3P19447 782 aa26.44■■□□□ 1.82
NDEL1-207ENST00000580012 COPB2P35606 906 aa26.44■■□□□ 1.82
NDEL1-207ENST00000580012 AK2P54819 239 aa26.44■■□□□ 1.82
NDEL1-207ENST00000580012 PLS1Q14651 629 aa26.44■■□□□ 1.82
NDEL1-207ENST00000580012 ANKRD1Q15327 319 aa26.44■■□□□ 1.82
NDEL1-207ENST00000580012 TMTC3Q6ZXV5 915 aa26.44■■□□□ 1.82
NDEL1-207ENST00000580012 CCDC144CPQ8IYA2 1237 aa26.44■■□□□ 1.82
NDEL1-207ENST00000580012 IL27Q8NEV9 243 aa26.44■■□□□ 1.82
NDEL1-207ENST00000580012 AGBL1Q96MI9 1066 aa26.44■■□□□ 1.82
NDEL1-207ENST00000580012 RBM28Q9NW13 759 aaKnown RBP26.44■■□□□ 1.82
NDEL1-207ENST00000580012 GJD2Q9UKL4 321 aa26.44■■□□□ 1.82
NDEL1-207ENST00000580012 PNMA2Q9UL42 364 aa26.44■■□□□ 1.82
NDEL1-207ENST00000580012 CTDP1Q9Y5B0 961 aaPredicted RBP26.44■■□□□ 1.82
NDEL1-207ENST00000580012 A0A0G2JMZ2 1700 aa26.43■■□□□ 1.82
NDEL1-207ENST00000580012 PLEKHA8P1O95397 391 aa26.43■■□□□ 1.82
NDEL1-207ENST00000580012 FUT2Q10981 343 aa26.43■■□□□ 1.82
NDEL1-207ENST00000580012 RTN1Q16799 776 aa26.43■■□□□ 1.82
NDEL1-207ENST00000580012 SNRNP48Q6IEG0 339 aaKnown RBP26.43■■□□□ 1.82
NDEL1-207ENST00000580012 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.43■■□□□ 1.82
NDEL1-207ENST00000580012 OTOP1Q7RTM1 612 aa26.43■■□□□ 1.82
NDEL1-207ENST00000580012 GPR142Q7Z601 462 aa26.43■■□□□ 1.82
NDEL1-207ENST00000580012 VAT1LQ9HCJ6 419 aa26.43■■□□□ 1.82
NDEL1-207ENST00000580012 GOLGA8AA7E2F4 631 aa26.42■■□□□ 1.82
NDEL1-207ENST00000580012 GOLGA8BA8MQT2 603 aa26.42■■□□□ 1.82
NDEL1-207ENST00000580012 CDC27P30260 824 aa26.42■■□□□ 1.82
NDEL1-207ENST00000580012 RABEP1Q15276 862 aa26.42■■□□□ 1.82
NDEL1-207ENST00000580012 CDC37Q16543 378 aaPredicted RBP26.42■■□□□ 1.82
NDEL1-207ENST00000580012 TKFCQ3LXA3 575 aa26.42■■□□□ 1.82
NDEL1-207ENST00000580012 CCDC174Q6PII3 467 aa26.42■■□□□ 1.82
NDEL1-207ENST00000580012 PLEKHH3Q7Z736 793 aa26.42■■□□□ 1.82
NDEL1-207ENST00000580012 CTU1Q7Z7A3 348 aaKnown RBP26.42■■□□□ 1.82
NDEL1-207ENST00000580012 LARP6Q9BRS8 491 aaKnown RBP26.42■■□□□ 1.82
NDEL1-207ENST00000580012 TPCN1Q9ULQ1 816 aa26.42■■□□□ 1.82
NDEL1-207ENST00000580012 PARP14Q460N5 1801 aa26.42■■□□□ 1.82
NDEL1-207ENST00000580012 CCDC85CA6NKD9 419 aa26.41■■□□□ 1.82
NDEL1-207ENST00000580012 TNPO2O14787 897 aaKnown RBP26.41■■□□□ 1.82
NDEL1-207ENST00000580012 STRNO43815 780 aa26.41■■□□□ 1.82
NDEL1-207ENST00000580012 HOXD10P28358 340 aa26.41■■□□□ 1.82
NDEL1-207ENST00000580012 ADD1P35611 737 aaKnown RBP26.41■■□□□ 1.82
NDEL1-207ENST00000580012 METAP2P50579 478 aaKnown RBP eCLIP26.41■■□□□ 1.82
NDEL1-207ENST00000580012 QRICH1Q2TAL8 776 aa26.41■■□□□ 1.82
NDEL1-207ENST00000580012 NCAPG2Q86XI2 1143 aa26.41■■□□□ 1.82
NDEL1-207ENST00000580012 USP6NLQ92738 828 aa26.41■■□□□ 1.82
NDEL1-207ENST00000580012 SRRDQ9UH36 339 aa26.41■■□□□ 1.82
NDEL1-207ENST00000580012 CCDC196A0A1B0GTZ2 297 aa26.4■■□□□ 1.82
NDEL1-207ENST00000580012 ZBTB5O15062 677 aa26.4■■□□□ 1.82
NDEL1-207ENST00000580012 PTPREP23469 700 aa26.4■■□□□ 1.82
NDEL1-207ENST00000580012 PRMT2P55345 433 aa26.4■■□□□ 1.82
NDEL1-207ENST00000580012 MORN1Q5T089 497 aa26.4■■□□□ 1.82
NDEL1-207ENST00000580012 CCAR1Q8IX12 1150 aaKnown RBP26.4■■□□□ 1.82
NDEL1-207ENST00000580012 ABRAQ8N0Z2 381 aa26.4■■□□□ 1.82
NDEL1-207ENST00000580012 CHST13Q8NET6 341 aa26.4■■□□□ 1.82
NDEL1-207ENST00000580012 COA7Q96BR5 231 aa26.4■■□□□ 1.82
NDEL1-207ENST00000580012 TRIM17Q9Y577 477 aa26.4■■□□□ 1.82
NDEL1-207ENST00000580012 ECM2O94769 699 aaPredicted RBP26.39■■□□□ 1.82
NDEL1-207ENST00000580012 CMTR1Q8N1G2 835 aaKnown RBP26.39■■□□□ 1.82
NDEL1-207ENST00000580012 PIGSQ96S52 555 aa26.39■■□□□ 1.82
NDEL1-207ENST00000580012 MCOLN1Q9GZU1 580 aa26.39■■□□□ 1.82
NDEL1-207ENST00000580012 CCPG1Q9ULG6 757 aa26.39■■□□□ 1.82
NDEL1-207ENST00000580012 NAP1L2Q9ULW6 460 aaPredicted RBP26.39■■□□□ 1.82
NDEL1-207ENST00000580012 PNMA6FA0A0J9YX94 578 aa26.38■■□□□ 1.81
NDEL1-207ENST00000580012 SLC15A5A6NIM6 579 aa26.38■■□□□ 1.81
NDEL1-207ENST00000580012 DHX16O60231 1041 aaKnown RBP26.38■■□□□ 1.81
NDEL1-207ENST00000580012 PPP1R11O60927 126 aaPredicted RBP26.38■■□□□ 1.81
NDEL1-207ENST00000580012 GRB14Q14449 540 aa26.38■■□□□ 1.81
NDEL1-207ENST00000580012 NTRK3Q16288 839 aa26.38■■□□□ 1.81
NDEL1-207ENST00000580012 FBXO40Q9UH90 709 aa26.38■■□□□ 1.81
NDEL1-207ENST00000580012 GABRQQ9UN88 632 aa26.38■■□□□ 1.81
NDEL1-207ENST00000580012 PFKFB2O60825 505 aa26.37■■□□□ 1.81
NDEL1-207ENST00000580012 PKN2Q16513 984 aaKnown RBP26.37■■□□□ 1.81
NDEL1-207ENST00000580012 TRERF1Q96PN7 1200 aa26.37■■□□□ 1.81
NDEL1-207ENST00000580012 PTPN22Q9Y2R2 807 aa26.37■■□□□ 1.81
NDEL1-207ENST00000580012 ALAS1P13196 640 aa26.36■■□□□ 1.81
NDEL1-207ENST00000580012 FLT3LGP49771 235 aa26.36■■□□□ 1.81
NDEL1-207ENST00000580012 PRKCZQ05513 592 aa26.36■■□□□ 1.81
NDEL1-207ENST00000580012 IRF5Q13568 498 aa26.36■■□□□ 1.81
NDEL1-207ENST00000580012 FBXO11Q86XK2 927 aa26.36■■□□□ 1.81
NDEL1-207ENST00000580012 CLEC4DQ8WXI8 215 aa26.36■■□□□ 1.81
NDEL1-207ENST00000580012 RRP36Q96EU6 259 aaKnown RBP26.36■■□□□ 1.81
NDEL1-207ENST00000580012 AMNQ9BXJ7 453 aa26.36■■□□□ 1.81
NDEL1-207ENST00000580012 RNF146Q9NTX7 359 aa26.36■■□□□ 1.81
NDEL1-207ENST00000580012 FCER1AP12319 257 aa26.35■■□□□ 1.81
NDEL1-207ENST00000580012 TAL1P17542 331 aaPredicted RBP26.35■■□□□ 1.81
NDEL1-207ENST00000580012 CCT2P78371 535 aaKnown RBP26.35■■□□□ 1.81
NDEL1-207ENST00000580012 ME3Q16798 604 aa26.35■■□□□ 1.81
NDEL1-207ENST00000580012 WDR78Q5VTH9 848 aa26.35■■□□□ 1.81
NDEL1-207ENST00000580012 CCDC82Q8N4S0 544 aa26.35■■□□□ 1.81
NDEL1-207ENST00000580012 SOCS4Q8WXH5 440 aa26.35■■□□□ 1.81
NDEL1-207ENST00000580012 NUDT12Q9BQG2 462 aa26.35■■□□□ 1.81
NDEL1-207ENST00000580012 ACAD9Q9H845 621 aa26.35■■□□□ 1.81
NDEL1-207ENST00000580012 NCOA5Q9HCD5 579 aaKnown RBP26.35■■□□□ 1.81
NDEL1-207ENST00000580012 IVNS1ABPQ9Y6Y0 642 aa26.35■■□□□ 1.81
NDEL1-207ENST00000580012 HOXC6P09630 235 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms